vOTU vOTU-030185

vOTU: vOTU-030185

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-030185
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-02014 → vOTU-030185
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1421358
Biosample ID	SAMN05414982
Genome length (bp)	35,681 bps
CheckV completeness	79.37% (Medium-quality)
CDS count	53
CDS density	91.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715	Total connections	27	Host agreement	74.07
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1421358_3	K00390	62.8	2.2e-18	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1421358_3	phrog_424	97.4	1.5e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1421358_3	UniRef90_A0A843HLZ2	318.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1421358_3	1410650.JHWL01000037_gene595	266.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1421358_3	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1421358_3	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1421358_3	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_4	phrog_22292	75.3	6.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1421358_4	526218.Sterm_0798	60.8	0.000000000259	N/A	N/A
PHROG	UHGV-1421358_5	phrog_22292	87.2	1.5e-25	N/A	unknown function
PHROG	UHGV-1421358_6	phrog_3878	49.4	0.000000000000089	N/A	unknown function
KOfam	UHGV-1421358_9	K07171	77.1	3.6e-22	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-1421358_9	phrog_1936	123.6	1.3e-36	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1421358_9	UniRef90_A0A1C5MWG4	140.0	2.36e-39	mRNA interferase MazF4	N/A
eggNOG-mapper	UHGV-1421358_9	411459.RUMOBE_01744	89.4	3.06e-20	PemK-like, MazF-like toxin of type II toxin-antitoxin system	N/A
Pfam	UHGV-1421358_9	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-1421358_9	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-1421358_9	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_10	phrog_1156	316.7	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1421358_10	UniRef90_D7GNU9	873.0	0	Phage/plasmid primase, P4 family, C-terminal domain	N/A
eggNOG-mapper	UHGV-1421358_10	431943.CKL_3236	300.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1421358_10	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1421358_10	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1421358_10	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1421358_10	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1421358_10	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1421358_10	PF08706,PF05272,PF02257,MF_04000,NF005477,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-1421358_11	K00558	157.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1421358_11	phrog_116	162.5	0	DNA methyltransferase	other
UniRef90	UHGV-1421358_11	UniRef90_G9WTJ8	318.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1421358_11	1408415.JHXL01000003_gene1146	233.0	0	COG0270 Site-specific DNA methylase	N/A
PADLOC	UHGV-1421358_11	MTase_II_00058	177.3	0	Type II methyltransferase	RM
Pfam	UHGV-1421358_11	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1421358_11	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1421358_11	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1421358_11	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1421358_13	K00558	50.9	0.000000000000016	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1421358_13	phrog_16427	128.6	4.1e-38	DNA methyltransferase	other
UniRef90	UHGV-1421358_13	UniRef90_A0A1F1HC26	145.0	7.79122e-43	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1421358_13	365659.smi_0434	142.0	2.71e-39	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1421358_13	oMTase_00023	68.4	1.8e-19	orphan methyltransferase	RM
Pfam	UHGV-1421358_13	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1421358_13	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
UniRef90	UHGV-1421358_20	UniRef90_UPI001D08D6B6	106.0	5.2e-25	DNA-packaging protein	N/A
COG	UHGV-1421358_24	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1421358_25	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421358_26	UniRef90_UPI0011069CF0	84.3	4.35e-20	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1421358_26	1121334.KB911068_gene2311	83.2	2.09e-20	N/A	N/A
Pfam	UHGV-1421358_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1421358_26	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1421358_27	K06400	196.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1421358_27	phrog_95	181.8	0	integrase	integration and excision
UniRef90	UHGV-1421358_27	UniRef90_A0A1C5MXG4	423.0	0	Transposon Tn3 resolvase	N/A
eggNOG-mapper	UHGV-1421358_27	697329.Rumal_3466	313.0	0	resolvase	N/A
Pfam	UHGV-1421358_27	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1421358_27	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1421358_27	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1421358_27	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_28	phrog_38	194.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1421358_28	UniRef90_A0A810QA10	662.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1421358_28	1298920.KI911353_gene2682	461.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1421358_28	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1421358_28	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421358_28	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_29	phrog_64	229.9	0	portal protein	head and packaging
UniRef90	UHGV-1421358_29	UniRef90_A0A1C5MXM2	726.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1421358_29	1121866.AUGK01000003_gene1429	414.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1421358_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1421358_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_31	phrog_544	91.7	5.5e-27	major head protein	head and packaging
UniRef90	UHGV-1421358_31	UniRef90_A0A6N3FT63	147.0	1.96e-39	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-1421358_31	428127.EUBDOL_01555	259.0	0	N/A	N/A
structural_annotation	UHGV-1421358_31	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421358_32	UniRef90_D7GNV9	164.0	0	Phage QLRG family, putative DNA packaging	N/A
eggNOG-mapper	UHGV-1421358_32	1298920.KI911353_gene2658	60.8	0.000000000131	N/A	N/A
Pfam	UHGV-1421358_32	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1421358_32	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421358_33	1121866.AUGK01000003_gene1432	92.8	2.55e-22	N/A	N/A
eggNOG-mapper	UHGV-1421358_34	476272.RUMHYD_01963	68.6	0.000000000005	N/A	N/A
eggNOG-mapper	UHGV-1421358_35	1121333.JMLH01000047_gene1014	58.5	0.00000000562	N/A	N/A
structural_annotation	UHGV-1421358_35	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_36	phrog_158	69.5	6.8e-20	major tail protein	tail
UniRef90	UHGV-1421358_36	UniRef90_D7GNW1	220.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1421358_36	1158607.UAU_01767	74.7	0.00000000000000499	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1421358_36	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1421358_36	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421358_37	UniRef90_A0A1C0ADY7	146.0	1.44334e-43	N/A	N/A
eggNOG-mapper	UHGV-1421358_37	469596.HMPREF9488_01311	92.8	4.6e-23	N/A	N/A
Pfam	UHGV-1421358_37	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1421358_37	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421358_38	1121333.JMLH01000047_gene1011	87.8	2.53e-20	N/A	N/A
PHROG	UHGV-1421358_39	phrog_1535	144.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1421358_39	UniRef90_A0A1C6L0H4	690.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1421358_39	1121866.AUGK01000003_gene1437	350.0	0	phage tail tape measure protein	N/A
COG	UHGV-1421358_39	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1421358_40	phrog_1194	90.7	1.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1421358_40	1298920.KI911353_gene4840	115.0	1.99e-31	N/A	N/A
Pfam	UHGV-1421358_40	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1421358_40	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_41	phrog_13879	349.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1421358_41	742740.HMPREF9474_03516	310.0	0	N/A	N/A
structural_annotation	UHGV-1421358_41	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_42	phrog_18725	63.9	2.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1421358_42	585501.HMPREF6123_0822	99.0	1.11e-24	N/A	N/A
PHROG	UHGV-1421358_43	phrog_25620	46.5	0.0000000000004	tail collar fiber protein	tail
PHROG	UHGV-1421358_45	phrog_5302	299.9	0	tail protein	tail
UniRef90	UHGV-1421358_45	UniRef90_A0A564WU27	566.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-1421358_45	742740.HMPREF9474_02337	340.0	0	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1421358_45	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
KOfam	UHGV-1421358_46	K00986	141.9	6.39973e-42	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1421358_46	phrog_1423	320.5	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1421358_46	UniRef90_UPI00189C54DF	594.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1421358_46	742740.HMPREF9474_02336	441.0	0	COG COG3344 Retron-type reverse transcriptase	N/A
PADLOC	UHGV-1421358_46	icity0040	119.9	3.4e-35	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1421358_46	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1421358_46	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1421358_46	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-1421358_47	phrog_18126	108.3	2.7e-32	N/A	unknown function
NCBIFam	UHGV-1421358_48	NF040910.1	N/A	N/A	CD1375 family protein	N/A
eggNOG-mapper	UHGV-1421358_49	1211844.CBLM010000023_gene975	58.2	0.00000000125	N/A	N/A
PHROG	UHGV-1421358_50	phrog_33625	64.4	1.4e-18	holin	lysis
UniRef90	UHGV-1421358_50	UniRef90_A0A6N3AF02	145.0	1.20512e-43	Bacteriophage holin	N/A
eggNOG-mapper	UHGV-1421358_50	665959.HMPREF1013_00186	117.0	3.41e-33	Bacteriophage holin	N/A
Pfam	UHGV-1421358_50	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1421358_50	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1421358_50	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421358_50	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1421358_51	K01448	120.4	1.9e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1421358_51	phrog_435	178.3	0	endolysin	lysis
UniRef90	UHGV-1421358_51	UniRef90_B0G4K0	241.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1421358_51	411461.DORFOR_01187	241.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1421358_51	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1421358_51	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1421358_51	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1421358_51	PF01520,PF01471,MF_00562,TIGR02883,NF038080,COG0860,COG3409	N/A	N/A	N/A	N/A
KOfam	UHGV-1421358_52	K10804	72.3	8.7e-21	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
UniRef90	UHGV-1421358_52	UniRef90_A0A373I6P3	347.0	0	SGNH_hydro domain-containing protein	N/A
eggNOG-mapper	UHGV-1421358_52	1230342.CTM_06586	87.0	9.66e-19	GDSL-like Lipase/Acylhydrolase	N/A
Pfam	UHGV-1421358_52	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-1421358_52	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
structural_annotation	UHGV-1421358_52	PF14606,NF007819,COG2755	N/A	N/A	N/A	N/A
KOfam	UHGV-1421358_53	K18908	46.9	0.00000000000031	mepA; multidrug efflux pump	N/A
PHROG	UHGV-1421358_53	phrog_6241	86.4	3.2e-25	N/A	unknown function
UniRef90	UHGV-1421358_53	UniRef90_A0A174UQL2	134.0	4.88e-38	Multidrug efflux protein	N/A
eggNOG-mapper	UHGV-1421358_53	1121296.JONJ01000002_gene1260	167.0	0	N/A	N/A
Pfam	UHGV-1421358_53	PF01554	N/A	N/A	MatE	MatE
COG	UHGV-1421358_53	COG0534	N/A	N/A	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1421358	Yes	35,681	41	79	1
UHGV-1460751	No	35,582	40	79	1
UHGV-0194887	No	21,860	41	48	1