vOTU vOTU-030307

vOTU: vOTU-030307

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-030307
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-00514 → vOTU-030307
Host lineage
Host range breadth
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0258363
Biosample ID	SAMN06164566
Genome length (bp)	32,212 bps
CheckV completeness	70.88% (Medium-quality)
CDS count	45
CDS density	93.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0258363_1	K18959	78.2	8.3e-23	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-0258363_1	phrog_16	81.1	1.4e-23	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0258363_1	UniRef90_R7FBH8	121.0	1.98e-31	Helicase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0258363_1	1449050.JNLE01000003_gene3908	182.0	0	Type III restriction protein res subunit	N/A
Pfam	UHGV-0258363_1	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0258363_1	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
PHROG	UHGV-0258363_2	phrog_9298	269.8	0	radical SAM domain protein	other
UniRef90	UHGV-0258363_2	UniRef90_A0A2Z4QA35	324.0	0	Putative radical SAM domain protein	N/A
eggNOG-mapper	UHGV-0258363_2	1235800.C819_00846	307.0	0	N/A	N/A
COG	UHGV-0258363_2	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
PHROG	UHGV-0258363_3	phrog_1252	293.4	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0258363_3	UniRef90_A0A849CVC4	885.0	0	DNA polymerase elongation subunit (Family B)	N/A
eggNOG-mapper	UHGV-0258363_3	1121866.AUGK01000003_gene1403	422.0	0	DNA replication proofreading	N/A
Pfam	UHGV-0258363_3	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0258363_3	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-0258363_3	PF04404,PF08490,MF_04010,NF004416	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_4	phrog_434	103.5	2.1e-30	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0258363_4	UniRef90_R6N9M4	601.0	0	Phage-related protein predicted endonuclease	N/A
eggNOG-mapper	UHGV-0258363_4	1219626.HMPREF1639_07320	363.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0258363_4	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-0258363_4	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0258363_4	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0258363_5	cluster_73853	38.9	0.0000000238	NA	N/A
structural_annotation	UHGV-0258363_8	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_9	phrog_18716	153.9	0	N/A	unknown function
UniRef90	UHGV-0258363_9	UniRef90_A0A7X7HJW5	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0258363_9	1029718.SFBM_0379	129.0	4.22e-36	N/A	N/A
Pfam	UHGV-0258363_9	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0258363_9	PF18909	N/A	N/A	N/A	N/A
KOfam	UHGV-0258363_10	K03698	43.5	0.0000000000047	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0258363_10	phrog_28876	101.0	9.4e-30	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0258363_10	UniRef90_A0A1C6EYG8	273.0	0	Predicted HD-superfamily hydrolase	N/A
eggNOG-mapper	UHGV-0258363_10	1219626.HMPREF1639_07345	165.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0258363_10	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0258363_10	PF21447,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_11	phrog_16126	82.5	1.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0258363_11	665950.HMPREF1025_01978	58.5	0.00000000204	N/A	N/A
structural_annotation	UHGV-0258363_13	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_14	phrog_1829	151.2	5.60519e-45	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0258363_14	UniRef90_R6P545	451.0	0	Primase C terminal 1 (PriCT-1)./Bifunctional DNA primase/polymerase N-terminal	N/A
eggNOG-mapper	UHGV-0258363_14	1121866.AUGK01000003_gene1409	205.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-0258363_14	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-0258363_14	COG4983	N/A	N/A	Primase-polymerase (Primpol) domain protein	N/A
structural_annotation	UHGV-0258363_14	PF08708,PF09250,COG4983	N/A	N/A	N/A	N/A
KOfam	UHGV-0258363_15	K07171	90.1	3.3e-26	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0258363_15	phrog_1936	128.7	3.5e-38	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0258363_15	UniRef90_A0A1C6L030	135.0	5.03e-38	mRNA interferase EndoA	N/A
eggNOG-mapper	UHGV-0258363_15	1203606.HMPREF1526_00221	107.0	9.52e-28	N/A	N/A
Pfam	UHGV-0258363_15	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0258363_15	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0258363_15	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
KOfam	UHGV-0258363_16	K03465	225.5	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0258363_16	phrog_85	139.6	1.29998e-41	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0258363_16	UniRef90_R6MZ76	381.0	0	Flavin-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0258363_16	665956.HMPREF1032_03153	205.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-0258363_16	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0258363_16	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-0258363_16	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
HAMAP	UHGV-0258363_16	MF_01408	N/A	N/A	Flavin-dependent thymidylate synthase [thyX]	N/A
structural_annotation	UHGV-0258363_16	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-0258363_20	K07450	41.0	0.00000000002	K07450; putative resolvase	N/A
UniRef90	UHGV-0258363_20	UniRef90_UPI00195D79B5	62.4	0.0000000000849	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0258363_20	748671.LCRIS_00589	72.8	0.0000000000000293	Resolvase, N-terminal	N/A
Pfam	UHGV-0258363_20	PF13411	N/A	N/A	MerR HTH family regulatory protein	MerR_1
COG	UHGV-0258363_20	COG2452	N/A	N/A	Predicted site-specific integrase-resolvase	N/A
PHROG	UHGV-0258363_21	phrog_864	202.4	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0258363_21	UniRef90_A0A1M7S6C1	208.0	0	Putative DNA primase/helicase	N/A
eggNOG-mapper	UHGV-0258363_21	1232453.BAIF02000019_gene3935	197.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-0258363_21	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-0258363_21	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0258363_21	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0258363_21	PF05272,PF02257,NF005477,COG3378	N/A	N/A	N/A	N/A
UniRef90	UHGV-0258363_22	UniRef90_A0A0F0C267	63.5	0.0000000107	HTH cro/C1-type domain-containing protein	N/A
PHROG	UHGV-0258363_26	phrog_6244	57.5	3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0258363_26	1354300.AUQY01000005_gene215	110.0	1.66e-30	N/A	N/A
structural_annotation	UHGV-0258363_27	PF09392	N/A	N/A	N/A	N/A
UniRef90	UHGV-0258363_28	UniRef90_A0A417DZ16	58.9	0.00000000109	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0258363_28	PF20075,TIGR02612,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0258363_29	K14060	142.8	2.7003e-42	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0258363_29	phrog_125	166.5	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0258363_29	UniRef90_A0A3D0LYX8	220.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0258363_29	641107.CDLVIII_3188	208.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0258363_29	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0258363_29	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0258363_29	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_31	phrog_38	202.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0258363_31	UniRef90_A0A810QA10	659.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0258363_31	1298920.KI911353_gene2682	473.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0258363_31	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0258363_31	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0258363_31	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_32	phrog_64	253.4	0	portal protein	head and packaging
UniRef90	UHGV-0258363_32	UniRef90_A0A1C6L010	726.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0258363_32	1121866.AUGK01000003_gene1429	446.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0258363_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0258363_32	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0258363_33	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_34	phrog_544	67.8	1.2e-19	major head protein	head and packaging
UniRef90	UHGV-0258363_34	UniRef90_A0A6N3FT63	157.0	3.71344e-43	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0258363_34	428127.EUBDOL_01555	257.0	0	N/A	N/A
structural_annotation	UHGV-0258363_34	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_35	phrog_3673	69.4	3.3e-20	Arc-like repressor	transcription regulation
UniRef90	UHGV-0258363_35	UniRef90_A0A380GBN6	52.0	0.00000081	Rho termination factor domain-containing protein	N/A
eggNOG-mapper	UHGV-0258363_35	1145276.T479_19965	54.3	0.0000000078	N/A	N/A
UniRef90	UHGV-0258363_36	UniRef90_R6N215	173.0	0	Phage QLRG family putative DNA packaging	N/A
eggNOG-mapper	UHGV-0258363_36	1298920.KI911353_gene2658	52.4	0.000000258	N/A	N/A
Pfam	UHGV-0258363_36	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0258363_36	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0258363_37	1121866.AUGK01000003_gene1432	92.4	3.6e-22	N/A	N/A
UniRef90	UHGV-0258363_38	UniRef90_UPI001BBD4500	67.4	0.0000000000608	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0258363_38	476272.RUMHYD_01963	66.6	0.0000000000259	N/A	N/A
eggNOG-mapper	UHGV-0258363_39	1121333.JMLH01000047_gene1014	57.0	0.0000000223	N/A	N/A
structural_annotation	UHGV-0258363_39	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_40	phrog_158	55.6	0.0000000000000011	major tail protein	tail
UniRef90	UHGV-0258363_40	UniRef90_A0A1C6L0H9	228.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0258363_40	1232453.BAIF02000058_gene1634	100.0	2.07e-25	N/A	N/A
structural_annotation	UHGV-0258363_40	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0258363_41	UniRef90_A0A1C0ADY7	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0258363_41	1123263.AUKY01000015_gene1618	95.9	2.89e-24	N/A	N/A
Pfam	UHGV-0258363_41	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0258363_41	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0258363_42	1121333.JMLH01000047_gene1011	86.3	1.23e-19	N/A	N/A
PHROG	UHGV-0258363_43	phrog_1535	162.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0258363_43	UniRef90_A0A318EME6	173.0	1.12e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-0258363_43	1121866.AUGK01000003_gene1437	315.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0258363_43	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
COG	UHGV-0258363_43	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0258363_44	phrog_1194	90.4	1.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0258363_44	742740.HMPREF9474_03515	120.0	1.49e-33	N/A	N/A
structural_annotation	UHGV-0258363_44	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0258363_45	phrog_13879	198.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0258363_45	1235800.C819_00474	236.0	0	N/A	N/A
structural_annotation	UHGV-0258363_45	PF19318,PF16466,MF_00813,NF010371,COG4266	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0258363	Yes	32,212	47	71	1
UHGV-0196995	No	12,020	47	26	1