vOTU vOTU-030809

vOTU: vOTU-030809

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-030809
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00001 → vOTU-030809
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0019876
Biosample ID	N/A
Genome length (bp)	54,556 bps
CheckV completeness	74.44% (Medium-quality)
CDS count	65
CDS density	91.50%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	7	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0019876_1	phrog_256	922.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019876_1	UniRef90_A0A0L8EXE7	636.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0019876_1	1262914.BN533_00796	628.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0019876_1	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0019876_1	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0019876_1	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_2	phrog_36	56.2	6.8e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0019876_2	903814.ELI_1292	62.0	0.000000000449	N/A	N/A
Pfam	UHGV-0019876_2	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0019876_2	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_3	phrog_1689	68.1	1.8e-19	nucleotide kinase	other
UniRef90	UHGV-0019876_3	UniRef90_A0A417W9V0	82.0	4.46e-17	N/A	N/A
eggNOG-mapper	UHGV-0019876_3	411473.RUMCAL_00920	85.9	1.1e-19	N/A	N/A
Pfam	UHGV-0019876_3	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0019876_6	phrog_954	193.8	0	DNA methyltransferase	other
UniRef90	UHGV-0019876_6	UniRef90_A0A810Q0N4	313.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0019876_6	1280698.AUJS01000007_gene1028	280.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0019876_6	MTase_II_00074	198.7	0	Type II methyltransferase	RM
Pfam	UHGV-0019876_6	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0019876_6	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0019876_6	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019876_7	UniRef90_UPI0019D1E2CF	239.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0019876_7	1410632.JHWW01000006_gene695	179.0	0	N/A	N/A
Pfam	UHGV-0019876_7	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0019876_7	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_8	phrog_111	149.4	1.54143e-44	DNA methyltransferase	other
UniRef90	UHGV-0019876_8	UniRef90_A0A6N9P2A7	183.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0019876_8	411468.CLOSCI_00567	177.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0019876_8	oMTase_00015	164.0	0	orphan methyltransferase	RM
Pfam	UHGV-0019876_8	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0019876_8	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_9	phrog_1238	59.4	4.6e-17	phosphoheptose isomerase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0019876_9	411902.CLOBOL_05680	141.0	2.12e-40	UMP catabolic process	N/A
COG	UHGV-0019876_9	COG0647	N/A	N/A	Ribonucleotide monophosphatase NagD, HAD superfamily	N/A
KOfam	UHGV-0019876_11	K14440	77.3	1.7e-34	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0019876_11	phrog_62	367.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019876_11	UniRef90_A0A3G9J1T4	490.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0019876_11	1134413.ANNK01000054_gene2226	487.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-0019876_11	ZorD1_00007	53.9	3.5e-20	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0019876_11	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0019876_11	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0019876_11	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0019876_11	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0019876_13	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
PHROG	UHGV-0019876_17	phrog_22529	71.5	7e-21	N/A	unknown function
UniRef90	UHGV-0019876_17	UniRef90_G4KQA9	167.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0019876_17	693746.OBV_25450	167.0	0	3D domain	N/A
Pfam	UHGV-0019876_17	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0019876_17	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0019876_17	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
KOfam	UHGV-0019876_19	K02334	847.8	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0019876_19	phrog_17	390.7	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019876_19	UniRef90_A0A1M6EZH0	650.0	0	DNA polymerase	N/A
eggNOG-mapper	UHGV-0019876_19	1262449.CP6013_3181	630.0	0	DNA polymerase	N/A
Pfam	UHGV-0019876_19	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0019876_19	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0019876_19	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_20	phrog_872	97.2	1.7e-31	N/A	unknown function
UniRef90	UHGV-0019876_20	UniRef90_A0A8J6M9F5	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019876_20	1519439.JPJG01000060_gene1880	137.0	3.02e-38	N/A	N/A
Pfam	UHGV-0019876_20	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0019876_20	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0019876_20	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_21	phrog_112	186.5	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019876_21	UniRef90_UPI001C1238FC	269.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019876_21	240302.BN982_00208	174.0	0	N/A	N/A
Pfam	UHGV-0019876_21	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0019876_21	PF10991,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_22	phrog_69	297.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019876_22	UniRef90_UPI000CDC8F55	321.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019876_22	1274524.BSONL12_06023	316.0	0	N/A	N/A
Pfam	UHGV-0019876_22	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0019876_22	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0019876_22	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019876_23	1408303.JNJJ01000084_gene2558	54.7	0.000000176	N/A	N/A
UniRef90	UHGV-0019876_25	UniRef90_A0A212LY46	53.9	0.0000000263	DNA-binding protein, excisionase family (Modular protein)	N/A
eggNOG-mapper	UHGV-0019876_25	1131730.BAVI_04754	48.9	0.000000382	PBP superfamily domain	N/A
Pfam	UHGV-0019876_25	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0019876_25	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0019876_25	COG1910	N/A	N/A	Periplasmic molybdate-binding protein/domain	N/A
COG	UHGV-0019876_27	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
KOfam	UHGV-0019876_29	K18830	75.5	7.5e-22	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0019876_29	phrog_8	56.9	3.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019876_29	UniRef90_A0A2U1BEG8	133.0	1.56e-37	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0019876_29	1235797.C816_03553	125.0	1.4e-34	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0019876_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0019876_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0019876_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0019876_31	K14059	231.0	0	int; integrase	N/A
PHROG	UHGV-0019876_31	phrog_1	195.5	0	integrase	integration and excision
UniRef90	UHGV-0019876_31	UniRef90_UPI001C117EE7	373.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0019876_31	1235797.C816_00779	226.0	0	Phage integrase family	N/A
Pfam	UHGV-0019876_31	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0019876_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0019876_31	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0019876_31	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_33	phrog_93	66.5	3.8e-19	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019876_33	UniRef90_A0A242K347	79.0	4.11e-17	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0019876_33	862517.HMPREF9225_0467	72.0	0.00000000000000314	VRR-NUC domain protein	N/A
structural_annotation	UHGV-0019876_33	PF01974,MF_01490,NF011269	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019876_36	TIGR00663,COG0592	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019876_42	PF03869,NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_43	phrog_2412	41.6	0.00000000002	N/A	unknown function
PHROG	UHGV-0019876_44	phrog_38	338.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0019876_44	UniRef90_A0A845QMQ7	491.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0019876_44	755731.Clo1100_2438	427.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0019876_44	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0019876_44	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0019876_44	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0019876_44	COG5362	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-0019876_46	phrog_156	112.2	3.4e-33	portal protein	head and packaging
eggNOG-mapper	UHGV-0019876_46	1408437.JNJN01000001_gene1708	225.0	0	N/A	N/A
structural_annotation	UHGV-0019876_46	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_48	phrog_422	196.7	0	major head protein	head and packaging
UniRef90	UHGV-0019876_48	UniRef90_A0A5D4RB37	300.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0019876_48	755731.Clo1100_2434	285.0	0	N/A	N/A
Pfam	UHGV-0019876_48	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0019876_48	PF19821,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_49	phrog_13046	66.2	4.1e-19	N/A	unknown function
structural_annotation	UHGV-0019876_49	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019876_50	871968.DESME_08885	104.0	1.27e-20	N/A	N/A
structural_annotation	UHGV-0019876_50	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-0019876_52	K08135	58.3	5e-17	COL15A; collagen type XV alpha	N/A
PHROG	UHGV-0019876_52	phrog_6320	66.6	3.4e-19	tail fiber protein	tail
Pfam	UHGV-0019876_52	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0019876_54	phrog_38707	75.8	2.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0019876_54	552398.HMPREF0866_01593	117.0	1.35e-27	tail collar domain protein	N/A
COG	UHGV-0019876_54	COG4675	N/A	N/A	Phage tail collar domain	N/A
eggNOG-mapper	UHGV-0019876_55	1297617.JPJD01000049_gene1300	55.5	0.000000101	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0019876_55	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
COG	UHGV-0019876_57	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
eggNOG-mapper	UHGV-0019876_58	657322.FPR_21910	57.8	0.00000000997	N/A	N/A
Pfam	UHGV-0019876_59	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0019876_59	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0019876_59	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0019876_60	phrog_23092	72.5	4.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0019876_60	1226322.HMPREF1545_00780	74.3	9.21e-16	N/A	N/A
PHROG	UHGV-0019876_61	phrog_1863	53.5	0.0000000000000027	N/A	unknown function
eggNOG-mapper	UHGV-0019876_61	748224.HMPREF9436_01412	86.3	1.96e-21	N/A	N/A
PHROG	UHGV-0019876_62	phrog_13256	84.5	5.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0019876_62	1160721.RBI_I01912	77.4	2.82e-18	N/A	N/A
KOfam	UHGV-0019876_63	K08640	94.7	1.4e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0019876_63	phrog_894	93.7	1.4e-27	endolysin	lysis
UniRef90	UHGV-0019876_63	UniRef90_UPI001C1061EB	240.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0019876_63	1235797.C816_04171	239.0	0	Peptidase M15	N/A
Pfam	UHGV-0019876_63	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0019876_63	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0019876_63	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019876_63	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019876_64	1519439.JPJG01000060_gene1904	62.0	0.000000287	N/A	N/A
PHROG	UHGV-0019876_65	phrog_14770	80.5	3.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0019876_65	1121091.AUMP01000003_gene2597	191.0	1.4013e-45	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-0019876_65	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
Pfam	UHGV-0019876_65	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0019876_65	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0019876_65	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0019876	Yes	54,556	61	74	1
UHGV-0018306	No	38,746	62	52	1