vOTU vOTU-031692

vOTU: vOTU-031692

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-031692
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vOTU-031692
Host lineage
Host range breadth
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0442662
Biosample ID	N/A
Genome length (bp)	22,482 bps
CheckV completeness	65.10% (Medium-quality)
CDS count	41
CDS density	95.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 65.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0442662_7	UniRef90_UPI0005A73BC1	203.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0442662_7	1089548.KI783301_gene2081	209.0	0	Heat shock protein DnaJ domain protein	N/A
COG	UHGV-0442662_7	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0442662_7	PF00226	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_8	K03111	148.7	5.46506e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0442662_8	phrog_44	136.9	1.2e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0442662_8	UniRef90_A0A316LFY0	160.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0442662_8	335541.Swol_2539	130.0	3.82e-37	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0442662_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0442662_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0442662_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0442662_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0442662_8	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0442662_9	phrog_14105	270.3	0	N/A	unknown function
UniRef90	UHGV-0442662_9	UniRef90_A0A489EBT0	124.0	3.8e-30	PPE-repeat proteins	N/A
eggNOG-mapper	UHGV-0442662_9	526218.Sterm_0811	85.1	1.92e-16	dextransucrase activity	N/A
Pfam	UHGV-0442662_9	PF01469	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide_2
COG	UHGV-0442662_9	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-0442662_10	phrog_236	82.8	7.7e-24	nucleotide kinase	other
UniRef90	UHGV-0442662_10	UniRef90_UPI0013022309	92.8	3.89e-23	N/A	N/A
eggNOG-mapper	UHGV-0442662_10	1033743.CAES01000020_gene3148	70.5	0.00000000000000582	N/A	N/A
Pfam	UHGV-0442662_10	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0442662_13	phrog_824	119.6	1.6e-35	N/A	unknown function
UniRef90	UHGV-0442662_13	UniRef90_A0A7G8TE01	114.0	3.68e-30	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0442662_13	1291050.JAGE01000001_gene480	107.0	3.67e-28	VRR_NUC	N/A
Pfam	UHGV-0442662_13	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0442662_13	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0442662_14	phrog_3584	193.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0442662_14	536233.CLO_3655	151.0	2.65994e-41	N/A	N/A
structural_annotation	UHGV-0442662_14	PF21578,NF033538	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_19	K07729	47.3	0.00000000000046	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0442662_19	phrog_8	42.0	0.00000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0442662_19	UniRef90_A0A1P8XLA5	49.3	0.00000292	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0442662_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0442662_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0442662_19	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_20	K22299	45.1	0.0000000000022	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0442662_20	phrog_3	52.9	0.000000000000016	transcriptional repressor	transcription regulation
UniRef90	UHGV-0442662_20	UniRef90_A0A316QIY5	86.3	1.29e-20	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0442662_20	665956.HMPREF1032_03112	79.0	1.26e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-0442662_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0442662_20	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0442662_20	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_21	K07729	42.2	0.000000000016	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0442662_21	phrog_8	63.2	5.6e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0442662_21	UniRef90_UPI001C0ECD6A	92.4	4.27e-23	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0442662_21	665956.HMPREF1032_03117	91.7	1.61e-23	helix-turn-helix	N/A
Pfam	UHGV-0442662_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0442662_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0442662_21	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0442662_24	phrog_8	46.7	0.00000000000069	transcriptional regulator	transcription regulation
UniRef90	UHGV-0442662_24	UniRef90_A0A316MQN7	72.4	0.0000000000000895	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0442662_24	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0442662_24	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0442662_24	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_26	K07729	69.4	7.1e-20	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0442662_26	phrog_3	54.2	0.0000000000000056	transcriptional repressor	transcription regulation
UniRef90	UHGV-0442662_26	UniRef90_A0A7V7ZJW9	61.2	0.000000000374	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0442662_26	1158601.I585_04471	56.6	0.00000000364	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0442662_26	retron_type_VI_hth_cluster2_1	52.3	0.000000000000014	N/A	Retron
Pfam	UHGV-0442662_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0442662_26	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0442662_27	K07339	52.2	0.0000000000000091	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0442662_27	phrog_353	47.1	0.00000000000027	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0442662_27	UniRef90_A0A173T1A3	77.4	2.96e-17	YcfA-like protein	N/A
eggNOG-mapper	UHGV-0442662_27	1235835.C814_03453	73.9	1.43e-16	N/A	N/A
Pfam	UHGV-0442662_27	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
KOfam	UHGV-0442662_28	K18843	81.4	1.5e-23	hicB; antitoxin HicB	N/A
PHROG	UHGV-0442662_28	phrog_497	70.2	3.9e-20	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0442662_28	UniRef90_A0A6N8HUW3	148.0	1.00893e-43	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
eggNOG-mapper	UHGV-0442662_28	1209989.TepiRe1_1140	124.0	5.03e-35	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0442662_28	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0442662_28	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0442662_28	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_29	K14059	92.9	5.2e-27	int; integrase	N/A
PHROG	UHGV-0442662_29	phrog_1	119.7	2.9e-35	integrase	integration and excision
UniRef90	UHGV-0442662_29	UniRef90_UPI001AA1BF73	271.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0442662_29	1507.HMPREF0262_00420	239.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0442662_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0442662_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0442662_29	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0442662_32	phrog_962	71.7	1.1e-20	holin	lysis
UniRef90	UHGV-0442662_32	UniRef90_UPI001655FC48	100.0	4.85e-26	phage holin	N/A
eggNOG-mapper	UHGV-0442662_32	887929.HMP0721_1251	88.2	7.76e-22	Bacteriophage holin	N/A
Pfam	UHGV-0442662_32	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0442662_32	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0442662_32	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0442662_32	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_33	K19303	73.1	5.7e-21	mepH; murein DD-endopeptidase [EC:3.4.-.-]	N/A
PHROG	UHGV-0442662_33	phrog_1493	69.4	0	endolysin	lysis
UniRef90	UHGV-0442662_33	UniRef90_A0A2V2DH14	301.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0442662_33	1444310.JANV01000095_gene3186	152.0	4.33e-39	ErfK YbiS YcfS YnhG family protein	N/A
Pfam	UHGV-0442662_33	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0442662_33	PF09374	N/A	N/A	Predicted Peptidoglycan domain	PG_binding_3
Pfam	UHGV-0442662_33	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0442662_33	PF08823	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_2
NCBIFam	UHGV-0442662_33	NF038080.1	N/A	N/A	peptidoglycan-binding protein	N/A
COG	UHGV-0442662_33	COG1376	N/A	N/A	Lipoprotein-anchoring transpeptidase ErfK/SrfK	N/A
structural_annotation	UHGV-0442662_33	PF00877,PF01471,PF18342,NF033742,TIGR02869,NF033202,COG4991,COG3409,COG0791	N/A	N/A	N/A	N/A
UniRef90	UHGV-0442662_34	UniRef90_A0A351QWQ7	48.5	0.00000117	XkdX family protein	N/A
Pfam	UHGV-0442662_34	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0442662_34	PF09693	N/A	N/A	N/A	N/A
PHROG	UHGV-0442662_35	phrog_300	47.3	0.00000000000033	tail fiber protein	tail
UniRef90	UHGV-0442662_35	UniRef90_UPI0006960C3A	50.1	0.0000058	N/A	N/A
Pfam	UHGV-0442662_35	PF11192	N/A	N/A	N/A	DUF2977
PHROG	UHGV-0442662_37	phrog_23008	81.2	1.90001e-40	tail fiber protein	tail
eggNOG-mapper	UHGV-0442662_37	471874.PROSTU_02546	88.2	0.00000000000000455	Phage tail-collar fibre protein	N/A
COG	UHGV-0442662_37	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0442662_38	PF16774,PF21766,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0442662_39	K10421	51.1	0.000000000000001	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0442662_39	phrog_23464	207.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0442662_39	926561.KB900622_gene636	235.0	0	phage tail tape measure protein	N/A
COG	UHGV-0442662_39	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0442662_39	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0442662_40	phrog_3033	49.4	0.000000000000047	N/A	unknown function
PHROG	UHGV-0442662_41	phrog_709	53.4	0.000000000000005	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0442662	Yes	22,482	49	65	1
UHGV-0275702	No	10,921	48	14	1