vOTU vOTU-032060

vOTU: vOTU-032060

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-032060
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vOTU-032060
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0111245
Biosample ID	N/A
Genome length (bp)	25,799 bps
CheckV completeness	74.06% (Medium-quality)
CDS count	32
CDS density	95.93%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	277	Host agreement	97.47
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	175	Host agreement	92

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0111245_1	K06284	119.5	1.9e-35	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0111245_1	phrog_4681	103.7	6.7e-31	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0111245_1	UniRef90_A0A074LM49	108.0	2.4e-29	AbrB family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0111245_1	1157490.EL26_11905	108.0	4.02e-30	Antidote-toxin recognition MazE, bacterial antitoxin	N/A
Pfam	UHGV-0111245_1	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0111245_1	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0111245_1	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0111245_1	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_4	phrog_3584	129.9	2.1e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0111245_4	411470.RUMGNA_02047	132.0	3.34e-34	N/A	N/A
structural_annotation	UHGV-0111245_4	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0111245_5	K03700	91.2	1.4e-26	recU; recombination protein U	N/A
PHROG	UHGV-0111245_5	phrog_843	138.9	1.90002e-41	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111245_5	UniRef90_A0A1H0W5Y9	172.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0111245_5	537013.CLOSTMETH_01720	152.0	3.78351e-44	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0111245_5	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0111245_5	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0111245_5	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_6	phrog_38338	67.4	2.5e-19	N/A	unknown function
UniRef90	UHGV-0111245_6	UniRef90_UPI00137B3A8C	78.2	8.55e-16	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0111245_6	693746.OBV_25410	92.4	1.17e-22	N/A	N/A
PHROG	UHGV-0111245_7	phrog_8470	460.9	0	N/A	unknown function
UniRef90	UHGV-0111245_7	UniRef90_UPI001C1063FF	268.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0111245_7	1378168.N510_01842	221.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0111245_7	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0111245_7	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_8	phrog_15609	371.2	0	N/A	unknown function
UniRef90	UHGV-0111245_8	UniRef90_A0A7G9WGA3	121.0	3.07e-28	N/A	N/A
eggNOG-mapper	UHGV-0111245_8	1378168.N510_01841	121.0	1.66e-28	N/A	N/A
Pfam	UHGV-0111245_8	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0111245_8	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0111245_8	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_9	phrog_5781	68.4	1.1e-19	N/A	unknown function
UniRef90	UHGV-0111245_9	UniRef90_A0A810Q4L2	111.0	8.12e-29	N/A	N/A
eggNOG-mapper	UHGV-0111245_9	573061.Clocel_3558	81.3	1.37e-17	N/A	N/A
Pfam	UHGV-0111245_9	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0111245_9	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0111245_9	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_11	phrog_36	60.9	2.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0111245_11	UniRef90_UPI001C10AB33	123.0	3.24e-33	N/A	N/A
eggNOG-mapper	UHGV-0111245_11	428125.CLOLEP_01806	105.0	6.6e-27	N/A	N/A
Pfam	UHGV-0111245_11	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0111245_11	PF07374,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111245_12	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0111245_13	K06909	390.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0111245_13	phrog_5653	146.0	2.10195e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0111245_13	UniRef90_A0A416S378	634.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0111245_13	33035.JPJF01000106_gene3136	596.0	0	Terminase small subunit	N/A
Pfam	UHGV-0111245_13	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0111245_13	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0111245_13	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0111245_13	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0111245_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0111245_13	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_14	phrog_1233	94.4	1.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0111245_14	1415774.U728_832	92.8	5.28e-23	N/A	N/A
structural_annotation	UHGV-0111245_14	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_15	phrog_533	215.3	0	portal protein	head and packaging
UniRef90	UHGV-0111245_15	UniRef90_A0A173TY48	344.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0111245_15	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0111245_15	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_16	phrog_581	255.9	0	minor head protein	head and packaging
UniRef90	UHGV-0111245_16	UniRef90_A0A355KVT5	347.0	0	Phage capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-0111245_16	33035.JPJF01000106_gene3134	233.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0111245_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0111245_16	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
COG	UHGV-0111245_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111245_16	PF06152,PF18812	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_17	phrog_194	42.7	0.00000000001	head scaffolding protein	head and packaging
UniRef90	UHGV-0111245_17	UniRef90_UPI001C0EBA51	127.0	3.38e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0111245_17	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-0111245_17	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0111245_17	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_18	phrog_267	54.8	0.0000000000000015	major head protein	head and packaging
eggNOG-mapper	UHGV-0111245_18	1235799.C818_04223	158.0	8.40779e-44	N/A	N/A
structural_annotation	UHGV-0111245_18	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_19	phrog_541	70.3	2.6e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0111245_19	33035.JPJF01000106_gene3131	76.3	0.00000000000000192	N/A	N/A
PHROG	UHGV-0111245_20	phrog_3366	48.7	0.00000000000014	N/A	unknown function
structural_annotation	UHGV-0111245_20	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_21	phrog_556	61.5	2.6e-18	minor head protein	head and packaging
UniRef90	UHGV-0111245_21	UniRef90_A0A1H7MNM8	114.0	1.85e-29	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0111245_21	476272.RUMHYD_01780	112.0	1.37e-29	N/A	N/A
Pfam	UHGV-0111245_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0111245_21	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_22	phrog_3266	63.6	2.9e-18	tail completion	connector
eggNOG-mapper	UHGV-0111245_22	476272.RUMHYD_01781	117.0	4.36e-31	N/A	N/A
structural_annotation	UHGV-0111245_22	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_23	phrog_3099	87.6	1.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0111245_23	693746.OBV_18150	221.0	0	N/A	N/A
structural_annotation	UHGV-0111245_23	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_24	phrog_11299	101.6	7.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0111245_24	1449050.JNLE01000003_gene3883	65.9	0.0000000000142	N/A	N/A
structural_annotation	UHGV-0111245_24	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_25	phrog_706	109.3	3.6e-32	N/A	unknown function
UniRef90	UHGV-0111245_25	UniRef90_UPI00164D7633	177.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0111245_25	693746.OBV_18170	170.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0111245_25	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0111245_25	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_26	phrog_1535	118.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0111245_26	UniRef90_A0A810PX76	107.0	1.83e-20	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0111245_26	1235797.C816_04182	192.0	0	SLT domain	N/A
COG	UHGV-0111245_26	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111245_27	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_28	phrog_6616	72.8	7.2e-22	tail protein	tail
structural_annotation	UHGV-0111245_28	PF13550,PF09931,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0111245_29	phrog_19976	40.5	0.000000000026	tail assembly protein	tail
COG	UHGV-0111245_29	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0111245_29	PF20622	N/A	N/A	N/A	N/A
UniRef90	UHGV-0111245_30	UniRef90_UPI001BF10870	241.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-0111245_30	610130.Closa_0587	84.0	0.0000000000000026	Tyrosine phosphatase family	N/A
Pfam	UHGV-0111245_30	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-0111245_30	COG2365	N/A	N/A	Protein tyrosine/serine phosphatase Oca4	N/A
structural_annotation	UHGV-0111245_30	PF13350,PF18998,PF17425,COG2365	N/A	N/A	N/A	N/A
KOfam	UHGV-0111245_31	K01447	113.0	3.8e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0111245_31	phrog_9611	130.8	1e-38	endolysin	lysis
UniRef90	UHGV-0111245_31	UniRef90_A0A3D1VCL7	436.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0111245_31	97138.C820_00738	231.0	0	Ami_2	N/A
Pfam	UHGV-0111245_31	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0111245_31	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-0111245_31	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0111245_31	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-0111245_32	UniRef90_R5AT18	150.0	7.00649e-45	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0111245_32	742738.HMPREF9460_01388	97.4	9.1e-25	Bacteriophage holin family	N/A
Pfam	UHGV-0111245_32	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
COG	UHGV-0111245_32	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0111245	Yes	25,799	57	74	1
UHGV-0319105	No	11,632	56	33	1