vOTU vOTU-032829

vOTU: vOTU-032829

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-032829
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00383 → vGENUS-01860 → vOTU-032829
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1504725
Biosample ID	N/A
Genome length (bp)	35,216 bps
CheckV completeness	58.96% (Medium-quality)
CDS count	59
CDS density	81.59%
tRNA count	5
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	607	Host agreement	99.01
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	2	Host agreement	50

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1504725_3	1408324.JNJK01000014_gene1984	119.0	2.1e-33	N/A	N/A
structural_annotation	UHGV-1504725_3	NF040559,COG0543	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_4	phrog_4608	145.4	4.2039e-43	anti-repressor	transcription regulation
UniRef90	UHGV-1504725_4	UniRef90_R7BIG3	328.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-1504725_4	658655.HMPREF0988_00907	202.0	0	ORF6N domain	N/A
Pfam	UHGV-1504725_4	PF10543	N/A	N/A	ORF6N domain	ORF6N
structural_annotation	UHGV-1504725_4	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1504725_6	UniRef90_A0A0X8KM99	52.4	0.000000102	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1504725_6	1395587.P364_0115835	48.5	0.000000581	N/A	N/A
structural_annotation	UHGV-1504725_6	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1504725_7	877420.ATVW01000018_gene1667	68.9	0.000000000611	N/A	N/A
PHROG	UHGV-1504725_9	phrog_2657	215.5	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1504725_9	UniRef90_R7BHB1	408.0	0	Phage regulatory protein Rha family	N/A
eggNOG-mapper	UHGV-1504725_9	33035.JPJF01000043_gene993	303.0	0	N/A	N/A
Pfam	UHGV-1504725_9	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1504725_9	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1504725_9	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1504725_9	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_10	phrog_1204	261.2	0	tail protein	tail
eggNOG-mapper	UHGV-1504725_10	1298920.KI911353_gene2649	78.6	0.0000000000101	tape measure	N/A
COG	UHGV-1504725_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1504725_11	phrog_1204	151.8	4.2039e-45	tail protein	tail
UniRef90	UHGV-1504725_11	UniRef90_A0A8D9PGP0	482.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-1504725_11	1298920.KI911353_gene2649	181.0	0	tape measure	N/A
COG	UHGV-1504725_11	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1504725_11	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_13	phrog_36112	56.6	2.7e-16	N/A	unknown function
UniRef90	UHGV-1504725_13	UniRef90_A0A8D9PG71	145.0	7.16064e-42	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1504725_13	1298920.KI911353_gene2651	86.3	3.01e-19	N/A	N/A
structural_annotation	UHGV-1504725_13	PF11836	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1504725_14	476272.RUMHYD_01968	188.0	0	N/A	N/A
structural_annotation	UHGV-1504725_14	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1504725_15	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1504725_16	UniRef90_UPI001BBD4500	153.0	2.8026e-44	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1504725_16	397290.C810_01411	207.0	0	N/A	N/A
structural_annotation	UHGV-1504725_16	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1504725_17	1298920.KI911353_gene2656	52.8	0.00000126	N/A	N/A
structural_annotation	UHGV-1504725_17	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_18	phrog_1129	74.7	8e-22	holin	lysis
UniRef90	UHGV-1504725_18	UniRef90_A0A8D9UII9	150.0	1.4013e-45	Holin	N/A
eggNOG-mapper	UHGV-1504725_18	411461.DORFOR_00721	104.0	3.26e-28	N/A	N/A
Pfam	UHGV-1504725_18	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1504725_18	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_19	phrog_1863	55.2	6.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-1504725_19	1232452.BAIB02000007_gene1606	51.2	0.00000106	N/A	N/A
eggNOG-mapper	UHGV-1504725_20	397290.C810_01402	51.2	0.00000142	N/A	N/A
PHROG	UHGV-1504725_21	phrog_390	75.5	5.8e-22	Arc-like repressor	transcription regulation
UniRef90	UHGV-1504725_21	UniRef90_UPI00085C94B8	82.4	2.25e-18	Rho termination factor N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1504725_21	1197953.I6T7M8_9CAUD	73.9	7.9e-16	DNA-dependent transcription, termination	N/A
structural_annotation	UHGV-1504725_21	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_22	phrog_544	186.6	0	major head protein	head and packaging
UniRef90	UHGV-1504725_22	UniRef90_A0A810PZM2	430.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1504725_22	1347392.CCEZ01000005_gene1236	282.0	0	N/A	N/A
structural_annotation	UHGV-1504725_22	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_24	phrog_64	112.5	2.6e-33	portal protein	head and packaging
UniRef90	UHGV-1504725_24	UniRef90_A0A8D9PG58	571.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1504725_24	397290.C810_01397	474.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1504725_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1504725_24	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1504725_25	PF10122,NF041070,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_26	phrog_36	66.6	4.7e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1504725_26	397290.C810_01391	174.0	0	N/A	N/A
structural_annotation	UHGV-1504725_26	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_27	phrog_38	138.5	4.60004e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1504725_27	UniRef90_A0A318EQM2	365.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1504725_27	1123263.AUKY01000015_gene1608	337.0	0	chromosome segregation	N/A
COG	UHGV-1504725_27	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1504725_27	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_28	phrog_478	82.4	5e-24	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1504725_28	UniRef90_R6E548	82.4	2.87e-18	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-1504725_28	1123263.AUKY01000096_gene1821	64.3	0.00000000000569	N/A	N/A
eggNOG-mapper	UHGV-1504725_36	1235793.C809_00537	62.0	0.0000000000102	N/A	N/A
PHROG	UHGV-1504725_39	phrog_229	122.1	4.2e-36	MazG-like pyrophosphatase	other
UniRef90	UHGV-1504725_39	UniRef90_R7BGE2	246.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1504725_39	379066.GAU_2863	115.0	8.87e-32	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1504725_39	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1504725_39	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1504725_39	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
UniRef90	UHGV-1504725_40	UniRef90_C9L7D8	63.5	0.0000000124	T5orf172 domain-containing protein	N/A
Pfam	UHGV-1504725_40	PF10544	N/A	N/A	T5orf172 domain	T5orf172
eggNOG-mapper	UHGV-1504725_41	397290.C810_01353	211.0	0	N/A	N/A
PHROG	UHGV-1504725_43	phrog_31631	141.0	1.3999e-42	N/A	unknown function
eggNOG-mapper	UHGV-1504725_46	469596.HMPREF9488_00919	70.9	0.0000000000000066	N/A	N/A
eggNOG-mapper	UHGV-1504725_50	658655.HMPREF0988_00914	123.0	4.18e-35	N/A	N/A
structural_annotation	UHGV-1504725_50	PF13058	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1504725_51	658655.HMPREF0988_00915	77.4	0.0000000000000285	N/A	N/A
PHROG	UHGV-1504725_52	phrog_20016	224.7	0	N/A	unknown function
UniRef90	UHGV-1504725_52	UniRef90_A0A285PT46	161.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1504725_52	397290.C810_05214	226.0	0	N/A	N/A
structural_annotation	UHGV-1504725_52	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1504725_54	phrog_16490	178.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1504725_54	397290.C810_01328	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-1504725_55	658655.HMPREF0988_00918	79.7	9.42e-19	N/A	N/A
PHROG	UHGV-1504725_56	phrog_21718	53.5	0.0000000000000036	N/A	unknown function
eggNOG-mapper	UHGV-1504725_56	658655.HMPREF0988_00919	112.0	3.52e-29	N/A	N/A
structural_annotation	UHGV-1504725_56	NF033819	N/A	N/A	N/A	N/A
KOfam	UHGV-1504725_58	K14059	253.3	0	int; integrase	N/A
PHROG	UHGV-1504725_58	phrog_1	212.9	0	integrase	integration and excision
UniRef90	UHGV-1504725_58	UniRef90_A0A292SPJ9	584.0	0	Site-specific integrase (Fragment)	N/A
eggNOG-mapper	UHGV-1504725_58	742733.HMPREF9469_03088	373.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1504725_58	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1504725_58	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1504725_58	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1504725_58	PF00589,PF14659,PF02920,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1504725_59	UniRef90_R6V5Z6	60.5	0.0000000000436	DNA binding domain excisionase family	N/A
eggNOG-mapper	UHGV-1504725_59	411470.RUMGNA_03477	60.5	0.00000000000697	Helix-turn-helix domain	N/A
Pfam	UHGV-1504725_59	PF09035	N/A	N/A	Excisionase from transposon Tn916	Tn916-Xis

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1504725	Yes	35,216	40	59	1
UHGV-0392107	No	25,920	40	43	1