vOTU vOTU-032932

vOTU: vOTU-032932

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-032932
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00580 → vOTU-032932
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Massiliomicrobiota → Massiliomicrobiota sp002160865
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0451777
Biosample ID	N/A
Genome length (bp)	23,447 bps
CheckV completeness	60.62% (Medium-quality)
CDS count	37
CDS density	93.20%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Massiliomicrobiota → Massiliomicrobiota sp002160865	Total connections	9	Host agreement	77.78
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 60.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0451777_3	UniRef90_A0A1Y4IQK9	99.4	5.78e-26	N/A	N/A
eggNOG-mapper	UHGV-0451777_3	1229751.R9QLK3_9CAUD	72.4	4.9e-16	N/A	N/A
Pfam	UHGV-0451777_3	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0451777_3	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0451777_4	K01356	149.1	4.62428e-44	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0451777_4	phrog_4	131.9	5.1e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-0451777_4	UniRef90_UPI001CF91FD5	241.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0451777_4	1273103.NM10_06896	189.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0451777_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0451777_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0451777_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0451777_4	PF01381,PF00717,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_5	phrog_888	63.6	2.4e-18	N/A	unknown function
UniRef90	UHGV-0451777_5	UniRef90_A0A1Y3TQU6	306.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-0451777_5	1487921.DP68_09025	70.5	0.00000000000343	N/A	N/A
Pfam	UHGV-0451777_5	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
KOfam	UHGV-0451777_6	K14059	198.8	0	int; integrase	N/A
PHROG	UHGV-0451777_6	phrog_1	202.2	0	integrase	integration and excision
UniRef90	UHGV-0451777_6	UniRef90_A0A6N9L4Z3	502.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0451777_6	1124578.H0UST3_9CAUD	210.0	0	Phage integrase family	N/A
Pfam	UHGV-0451777_6	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0451777_6	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0451777_6	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-0451777_6	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0451777_7	999415.HMPREF9943_00145	55.8	0.00000000762	N/A	N/A
KOfam	UHGV-0451777_12	K01447	97.0	2.4e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0451777_12	phrog_3088	214.4	0	amidase	lysis
UniRef90	UHGV-0451777_12	UniRef90_A0A1Y4R8C5	723.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0451777_12	198094.BA_3767	186.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0451777_12	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0451777_12	COG3103	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_14	phrog_4105	90.3	1.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0451777_14	97139.C824_05951	149.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0451777_15	phrog_1129	79.9	1.9e-23	holin	lysis
UniRef90	UHGV-0451777_15	UniRef90_A0A3E3DX81	140.0	1.27995e-41	Holin	N/A
eggNOG-mapper	UHGV-0451777_15	552396.HMPREF0863_01649	139.0	4.2095e-42	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0451777_15	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0451777_15	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0451777_21	PF09458,NF012201	N/A	N/A	N/A	N/A
UniRef90	UHGV-0451777_23	UniRef90_UPI001CA48B38	94.0	7.25e-18	collagen-like protein	N/A
eggNOG-mapper	UHGV-0451777_23	908340.HMPREF9406_2567	135.0	3.44e-35	N/A	N/A
PHROG	UHGV-0451777_24	phrog_1067	359.8	0	minor head protein	head and packaging
UniRef90	UHGV-0451777_24	UniRef90_UPI000E417F59	676.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0451777_24	1232446.BAIE02000002_gene836	650.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0451777_24	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0451777_24	PF00404	N/A	N/A	Dockerin type I domain	Dockerin_1
NCBIFam	UHGV-0451777_24	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0451777_24	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0451777_24	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_25	phrog_33	70.8	3.3e-20	distal tail protein Dit	tail
UniRef90	UHGV-0451777_25	UniRef90_A0A3E3EI44	276.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0451777_25	1232446.BAIE02000002_gene835	254.0	0	phage tail	N/A
NCBIFam	UHGV-0451777_25	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0451777_25	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0451777_25	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_26	phrog_23464	231.2	0	N/A	unknown function
UniRef90	UHGV-0451777_26	UniRef90_A0A4U7JDN1	102.0	1.2e-18	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0451777_26	33035.JPJF01000023_gene3232	276.0	0	phage tail tape measure protein	N/A
COG	UHGV-0451777_26	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0451777_26	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_28	phrog_709	59.8	4.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0451777_28	386043.lwe1232	53.5	0.00000017	N/A	N/A
structural_annotation	UHGV-0451777_28	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_29	phrog_88	118.6	4.9e-35	major tail protein	tail
UniRef90	UHGV-0451777_29	UniRef90_A0A3E3EG64	286.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0451777_29	476272.RUMHYD_01477	155.0	1.4013e-45	COG NOG11304 non supervised orthologous group	N/A
NCBIFam	UHGV-0451777_29	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0451777_29	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_30	phrog_5	41.5	0.000000000034	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0451777_30	1226322.HMPREF1545_00119	57.8	0.00000000641	N/A	N/A
structural_annotation	UHGV-0451777_30	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0451777_31	1169144.KB910924_gene332	63.5	0.000000000011	N/A	N/A
structural_annotation	UHGV-0451777_31	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_32	phrog_19734	45.4	0.0000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0451777_32	1235792.C808_00088	68.6	0.0000000000005	N/A	N/A
structural_annotation	UHGV-0451777_32	PF16467,MF_01457,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_33	phrog_749	61.1	1.8e-17	N/A	unknown function
PHROG	UHGV-0451777_34	phrog_10	125.2	5.8e-37	major head protein	head and packaging
UniRef90	UHGV-0451777_34	UniRef90_A0A3E3EGM4	484.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0451777_34	349161.Dred_2604	355.0	0	Phage capsid family	N/A
Pfam	UHGV-0451777_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0451777_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0451777_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0451777_34	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0451777_35	K01358	159.0	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0451777_35	phrog_94	226.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0451777_35	UniRef90_A0A3E3EG77	317.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0451777_35	1232452.BAIB02000007_gene1626	200.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0451777_35	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0451777_35	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0451777_35	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_36	phrog_12	149.4	1.96182e-44	portal protein	head and packaging
UniRef90	UHGV-0451777_36	UniRef90_A0A3E3EI59	536.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0451777_36	349161.Dred_2606	323.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0451777_36	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0451777_36	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0451777_36	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0451777_36	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0451777_37	phrog_9	260.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0451777_37	UniRef90_A0A3E3EH16	862.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0451777_37	610130.Closa_0741	617.0	0	Phage Terminase	N/A
Pfam	UHGV-0451777_37	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0451777_37	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0451777_37	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0451777_37	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0451777	Yes	23,447	32	61	1
UHGV-0945630	No	10,438	34	27	1