vOTU vOTU-033123

vOTU: vOTU-033123

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-033123
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → UBA3818 → UBA3818 sp900557155
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-06093 → vGENUS-14689 → vOTU-033123
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → UBA3818 → UBA3818 sp900557155
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0774847
Biosample ID	SAMN07211128
Genome length (bp)	23,370 bps
CheckV completeness	62.72% (Medium-quality)
CDS count	33
CDS density	95.35%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → UBA3818 → UBA3818 sp900557155	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0774847_3	UniRef90_UPI001C1173DA	51.6	0.000000815	helix-turn-helix domain-containing protein	N/A
COG	UHGV-0774847_3	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0774847_3	PF05339,NF041575,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_4	phrog_643	41.6	0.000000000019	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0774847_4	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_7	phrog_8	54.3	0.0000000000000034	transcriptional regulator	transcription regulation
UniRef90	UHGV-0774847_7	UniRef90_UPI001C00E654	78.6	1.03e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0774847_7	1449336.JQLO01000001_gene2237	67.0	0.000000000000212	Transcriptional regulator, Cro CI family	N/A
Pfam	UHGV-0774847_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0774847_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0774847_7	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0774847_8	UniRef90_A0A1C6D4U5	120.0	7.44e-33	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-0774847_8	665950.HMPREF1025_02562	70.1	0.0000000000000835	TRANSCRIPTIONal	N/A
COG	UHGV-0774847_8	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0774847_8	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_9	phrog_87	65.9	5.7e-19	metallo-protease	other
UniRef90	UHGV-0774847_9	UniRef90_UPI001D02ABB3	244.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0774847_9	1007096.BAGW01000011_gene2354	127.0	1.27e-35	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0774847_9	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0774847_9	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0774847_9	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_10	phrog_4980	134.0	1.49939e-42	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0774847_10	UniRef90_UPI00191E8510	79.7	0.000000000000478	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0774847_10	1507.HMPREF0262_00674	84.0	0.00000000000000733	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0774847_10	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
structural_annotation	UHGV-0774847_10	PF18933,PF02631,MF_02248,MF_01114,NF008627,NF001062,COG5435,COG2137	N/A	N/A	N/A	N/A
KOfam	UHGV-0774847_12	K14059	154.7	1.4013e-45	int; integrase	N/A
PHROG	UHGV-0774847_12	phrog_1	156.7	0	integrase	integration and excision
UniRef90	UHGV-0774847_12	UniRef90_UPI0011CB27B7	414.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0774847_12	445971.ANASTE_01587	269.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0774847_12	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0774847_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0774847_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0774847_12	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0774847_13	K07273	237.0	0	acm; lysozyme	N/A
PHROG	UHGV-0774847_13	phrog_291	171.9	0	endolysin	lysis
UniRef90	UHGV-0774847_13	UniRef90_A0A1C5WYX1	237.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0774847_13	537013.CLOSTMETH_02711	214.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0774847_13	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0774847_13	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0774847_13	PF01183,NF002575,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_14	phrog_10091	104.7	6.3e-31	holin	lysis
UniRef90	UHGV-0774847_14	UniRef90_A0A1Y4IXC2	138.0	9.87005e-41	Phage holin	N/A
eggNOG-mapper	UHGV-0774847_14	428127.EUBDOL_01206	130.0	2.15e-38	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0774847_14	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0774847_14	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0774847_14	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0774847_14	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_15	phrog_937	53.6	0.0000000000000041	hemolysin	other
eggNOG-mapper	UHGV-0774847_15	1235792.C808_00576	87.0	6.75e-21	N/A	N/A
PHROG	UHGV-0774847_16	phrog_18593	121.5	4e-36	N/A	unknown function
UniRef90	UHGV-0774847_16	UniRef90_R6RWR8	172.0	0	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0774847_16	411460.RUMTOR_02099	140.0	1.22e-39	N/A	N/A
Pfam	UHGV-0774847_16	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0774847_16	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_18	phrog_16573	54.4	9.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0774847_18	78398.KS43_23435	55.8	0.00000123	PFAM coagulation factor 5 8 type	N/A
Pfam	UHGV-0774847_18	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0774847_19	phrog_1067	354.8	0	minor head protein	head and packaging
UniRef90	UHGV-0774847_19	UniRef90_A0A1C6H6B4	459.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0774847_19	1123263.AUKY01000068_gene489	348.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0774847_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0774847_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0774847_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0774847_19	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_20	phrog_33	49.7	0.000000000000084	distal tail protein Dit	tail
UniRef90	UHGV-0774847_20	UniRef90_A0A1C5W6B6	152.0	2.14959e-42	Phage-related protein	N/A
eggNOG-mapper	UHGV-0774847_20	1123263.AUKY01000068_gene490	107.0	9.34e-26	tail component	N/A
COG	UHGV-0774847_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0774847_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_21	phrog_10613	64.2	2.7e-18	tail length tape measure protein	tail
UniRef90	UHGV-0774847_21	UniRef90_U5FB94	109.0	1.89e-20	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0774847_21	1160721.RBI_II00528	233.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0774847_21	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0774847_21	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_24	phrog_88	94.6	1.1e-27	major tail protein	tail
UniRef90	UHGV-0774847_24	UniRef90_G9YSC5	118.0	6.32e-30	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0774847_24	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0774847_24	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0774847_24	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0774847_25	UniRef90_A0A1C6FG30	138.0	1.05e-38	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0774847_25	908340.HMPREF9406_2573	118.0	1.5e-31	N/A	N/A
structural_annotation	UHGV-0774847_25	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0774847_26	33035.JPJF01000039_gene276	61.6	0.0000000000759	N/A	N/A
structural_annotation	UHGV-0774847_26	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_27	phrog_19734	126.7	1.2e-37	N/A	unknown function
UniRef90	UHGV-0774847_27	UniRef90_A0A6I7GNS7	154.0	0	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0774847_27	349161.Dred_2602	86.3	4.02e-20	N/A	N/A
structural_annotation	UHGV-0774847_27	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_28	phrog_749	55.7	8.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0774847_28	1211817.CCAT010000053_gene2133	59.7	0.000000000368	N/A	N/A
PHROG	UHGV-0774847_29	phrog_10	126.6	2.9e-37	major head protein	head and packaging
UniRef90	UHGV-0774847_29	UniRef90_A0A328U7P3	611.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0774847_29	1235792.C808_00086	472.0	0	Phage capsid family	N/A
Pfam	UHGV-0774847_29	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0774847_29	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0774847_29	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0774847_29	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0774847_29	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0774847_30	K01358	107.7	1.5e-31	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0774847_30	phrog_94	167.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0774847_30	UniRef90_UPI00156EEE56	171.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0774847_30	1232452.BAIB02000007_gene1626	159.0	1.4013e-45	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0774847_30	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0774847_30	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0774847_30	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_31	phrog_12	131.9	3.9e-39	portal protein	head and packaging
UniRef90	UHGV-0774847_31	UniRef90_UPI0018755FA4	455.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0774847_31	349161.Dred_2606	288.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0774847_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0774847_31	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0774847_31	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0774847_31	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_32	phrog_9	248.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0774847_32	UniRef90_A0A1C6FFC9	884.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0774847_32	610130.Closa_0741	632.0	0	Phage Terminase	N/A
Pfam	UHGV-0774847_32	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0774847_32	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0774847_32	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0774847_33	phrog_5110	81.0	9.9e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0774847_33	UniRef90_UPI001D57FD6D	84.0	1.94e-18	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0774847_33	202752.JL53_00755	50.8	0.00000196	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0774847_33	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0774847	Yes	23,370	46	63	1
UHGV-1326483	No	17,650	48	47	1