vOTU vOTU-033367

vOTU: vOTU-033367

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-033367
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vOTU-033367
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → QALW01
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0093619
Biosample ID	SAMEA3449341
Genome length (bp)	28,479 bps
CheckV completeness	68.62% (Medium-quality)
CDS count	37
CDS density	96.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → QALW01	Total connections	13	Host agreement	92.31
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → QALW01 → QALW01 → QALW01 sp900552055	Total connections	8	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0093619_1	UniRef90_A0A316QDA6	127.0	2.74e-36	Enolase	N/A
eggNOG-mapper	UHGV-0093619_1	411473.RUMCAL_01944	60.5	0.0000000000456	Phage holin family Hol44, in holin superfamily V	N/A
structural_annotation	UHGV-0093619_1	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0093619_2	PF07328,NF001949	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_4	phrog_19111	47.2	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0093619_4	411471.SUBVAR_06929	320.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0093619_4	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0093619_5	phrog_25979	41.2	0.000000000013	N/A	unknown function
COG	UHGV-0093619_5	COG1409	N/A	N/A	3',5'-cyclic AMP phosphodiesterase CpdA	N/A
PHROG	UHGV-0093619_6	phrog_14770	123.8	1.7e-37	N/A	unknown function
UniRef90	UHGV-0093619_6	UniRef90_A0A4R2L561	352.0	0	SNF2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0093619_6	1121091.AUMP01000003_gene2597	322.0	0	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-0093619_6	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0093619_6	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0093619_6	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-0093619_7	1203606.HMPREF1526_02741	59.7	0.000000709	N/A	N/A
PHROG	UHGV-0093619_9	phrog_511	86.0	3.9e-25	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0093619_9	748224.HMPREF9436_01402	65.9	0.0000000166	N/A	N/A
PHROG	UHGV-0093619_10	phrog_12105	40.6	0.0000000000067	N/A	unknown function
PHROG	UHGV-0093619_11	phrog_15239	55.1	0.0000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0093619_11	1507.HMPREF0262_03462	50.1	0.000000378	N/A	N/A
PHROG	UHGV-0093619_12	phrog_1357	230.5	0	major head protein	head and packaging
UniRef90	UHGV-0093619_12	UniRef90_UPI001CF832E1	346.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0093619_12	1449126.JQKL01000003_gene1695	337.0	0	N/A	N/A
Pfam	UHGV-0093619_12	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0093619_12	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0093619_12	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_13	phrog_13908	119.4	3.2e-35	N/A	unknown function
eggNOG-mapper	UHGV-0093619_13	1410650.JHWL01000003_gene2831	60.1	0.000000156	N/A	N/A
KOfam	UHGV-0093619_14	K07584	49.2	0.00000000000011	N/A	N/A
PHROG	UHGV-0093619_14	phrog_4478	63.3	3.2e-18	peptidase	other
Pfam	UHGV-0093619_14	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0093619_14	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0093619_14	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_15	phrog_156	238.7	0	portal protein	head and packaging
UniRef90	UHGV-0093619_15	UniRef90_A0A2K9P4K6	382.0	0	Sigma-70 region 2	N/A
eggNOG-mapper	UHGV-0093619_15	1507.HMPREF0262_03465	395.0	0	N/A	N/A
structural_annotation	UHGV-0093619_15	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0093619_16	K06909	127.5	1.5e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0093619_16	phrog_979	150.9	1.4013e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0093619_16	UniRef90_A0A7U9NMD5	540.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0093619_16	1507.HMPREF0262_03468	540.0	0	N/A	N/A
Pfam	UHGV-0093619_16	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0093619_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0093619_16	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_17	phrog_2412	65.6	8.5e-19	N/A	unknown function
UniRef90	UHGV-0093619_17	UniRef90_UPI0011CC13F5	71.2	0.000000000000272	stress-induced protein	N/A
eggNOG-mapper	UHGV-0093619_17	1122981.AUME01000026_gene531	67.0	0.00000000000175	N/A	N/A
PHROG	UHGV-0093619_18	phrog_36	59.1	9.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0093619_18	UniRef90_A0A3D3FGT2	75.9	0.00000000000000799	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0093619_18	1410624.JNKK01000051_gene2469	72.0	0.0000000000000328	sigma factor activity	N/A
COG	UHGV-0093619_18	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0093619_18	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_19	phrog_757	101.3	8.3e-30	DNA methyltransferase	other
UniRef90	UHGV-0093619_19	UniRef90_A0A7C6JZZ1	234.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0093619_19	457398.HMPREF0326_03026	104.0	5e-25	C-5 cytosine-specific DNA methylase	N/A
structural_annotation	UHGV-0093619_19	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0093619_21	K01160	63.2	7.2e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0093619_21	phrog_140	127.7	6.8e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0093619_21	UniRef90_UPI00041C45A3	124.0	1.47e-33	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0093619_21	1123263.AUKY01000072_gene2102	124.0	2.46e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0093619_21	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0093619_21	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0093619_21	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_22	phrog_270	111.5	1e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0093619_22	1519439.JPJG01000051_gene720	116.0	4.37e-28	HNH endonuclease	N/A
COG	UHGV-0093619_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0093619_22	PF07106,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_23	phrog_2113	52.3	0.0000000000000066	N/A	unknown function
UniRef90	UHGV-0093619_23	UniRef90_UPI000835921F	57.8	0.0000000149	helix-turn-helix domain-containing protein	N/A
KOfam	UHGV-0093619_24	K03111	149.2	4.2039e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0093619_24	phrog_44	143.6	1.19951e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0093619_24	UniRef90_A0A316Q8B3	184.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0093619_24	941824.TCEL_02056	129.0	1.16e-36	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0093619_24	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0093619_24	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0093619_24	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0093619_24	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0093619_24	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_25	phrog_72	48.6	0.00000000000014	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0093619_25	1304866.K413DRAFT_1197	92.0	5.44e-21	N/A	N/A
structural_annotation	UHGV-0093619_25	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_26	phrog_659	211.5	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0093619_26	UniRef90_UPI001E5A6693	234.0	0	N/A	N/A
eggNOG-mapper	UHGV-0093619_26	1507.HMPREF0262_00431	220.0	0	N/A	N/A
Pfam	UHGV-0093619_26	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0093619_26	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_28	phrog_1029	227.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0093619_28	1567010.A0A0A7S0W4_9VIRU	179.0	0	N/A	N/A
structural_annotation	UHGV-0093619_28	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0093619_29	phrog_997	105.0	6.3e-31	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0093619_29	UniRef90_A0A5B0W234	87.8	7.67e-20	Replication terminator protein	N/A
eggNOG-mapper	UHGV-0093619_29	756499.Desde_1051	98.2	8.6e-25	N/A	N/A
KOfam	UHGV-0093619_31	K21919	68.2	1.1e-19	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0093619_31	phrog_923	74.5	7.9e-22	N/A	unknown function
Pfam	UHGV-0093619_31	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
KOfam	UHGV-0093619_35	K07727	80.3	3.9e-23	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0093619_35	phrog_38620	41.5	0.000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-0093619_35	UniRef90_UPI00118473B2	100.0	1.52e-26	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0093619_35	764562.D7RWM4_9CAUD	87.8	4.96e-22	sequence-specific DNA binding	N/A
Pfam	UHGV-0093619_35	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0093619_35	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0093619_36	K07727	92.4	7.4e-27	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0093619_36	phrog_38620	60.3	3.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0093619_36	UniRef90_UPI000696B62B	102.0	2.52e-24	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0093619_36	1159488.SEQMU2_13765	79.0	0.0000000000000011	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0093619_36	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0093619_36	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0093619_36	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0093619_37	K22299	42.2	0.000000000017	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0093619_37	phrog_3	47.9	0.00000000000053	transcriptional repressor	transcription regulation
UniRef90	UHGV-0093619_37	UniRef90_A0A316QIY5	98.2	2.53e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0093619_37	665956.HMPREF1032_03112	73.2	2.53e-16	sequence-specific DNA binding	N/A
Pfam	UHGV-0093619_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0093619_37	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0093619_37	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0093619	Yes	28,479	46	69	1
UHGV-1147827	No	13,749	46	33	1