vOTU vOTU-033415

vOTU: vOTU-033415

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-033415
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00232 → vOTU-033415
Host lineage
Host range breadth
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-1303826
Biosample ID	N/A
Genome length (bp)	27,471 bps
CheckV completeness	70.04% (Medium-quality)
CDS count	48
CDS density	92.90%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1303826_1	469617.FUAG_00837	53.1	0.000000091	Phage capsid family	N/A
COG	UHGV-1303826_1	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
PHROG	UHGV-1303826_2	phrog_40	60.4	2.5e-17	head-tail adaptor Ad1	connector
UniRef90	UHGV-1303826_2	UniRef90_UPI001897779E	103.0	2.94e-27	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1303826_2	195103.CPF_1583	74.7	1.78e-16	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1303826_2	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1303826_2	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1303826_2	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_3	phrog_25	84.6	1e-24	head closure Hc1	connector
UniRef90	UHGV-1303826_3	UniRef90_A0A1M4ZEC7	105.0	2.26e-27	Phage head-tail adaptor, putative, SPP1 family	N/A
eggNOG-mapper	UHGV-1303826_3	155515.JP36_07460	98.2	3e-25	Phage head-tail joining protein	N/A
Pfam	UHGV-1303826_3	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1303826_3	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1303826_3	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1303826_3	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_4	phrog_5	60.1	6.1e-17	tail completion or Neck1 protein	connector
UniRef90	UHGV-1303826_4	UniRef90_A0A1M4ZE79	118.0	3.21e-31	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1303826_4	324057.Pjdr2_1547	105.0	5.8e-27	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1303826_4	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1303826_4	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1303826_4	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_5	phrog_347	46.4	0.00000000000053	tail terminator	connector
UniRef90	UHGV-1303826_5	UniRef90_UPI001C59BF42	80.1	7.12e-17	N/A	N/A
eggNOG-mapper	UHGV-1303826_5	1536773.R70331_25695	82.8	1.06e-18	N/A	N/A
structural_annotation	UHGV-1303826_5	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_6	phrog_158	59.7	6.5e-17	major tail protein	tail
UniRef90	UHGV-1303826_6	UniRef90_A0A1C6JNH2	160.0	0	Predicted secreted protein	N/A
eggNOG-mapper	UHGV-1303826_6	1414720.CBYM010000002_gene566	160.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1303826_6	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-1303826_6	PF16461,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_7	phrog_2115	51.3	0.000000000000027	tail protein	tail
UniRef90	UHGV-1303826_7	UniRef90_A0A533S6D3	63.5	0.0000000000416	Gene transfer agent family protein	N/A
eggNOG-mapper	UHGV-1303826_7	1414720.CBYM010000002_gene564	121.0	1.2e-34	N/A	N/A
structural_annotation	UHGV-1303826_7	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_8	phrog_19318	57.0	3.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1303826_8	1122919.KB905559_gene1348	52.4	0.000000171	N/A	N/A
PHROG	UHGV-1303826_9	phrog_1535	301.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1303826_9	UniRef90_A0A1C6JZ05	449.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1303826_9	1235800.C819_00476	514.0	0	tape measure	N/A
COG	UHGV-1303826_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1303826_9	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_11	phrog_1194	106.2	2e-31	N/A	unknown function
eggNOG-mapper	UHGV-1303826_11	645991.Sgly_0353	84.0	1.97e-19	N/A	N/A
Pfam	UHGV-1303826_11	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1303826_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_13	phrog_6616	44.3	0.0000000000013	tail protein	tail
eggNOG-mapper	UHGV-1303826_13	1158614.I592_02258	81.6	0.000000000000161	Prophage endopeptidase tail	N/A
COG	UHGV-1303826_13	COG4926	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-1303826_16	UniRef90_UPI0006B5D213	102.0	1.37e-18	BppU family phage baseplate upper protein	N/A
Pfam	UHGV-1303826_18	PF20787	N/A	N/A	SPP1 phage GP23.1	SPP1_GP23-1
PHROG	UHGV-1303826_19	phrog_1863	47.4	0.00000000000016	N/A	unknown function
eggNOG-mapper	UHGV-1303826_19	1033740.CAEW01000026_gene549	49.3	0.00000224	N/A	N/A
eggNOG-mapper	UHGV-1303826_21	642492.Clole_0840	139.0	2.2701e-42	N/A	N/A
KOfam	UHGV-1303826_22	K01447	124.0	1.8e-36	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1303826_22	phrog_9611	141.9	4.1002e-42	endolysin	lysis
UniRef90	UHGV-1303826_22	UniRef90_F2JQ26	372.0	0	N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD	N/A
eggNOG-mapper	UHGV-1303826_22	642492.Clole_0841	372.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1303826_22	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1303826_22	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
PHROG	UHGV-1303826_23	phrog_8487	43.6	0.0000000000039	N/A	unknown function
eggNOG-mapper	UHGV-1303826_23	1034347.CAHJ01000080_gene1213	56.2	0.0000000358	Streptococcus thermophilus bacteriophage Gp111 protein	N/A
Pfam	UHGV-1303826_23	PF07410	N/A	N/A	Streptococcus thermophilus bacteriophage Gp111 protein	Phage_Gp111
PHROG	UHGV-1303826_25	phrog_27252	52.2	0.000000000000013	N/A	unknown function
UniRef90	UHGV-1303826_25	UniRef90_A0A1U7M7K4	64.7	0.00000000000179	HTH_59 domain-containing protein	N/A
eggNOG-mapper	UHGV-1303826_25	1151292.QEW_4392	60.5	0.0000000000142	N/A	N/A
Pfam	UHGV-1303826_25	PF20038	N/A	N/A	Helix-turn-helix domain	HTH_59
PHROG	UHGV-1303826_26	phrog_13470	59.4	1.6e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1303826_26	UniRef90_A0A1Y4B6X9	152.0	2.23003e-41	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-1303826_26	903814.ELI_3180	110.0	2.77e-27	N/A	N/A
structural_annotation	UHGV-1303826_26	PF18337,PF00847	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_28	phrog_12151	79.2	5.6e-23	N/A	unknown function
KOfam	UHGV-1303826_29	K14059	245.4	0	int; integrase	N/A
PHROG	UHGV-1303826_29	phrog_1	220.4	0	integrase	integration and excision
UniRef90	UHGV-1303826_29	UniRef90_F2JNV0	568.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-1303826_29	642492.Clole_0715	568.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1303826_29	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1303826_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1303826_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1303826_29	PF00589,PF14659,PF12286,MF_01807,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_30	phrog_87	84.5	9.6e-25	metallo-protease	other
UniRef90	UHGV-1303826_30	UniRef90_A0A420VI29	141.0	4.3e-40	Putative Zn peptidase	N/A
eggNOG-mapper	UHGV-1303826_30	1089548.KI783301_gene2642	138.0	8.29e-40	Zn peptidase	N/A
Pfam	UHGV-1303826_30	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1303826_30	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1303826_30	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1303826_31	K22300	42.9	0.0000000000096	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1303826_31	phrog_8	70.8	2.5e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1303826_31	UniRef90_F2JQR5	94.0	7.2e-22	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1303826_31	642492.Clole_0928	94.0	1.21e-22	addiction module antidote protein HigA	N/A
COG	UHGV-1303826_31	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
KOfam	UHGV-1303826_32	K07741	149.0	7.14662e-44	antB; anti-repressor protein	N/A
PHROG	UHGV-1303826_32	phrog_130	268.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1303826_32	UniRef90_A0A5C0SEH3	342.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1303826_32	573061.Clocel_3580	309.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1303826_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1303826_32	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1303826_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1303826_32	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_33	phrog_1468	63.1	2.3e-18	transcriptional repressor	transcription regulation
UniRef90	UHGV-1303826_33	UniRef90_F2JQR6	79.0	5.94e-18	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1303826_33	642492.Clole_0929	79.0	9.96e-19	Helix-turn-helix	N/A
structural_annotation	UHGV-1303826_33	PF01381,NF010465,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1303826_34	UniRef90_F2JNV5	100.0	2.32e-25	HTH_17 domain-containing protein	N/A
Pfam	UHGV-1303826_34	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
COG	UHGV-1303826_34	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
eggNOG-mapper	UHGV-1303826_35	697281.Mahau_2928	61.2	0.0000000000151	N/A	N/A
PHROG	UHGV-1303826_42	phrog_3490	142.7	1.90016e-42	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1303826_42	UniRef90_F2JQT0	325.0	0	ERCC4 domain protein	N/A
eggNOG-mapper	UHGV-1303826_42	642492.Clole_0943	325.0	0	ERCC4 domain	N/A
Pfam	UHGV-1303826_42	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1303826_42	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_43	phrog_155	118.7	5.4e-35	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1303826_43	UniRef90_A0A3B8SWQ8	233.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1303826_43	1304866.K413DRAFT_1196	199.0	0	ERF superfamily	N/A
Pfam	UHGV-1303826_43	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-1303826_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1303826_43	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1303826_44	K03111	98.6	1.1e-28	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1303826_44	phrog_44	111.7	7.6e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1303826_44	UniRef90_F2JQT2	214.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1303826_44	642492.Clole_0945	214.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1303826_44	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1303826_44	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1303826_44	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1303826_44	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1303826_44	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_45	phrog_2514	115.1	6.7e-34	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1303826_45	UniRef90_F2JQT3	253.0	0	Phage regulatory protein	N/A
eggNOG-mapper	UHGV-1303826_45	642492.Clole_0946	253.0	0	DnaD domain protein	N/A
COG	UHGV-1303826_45	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1303826_45	PF09681,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-1303826_46	K17680	139.5	2.09999e-41	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-1303826_46	phrog_239	133.9	1.3e-39	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1303826_46	UniRef90_F2JQT4	894.0	0	DnaB domain protein helicase domain protein	N/A
eggNOG-mapper	UHGV-1303826_46	642492.Clole_0947	894.0	0	N/A	N/A
Pfam	UHGV-1303826_46	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1303826_46	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1303826_46	PF03796,PF19898,MF_04154,NF006458,TIGR01391,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1303826_48	phrog_236	100.7	2.7e-29	nucleotide kinase	other
UniRef90	UHGV-1303826_48	UniRef90_A0A5B9YJ16	128.0	3.74e-37	N/A	N/A
eggNOG-mapper	UHGV-1303826_48	1111454.HMPREF1250_1038	105.0	2.93e-29	N/A	N/A
Pfam	UHGV-1303826_48	PF11753	N/A	N/A	N/A	DUF3310

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1303826	Yes	27,471	34	70	1
UHGV-1280920	No	16,864	34	43	1