vOTU vOTU-033422

vOTU: vOTU-033422

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-033422
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-04157 → vGENUS-20435 → vOTU-033422
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1071
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1297734
Biosample ID	SAMN02044689
Genome length (bp)	31,920 bps
CheckV completeness	84.40% (Medium-quality)
CDS count	42
CDS density	92.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1071	Total connections	60	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UMGS1071 → UMGS1071 sp900542375	Total connections	8	Host agreement	87.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 84.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1297734_1	phrog_9	343.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1297734_1	UniRef90_UPI000773ED19	721.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1297734_1	536232.CLM_1656	701.0	0	Terminase	N/A
Pfam	UHGV-1297734_1	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1297734_1	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1297734_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1297734_1	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_2	phrog_12	240.5	0	portal protein	head and packaging
UniRef90	UHGV-1297734_2	UniRef90_A0A3F2ZQR1	553.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1297734_2	536232.CLM_1657	552.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1297734_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1297734_2	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1297734_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1297734_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1297734_3	K01358	121.8	7.9e-36	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1297734_3	phrog_94	219.3	0	head maturation protease	head and packaging
UniRef90	UHGV-1297734_3	UniRef90_R6FVQ7	286.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1297734_3	1567013.A0A0A7RTN2_9CAUD	260.0	0	Clp protease	N/A
Pfam	UHGV-1297734_3	PF00574	N/A	N/A	Clp protease	CLP_protease
structural_annotation	UHGV-1297734_3	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_4	phrog_10	154.1	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-1297734_4	UniRef90_UPI000C76C68B	511.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1297734_4	536232.CLM_1659	489.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1297734_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1297734_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1297734_4	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1297734_4	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_5	phrog_40	57.9	1.5e-16	head-tail adaptor Ad1	connector
UniRef90	UHGV-1297734_5	UniRef90_UPI000773A5A6	114.0	1.55e-31	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1297734_5	536232.CLM_1660	110.0	7.31e-31	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1297734_5	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1297734_5	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1297734_5	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_6	phrog_25	81.7	7.9e-24	head closure Hc1	connector
UniRef90	UHGV-1297734_6	UniRef90_UPI0011856DD4	115.0	6.2e-31	phage head closure protein	N/A
eggNOG-mapper	UHGV-1297734_6	742740.HMPREF9474_01210	114.0	1.35e-31	Phage head-tail joining protein	N/A
Pfam	UHGV-1297734_6	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1297734_6	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1297734_6	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1297734_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_7	phrog_5	64.2	9.2e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-1297734_7	UniRef90_R5S8G2	132.0	1.02e-36	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1297734_7	1235793.C809_01923	77.8	3.71e-16	N/A	N/A
Pfam	UHGV-1297734_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1297734_7	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1297734_7	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_8	phrog_78	57.9	2e-16	tail terminator	connector
UniRef90	UHGV-1297734_8	UniRef90_UPI001C54EC97	66.2	0.00000000000996	N/A	N/A
eggNOG-mapper	UHGV-1297734_8	1195236.CTER_5107	130.0	1.01e-37	N/A	N/A
structural_annotation	UHGV-1297734_8	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_9	phrog_88	96.0	4.1e-28	major tail protein	tail
UniRef90	UHGV-1297734_9	UniRef90_A0A174CNN5	155.0	1.4013e-44	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1297734_9	1235793.C809_01925	148.0	1.71939e-42	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1297734_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1297734_9	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1297734_9	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_10	phrog_2115	55.4	0.0000000000000014	tail protein	tail
eggNOG-mapper	UHGV-1297734_10	994573.T472_0210995	53.1	0.000000231	N/A	N/A
structural_annotation	UHGV-1297734_10	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_11	phrog_4980	103.1	0	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1297734_11	UniRef90_A0A4P8IBH7	73.6	0.0000000000528	Putative superinfection immunity protein	N/A
eggNOG-mapper	UHGV-1297734_11	658086.HMPREF0994_06731	92.8	2.6e-18	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-1297734_11	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-1297734_11	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1297734_11	PF18933,PF02631,MF_02248,MF_01114,NF008627,NF001062,COG5435,COG2137	N/A	N/A	N/A	N/A
KOfam	UHGV-1297734_12	K20283	53.6	6.5e-16	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-1297734_12	phrog_1272	295.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1297734_12	UniRef90_UPI001EDCC813	438.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1297734_12	908340.HMPREF9406_2570	249.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-1297734_12	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1297734_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1297734_12	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_13	phrog_33	84.1	2.8e-24	distal tail protein Dit	tail
UniRef90	UHGV-1297734_13	UniRef90_A0A358PXF7	189.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1297734_13	272562.CA_C0062	166.0	0	tail component	N/A
COG	UHGV-1297734_13	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1297734_13	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_14	phrog_1067	420.1	0	minor head protein	head and packaging
UniRef90	UHGV-1297734_14	UniRef90_A0A4U9RA14	348.0	0	Phage endopeptidase	N/A
eggNOG-mapper	UHGV-1297734_14	1408823.AXUS01000025_gene2634	299.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1297734_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1297734_14	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1297734_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1297734_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1297734_14	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_15	phrog_24267	60.6	3.5e-17	N/A	unknown function
UniRef90	UHGV-1297734_15	UniRef90_A0A412AXT4	120.0	4.65e-27	N/A	N/A
eggNOG-mapper	UHGV-1297734_15	33035.JPJF01000023_gene3223	107.0	4.06e-24	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-1297734_15	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-1297734_15	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1297734_15	PF10651,NF040788,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-1297734_17	K01447	54.6	0.0000000000000023	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1297734_17	phrog_7698	187.0	0	endolysin	lysis
UniRef90	UHGV-1297734_17	UniRef90_A0A1C5RHE6	319.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1297734_17	293826.Amet_2548	210.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1297734_17	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1297734_17	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1297734_17	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_18	phrog_4105	44.3	0.0000000000027	N/A	unknown function
PHROG	UHGV-1297734_19	phrog_1129	92.3	2.5e-27	holin	lysis
UniRef90	UHGV-1297734_19	UniRef90_UPI001D085C49	100.0	1.78e-25	phage holin family protein	N/A
eggNOG-mapper	UHGV-1297734_19	411460.RUMTOR_01325	93.6	1.62e-23	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1297734_19	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1297734_19	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_20	phrog_5978	152.0	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1297734_20	UniRef90_A0A410PSE3	337.0	0	Fic family protein	N/A
eggNOG-mapper	UHGV-1297734_20	1120998.AUFC01000015_gene1631	335.0	0	Fic/DOC family	N/A
Pfam	UHGV-1297734_20	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-1297734_20	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-1297734_20	PF07183,MF_01911,NF040876,COG3177	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1297734_21	1235802.C823_02864	65.1	0.000000000000275	N/A	N/A
eggNOG-mapper	UHGV-1297734_22	1235800.C819_03386	56.6	0.000000000456	N/A	N/A
structural_annotation	UHGV-1297734_22	PF03869,NF008671,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1297734_26	K14059	143.2	3.00018e-42	int; integrase	N/A
PHROG	UHGV-1297734_26	phrog_1	147.6	1.09301e-43	integrase	integration and excision
UniRef90	UHGV-1297734_26	UniRef90_R6ZYN0	300.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-1297734_26	1095750.HMPREF9970_1688	276.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1297734_26	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1297734_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1297734_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1297734_26	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_27	phrog_806	52.1	0.000000000000012	N/A	unknown function
UniRef90	UHGV-1297734_27	UniRef90_A0A1Y4S102	62.4	0.000000009	N/A	N/A
Pfam	UHGV-1297734_27	PF16729	N/A	N/A	N/A	DUF5067
KOfam	UHGV-1297734_28	K01356	147.3	1.49939e-43	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1297734_28	phrog_4	112.0	7.4e-33	transcriptional repressor	transcription regulation
UniRef90	UHGV-1297734_28	UniRef90_A0A1Y4J566	221.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1297734_28	1118057.CAGX01000020_gene1659	176.0	0	Represses a number of genes involved in the response to DNA damage (SOS response)	N/A
PADLOC	UHGV-1297734_28	retron_type_VI_hth_cluster2_1	48.0	0.00000000000025	N/A	Retron
Pfam	UHGV-1297734_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1297734_28	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1297734_28	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1297734_28	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1297734_29	UniRef90_A0A7D3YC36	79.0	5.34e-18	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1297734_29	279010.BL00668	77.8	3.42e-18	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1297734_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1297734_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1297734_29	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1297734_31	PF13601,NF008565,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_33	phrog_750	136.8	5.79997e-41	N/A	unknown function
eggNOG-mapper	UHGV-1297734_33	1158610.UC3_02381	92.8	7e-23	N/A	N/A
structural_annotation	UHGV-1297734_33	PF03444,COG5045	N/A	N/A	N/A	N/A
Pfam	UHGV-1297734_34	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1297734_34	PF20432,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1297734_36	526218.Sterm_0798	70.5	0.0000000000000546	N/A	N/A
PHROG	UHGV-1297734_38	phrog_2872	251.8	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1297734_38	UniRef90_A0A316RHU5	300.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1297734_38	754027.HMPREF9554_00709	226.0	0	N/A	N/A
Pfam	UHGV-1297734_38	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1297734_38	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_39	phrog_18107	94.3	1.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1297734_39	476272.RUMHYD_02831	160.0	0	N/A	N/A
structural_annotation	UHGV-1297734_39	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_40	phrog_3490	143.0	1.49939e-42	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1297734_40	UniRef90_A0A0M2NJW5	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-1297734_40	476272.RUMHYD_01740	178.0	0	ERCC4 domain	N/A
Pfam	UHGV-1297734_40	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-1297734_40	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-1297734_40	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1297734_41	K02316	76.5	4.2e-22	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1297734_41	phrog_11992	123.5	1.8e-36	N/A	unknown function
UniRef90	UHGV-1297734_41	UniRef90_A0A2U1BEF8	107.0	2.6e-26	CHC2-type zinc finger protein	N/A
eggNOG-mapper	UHGV-1297734_41	1514668.JOOA01000002_gene2050	93.6	3.12e-21	CHC2 zinc finger domain protein	N/A
PADLOC	UHGV-1297734_41	drt-UG29	65.3	6.4e-19	DRT	DRT
Pfam	UHGV-1297734_41	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1297734_41	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1297734_41	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1297734_42	phrog_8841	522.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1297734_42	UniRef90_A0A1C6FPW9	780.0	0	Superfamily II helicase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-1297734_42	1007096.BAGW01000023_gene149	545.0	0	N/A	N/A
Pfam	UHGV-1297734_42	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1297734_42	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1297734_42	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1297734_42	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1297734	Yes	31,920	36	84	1
UHGV-1285323	No	11,951	35	31	1