vOTU vOTU-034076

vOTU: vOTU-034076

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034076
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-07004 → vOTU-034076
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G → Eubacterium_G sp000432355
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1385666
Biosample ID	SAMEA3449205
Genome length (bp)	30,218 bps
CheckV completeness	72.16% (Medium-quality)
CDS count	50
CDS density	94.66%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G → Eubacterium_G sp000432355	Total connections	46	Host agreement	84.78
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.16)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1385666_1	411470.RUMGNA_02189	69.3	0.0000000000000506	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
COG	UHGV-1385666_1	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
KOfam	UHGV-1385666_3	K10906	89.3	3.1e-35	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-1385666_3	phrog_412	249.5	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385666_3	UniRef90_A0A1C6GFL6	278.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-1385666_3	395494.Galf_0946	175.0	0	N/A	N/A
Pfam	UHGV-1385666_3	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-1385666_3	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_4	phrog_1499	286.0	0	N/A	unknown function
UniRef90	UHGV-1385666_4	UniRef90_D3AA93	561.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1385666_4	742733.HMPREF9469_01850	559.0	0	DNA recombination	N/A
COG	UHGV-1385666_4	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1385666_4	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_5	phrog_3657	335.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1385666_5	1121864.OMO_02139	213.0	0	N/A	N/A
KOfam	UHGV-1385666_6	K03111	121.6	9.9e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1385666_6	phrog_44	134.0	1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385666_6	UniRef90_A0A255IMH7	164.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1385666_6	411463.EUBVEN_00539	158.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1385666_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1385666_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1385666_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1385666_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1385666_6	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_7	phrog_3490	104.0	1.4e-30	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385666_7	UniRef90_A0A2K3JBB6	155.0	1.4013e-45	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1385666_7	411460.RUMTOR_02068	99.8	1.66e-24	N/A	N/A
Pfam	UHGV-1385666_7	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1385666_7	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1385666_8	K02316	64.6	1.5e-18	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1385666_8	phrog_11992	156.5	0	N/A	unknown function
UniRef90	UHGV-1385666_8	UniRef90_UPI001D0EB8AA	165.0	0	CHC2 zinc finger domain-containing protein	N/A
eggNOG-mapper	UHGV-1385666_8	476272.RUMHYD_01741	149.0	2.20004e-43	CHC2 zinc finger	N/A
PADLOC	UHGV-1385666_8	drt-UG29	66.3	3.2e-19	DRT	DRT
Pfam	UHGV-1385666_8	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1385666_8	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1385666_8	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_9	phrog_8841	420.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385666_9	UniRef90_UPI00143B22DC	456.0	0	N/A	N/A
eggNOG-mapper	UHGV-1385666_9	357809.Cphy_2984	405.0	0	N/A	N/A
Pfam	UHGV-1385666_9	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1385666_9	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1385666_9	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1385666_9	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_13	phrog_2044	97.0	9.8e-29	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1385666_13	1235799.C818_02661	114.0	2e-32	N/A	N/A
structural_annotation	UHGV-1385666_13	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_14	phrog_1891	234.0	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385666_14	UniRef90_K1T1G4	279.0	0	Phage protein (Fragment)	N/A
eggNOG-mapper	UHGV-1385666_14	552396.HMPREF0863_00287	169.0	0	HNH endonuclease	N/A
Pfam	UHGV-1385666_14	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1385666_14	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_15	phrog_21026	54.4	0.0000000000000025	N/A	unknown function
PHROG	UHGV-1385666_19	phrog_20593	44.4	0.000000000000064	N/A	unknown function
PHROG	UHGV-1385666_20	phrog_954	247.7	0	DNA methyltransferase	other
UniRef90	UHGV-1385666_20	UniRef90_A0A413RZZ9	320.0	0	Class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-1385666_20	457405.FSDG_01549	244.0	0	methyltransferase	N/A
PADLOC	UHGV-1385666_20	MTase_II_00074	231.2	0	Type II methyltransferase	RM
Pfam	UHGV-1385666_20	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1385666_20	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-1385666_20	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1385666_22	1042156.CXIVA_01870	89.0	6.55e-23	N/A	N/A
structural_annotation	UHGV-1385666_22	NF008671,COG4710	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1385666_23	537013.CLOSTMETH_01096	57.0	0.00000000336	N/A	N/A
KOfam	UHGV-1385666_24	K07451	42.8	0.0000000000087	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1385666_24	phrog_119	75.4	7e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385666_24	UniRef90_A0A415MTD9	125.0	9.38e-35	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1385666_24	610130.Closa_0739	87.8	8.09e-21	HNH nucleases	N/A
Pfam	UHGV-1385666_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1385666_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1385666_26	phrog_9	262.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1385666_26	UniRef90_UPI00164CCF79	674.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1385666_26	1235798.C817_02581	452.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1385666_26	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1385666_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1385666_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1385666_26	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_27	phrog_12	125.4	3.7e-37	portal protein	head and packaging
UniRef90	UHGV-1385666_27	UniRef90_UPI00148519DF	290.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1385666_27	1121866.AUGK01000006_gene878	180.0	0	Phage portal protein	N/A
Pfam	UHGV-1385666_27	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1385666_27	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1385666_27	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1385666_27	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1385666_28	K01358	136.4	2.69999e-40	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1385666_28	phrog_94	216.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1385666_28	UniRef90_A0A7C6S6U4	253.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1385666_28	1232452.BAIB02000007_gene1626	200.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1385666_28	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1385666_28	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1385666_28	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_29	phrog_10	98.6	6.7e-29	major head protein	head and packaging
UniRef90	UHGV-1385666_29	UniRef90_A0A316SAG0	399.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1385666_29	1384484.AEQU_1180	334.0	0	Phage capsid family	N/A
Pfam	UHGV-1385666_29	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1385666_29	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1385666_29	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1385666_29	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_30	phrog_749	49.7	0.000000000000053	N/A	unknown function
UniRef90	UHGV-1385666_30	UniRef90_A0A1I3QJG6	59.3	0.00000000278	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1385666_30	349161.Dred_2603	62.0	0.0000000000466	N/A	N/A
PHROG	UHGV-1385666_31	phrog_5635	47.7	0.00000000000029	head-tail adaptor	connector
eggNOG-mapper	UHGV-1385666_31	1121866.AUGK01000006_gene882	56.2	0.0000000146	N/A	N/A
structural_annotation	UHGV-1385666_31	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1385666_32	1121866.AUGK01000006_gene883	56.2	0.0000000128	N/A	N/A
structural_annotation	UHGV-1385666_32	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_33	phrog_5509	94.0	1.2e-27	neck protein	connector
UniRef90	UHGV-1385666_33	UniRef90_W0FMR6	101.0	7.24e-25	Gp9 protein	N/A
eggNOG-mapper	UHGV-1385666_33	1347392.CCEZ01000045_gene11	53.1	0.000000597	N/A	N/A
structural_annotation	UHGV-1385666_33	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-1385666_34	UniRef90_A0A316S919	154.0	3.22299e-44	Phage tail protein	N/A
eggNOG-mapper	UHGV-1385666_34	1384484.AEQU_1175	141.0	6.97999e-40	N/A	N/A
structural_annotation	UHGV-1385666_34	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_36	phrog_5802	42.2	0.000000000014	N/A	unknown function
PHROG	UHGV-1385666_37	phrog_1533	122.6	2.3e-37	tail length tape measure protein	tail
UniRef90	UHGV-1385666_37	UniRef90_UPI00189AF390	279.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1385666_37	931626.Awo_c30950	291.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1385666_37	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1385666_37	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1385666_37	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1385666_37	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_38	phrog_33	51.7	0.000000000000015	distal tail protein Dit	tail
UniRef90	UHGV-1385666_38	UniRef90_A0A3C1HYE9	74.3	0.0000000000024	Phage tail protein	N/A
eggNOG-mapper	UHGV-1385666_38	1414720.CBYM010000001_gene708	89.0	1.26e-18	PFAM Phage tail protein	N/A
Pfam	UHGV-1385666_38	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1385666_38	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1385666_38	PF20195,PF21621,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_39	phrog_3558	178.8	0	tail protein	tail
UniRef90	UHGV-1385666_39	UniRef90_A0A386PHP6	133.0	2.81e-31	Lysin	N/A
eggNOG-mapper	UHGV-1385666_39	641112.ACOK01000073_gene2906	124.0	2.99e-28	Prophage endopeptidase tail	N/A
Pfam	UHGV-1385666_39	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1385666_39	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1385666_39	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1385666_40	phrog_5240	73.1	4.1e-21	tail fiber protein	tail
eggNOG-mapper	UHGV-1385666_40	1354300.AUQY01000002_gene977	64.7	0.0000000141	Pfam PF00395	N/A
COG	UHGV-1385666_40	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
UniRef90	UHGV-1385666_42	UniRef90_UPI00164C2D72	417.0	0	leucine-rich repeat domain-containing protein	N/A
Pfam	UHGV-1385666_42	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-1385666_42	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-1385666_44	phrog_4105	94.6	6.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-1385666_44	657322.FPR_27220	80.9	1.67e-18	N/A	N/A
PHROG	UHGV-1385666_45	phrog_443	57.2	4.8e-16	holin	lysis
UniRef90	UHGV-1385666_45	UniRef90_A0A1I5VN65	88.2	1.21e-21	Phage r1t holin	N/A
eggNOG-mapper	UHGV-1385666_45	1235797.C816_04172	86.3	1.09e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1385666_45	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1385666_45	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1385666_46	K01447	90.3	3e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1385666_46	phrog_1794	99.3	3.4e-29	amidase	lysis
UniRef90	UHGV-1385666_46	UniRef90_UPI0013E049BA	127.0	1.37e-32	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1385666_46	1203606.HMPREF1526_00589	120.0	1.22e-30	Ami_2	N/A
Pfam	UHGV-1385666_46	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1385666_46	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1385666_46	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-1385666_49	UniRef90_A0A373VU48	174.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1385666_49	140626.JHWB01000009_gene1336	57.4	0.00000000884	sequence-specific DNA binding	N/A
Pfam	UHGV-1385666_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1385666_49	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1385666	Yes	30,218	37	72	1
UHGV-0093103	No	17,339	37	46	1