vOTU vOTU-034240

vOTU: vOTU-034240

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034240
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00914 → vGENUS-02225 → vOTU-034240
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0030094
Biosample ID	SAMEA4766303
Genome length (bp)	33,748 bps
CheckV completeness	86.14% (Medium-quality)
CDS count	54
CDS density	94.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	59	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0030094_1	UniRef90_UPI000F0633F9	61.6	0.0000000000188	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0030094_1	1235835.C814_03153	52.0	0.0000000239	N/A	N/A
UniRef90	UHGV-0030094_3	UniRef90_UPI0018C81604	63.9	0.00000000000529	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0030094_3	718252.FP2_06860	62.8	0.00000000000224	N/A	N/A
Pfam	UHGV-0030094_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0030094_3	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0030094_4	K22300	66.7	4.4e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0030094_4	phrog_8	57.7	2.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0030094_4	UniRef90_UPI00047CA4D8	86.7	3.57e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0030094_4	1262914.BN533_01956	91.7	4.24e-22	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0030094_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0030094_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0030094_4	PF13560,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-0030094_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0030094_7	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0030094_8	K14059	132.5	5.1e-39	int; integrase	N/A
PHROG	UHGV-0030094_8	phrog_1	156.9	0	integrase	integration and excision
UniRef90	UHGV-0030094_8	UniRef90_A0A810Q0Y2	391.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0030094_8	693746.OBV_43340	385.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0030094_8	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0030094_8	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0030094_8	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030094_12	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_13	phrog_21357	103.0	2.1e-30	endolysin	lysis
UniRef90	UHGV-0030094_13	UniRef90_UPI0018AB78B4	241.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0030094_13	97139.C824_00684	232.0	0	lysozyme activity	N/A
Pfam	UHGV-0030094_13	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0030094_13	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0030094_13	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0030094_13	PF01471,PF10030,TIGR02594,NF038080,COG3409,COG3942	N/A	N/A	N/A	N/A
KOfam	UHGV-0030094_14	K13023	41.2	0.0000000000026	CPN2; carboxypeptidase N regulatory subunit	N/A
PHROG	UHGV-0030094_14	phrog_35892	109.0	0	N/A	unknown function
Pfam	UHGV-0030094_14	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-0030094_14	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_15	phrog_15594	76.4	2.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0030094_15	1118055.CAGU01000013_gene763	54.3	0.000000033	N/A	N/A
structural_annotation	UHGV-0030094_15	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_16	phrog_918	118.7	1.6e-35	N/A	unknown function
UniRef90	UHGV-0030094_16	UniRef90_UPI000E468F85	127.0	1.13e-36	N/A	N/A
eggNOG-mapper	UHGV-0030094_16	469618.FVAG_01307	117.0	1.64e-33	N/A	N/A
Pfam	UHGV-0030094_16	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0030094_16	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_17	phrog_2428	143.2	6.50202e-43	N/A	unknown function
UniRef90	UHGV-0030094_17	UniRef90_UPI0019D0F68F	142.0	2.04996e-41	ABC transporter ATPase	N/A
eggNOG-mapper	UHGV-0030094_17	1009370.ALO_12376	136.0	2.85e-39	N/A	N/A
dbAPIS	UHGV-0030094_17	APIS024	N/A	N/A	Tad1 proteins are not an enzymes, but are 'sponges' that bind and sequester the immune signaling molecule (cyclic ADP-ribose or gcADPR) produced by TIR-domain proteins, thus decoupling phage sensing from immune effector activation and rendering Thoeris inactive.	N/A
PHROG	UHGV-0030094_18	phrog_881	81.2	6.6e-24	holin	lysis
UniRef90	UHGV-0030094_18	UniRef90_A0A4Q7P349	113.0	1.02e-31	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0030094_18	742740.HMPREF9474_02251	112.0	5.34e-32	Putative phage holin Dp-1	N/A
Pfam	UHGV-0030094_18	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0030094_18	PF16938	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0030094_19	1232443.BAIA02000106_gene3111	61.2	0.000000000128	N/A	N/A
PHROG	UHGV-0030094_20	phrog_372	215.2	0	tail protein	tail
UniRef90	UHGV-0030094_20	UniRef90_R7FHU8	187.0	0	Tail protein	N/A
eggNOG-mapper	UHGV-0030094_20	1211844.CBLM010000023_gene977	96.3	1.04e-17	N/A	N/A
Pfam	UHGV-0030094_20	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0030094_20	PF05895,MF_00791,NF010681,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_21	phrog_6616	416.4	0	tail protein	tail
UniRef90	UHGV-0030094_21	UniRef90_A0A3D3U8S7	387.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0030094_21	33035.JPJF01000043_gene1002	286.0	0	N/A	N/A
PHROG	UHGV-0030094_22	phrog_1194	70.0	2.9e-20	N/A	unknown function
structural_annotation	UHGV-0030094_22	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_23	phrog_1535	142.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0030094_23	UniRef90_A0A1C5P271	184.0	2.38221e-43	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0030094_23	1232453.BAIF02000058_gene1637	120.0	2.14e-24	phage tail tape measure protein	N/A
COG	UHGV-0030094_23	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0030094_23	PF09325	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_24	phrog_706	110.1	1.9e-32	N/A	unknown function
UniRef90	UHGV-0030094_24	UniRef90_A0A173TZF2	211.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0030094_24	411459.RUMOBE_01383	179.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0030094_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0030094_24	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_25	phrog_11299	89.9	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0030094_25	411459.RUMOBE_01382	85.5	2.31e-19	N/A	N/A
structural_annotation	UHGV-0030094_25	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_26	phrog_3099	138.9	2.59997e-41	N/A	unknown function
eggNOG-mapper	UHGV-0030094_26	1304866.K413DRAFT_3043	172.0	0	N/A	N/A
structural_annotation	UHGV-0030094_26	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_27	phrog_3266	64.8	1.1e-18	tail completion	connector
eggNOG-mapper	UHGV-0030094_27	693746.OBV_18140	175.0	0	N/A	N/A
structural_annotation	UHGV-0030094_27	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_28	phrog_556	53.7	0.0000000000000028	minor head protein	head and packaging
UniRef90	UHGV-0030094_28	UniRef90_UPI001F06267A	73.2	0.000000000000169	minor capsid protein	N/A
eggNOG-mapper	UHGV-0030094_28	33035.JPJF01000106_gene3128	67.4	0.00000000000527	N/A	N/A
Pfam	UHGV-0030094_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0030094_28	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030094_29	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_30	phrog_541	59.8	4.4e-17	head-tail adaptor	connector
eggNOG-mapper	UHGV-0030094_30	693746.OBV_18110	120.0	1.24e-33	N/A	N/A
PHROG	UHGV-0030094_32	phrog_422	229.9	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0030094_32	693746.OBV_18090	436.0	0	N/A	N/A
structural_annotation	UHGV-0030094_32	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_33	phrog_194	74.4	1.8e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-0030094_33	UniRef90_UPI00164D9F94	234.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0030094_33	693746.OBV_18080	186.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0030094_33	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0030094_33	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_35	phrog_581	230.9	0	minor head protein	head and packaging
UniRef90	UHGV-0030094_35	UniRef90_UPI0006814CA4	473.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0030094_35	693746.OBV_18050	488.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0030094_35	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0030094_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030094_35	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_36	phrog_533	191.5	0	portal protein	head and packaging
UniRef90	UHGV-0030094_36	UniRef90_UPI000680A1DB	550.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0030094_36	693746.OBV_18040	386.0	0	N/A	N/A
structural_annotation	UHGV-0030094_36	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0030094_38	K06909	121.0	1.2e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0030094_38	phrog_10250	161.1	0	N/A	unknown function
UniRef90	UHGV-0030094_38	UniRef90_A0A3D3Y0N9	593.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0030094_38	1226322.HMPREF1545_00043	560.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0030094_38	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0030094_38	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0030094_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0030094_38	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030094_39	UniRef90_UPI0009523D83	138.0	2.8e-39	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0030094_39	1226322.HMPREF1545_00042	134.0	1.54e-38	N/A	N/A
structural_annotation	UHGV-0030094_39	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_40	phrog_36	57.5	2.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0030094_40	UniRef90_UPI001C10AB33	112.0	3.93e-29	N/A	N/A
eggNOG-mapper	UHGV-0030094_40	580331.Thit_1400	85.9	2.29e-19	N/A	N/A
structural_annotation	UHGV-0030094_40	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_46	phrog_2245	96.0	2.9e-28	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0030094_46	293826.Amet_2596	84.7	4.82e-19	N/A	N/A
UniRef90	UHGV-0030094_48	UniRef90_UPI000DA5F351	104.0	1.57e-27	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0030094_48	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
PHROG	UHGV-0030094_49	phrog_355	55.9	6.7e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030094_49	UniRef90_A0A415G5B2	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0030094_49	397290.C810_05229	155.0	0	N/A	N/A
structural_annotation	UHGV-0030094_49	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_51	phrog_5781	89.1	4.7e-26	N/A	unknown function
UniRef90	UHGV-0030094_51	UniRef90_A0A2V2GDQ1	116.0	8.98e-32	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0030094_51	573061.Clocel_3558	94.4	9.26e-24	N/A	N/A
Pfam	UHGV-0030094_51	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0030094_51	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0030094_51	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0030094_53	K00558	165.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0030094_53	phrog_363	234.0	0	DNA methyltransferase	other
UniRef90	UHGV-0030094_53	UniRef90_A0A4Q7PLB0	294.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0030094_53	693746.OBV_01900	284.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0030094_53	MTase_II_00058	125.1	8.6e-37	Type II methyltransferase	RM
Pfam	UHGV-0030094_53	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0030094_53	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0030094_53	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0030094_53	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0030094_54	phrog_4433	98.6	4.1e-32	N/A	unknown function
Pfam	UHGV-0030094_54	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0030094_54	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0030094	Yes	33,748	54	86	1
UHGV-0031544	No	21,583	55	55	1