vOTU vOTU-034345

vOTU: vOTU-034345

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034345
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00707 → vGENUS-13089 → vOTU-034345
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900548615
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1410472
Biosample ID	SAMN02334095
Genome length (bp)	26,006 bps
CheckV completeness	61.21% (Medium-quality)
CDS count	41
CDS density	91.97%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	48	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900548615	Total connections	56	Host agreement	98.21

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1410472_1	phrog_511	166.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1410472_1	1410650.JHWL01000003_gene2827	295.0	0	N/A	N/A
structural_annotation	UHGV-1410472_1	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_2	phrog_12105	105.8	3e-31	N/A	unknown function
eggNOG-mapper	UHGV-1410472_2	1519439.JPJG01000060_gene1891	76.6	2.44e-16	N/A	N/A
PHROG	UHGV-1410472_3	phrog_15239	54.0	0.0000000000000019	N/A	unknown function
PHROG	UHGV-1410472_4	phrog_1357	274.1	0	major head protein	head and packaging
UniRef90	UHGV-1410472_4	UniRef90_A0A1I0BH03	387.0	0	Major capsid protein, N4-gp56 family	N/A
eggNOG-mapper	UHGV-1410472_4	748224.HMPREF9436_01399	358.0	0	N/A	N/A
Pfam	UHGV-1410472_4	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1410472_4	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1410472_4	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_5	phrog_13908	247.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1410472_5	1410650.JHWL01000003_gene2831	139.0	1.23e-36	N/A	N/A
KOfam	UHGV-1410472_6	K07584	40.0	0.000000000066	N/A	N/A
PHROG	UHGV-1410472_6	phrog_4478	43.0	0.0000000000052	peptidase	other
UniRef90	UHGV-1410472_6	UniRef90_UPI0015B63E39	66.2	0.00000000000564	ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-1410472_6	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1410472_6	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410472_6	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_7	phrog_156	320.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1410472_7	1410650.JHWL01000003_gene2833	592.0	0	N/A	N/A
structural_annotation	UHGV-1410472_7	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1410472_8	K06909	146.9	1.79366e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1410472_8	phrog_979	146.7	5.60519e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1410472_8	UniRef90_UPI0010311CEE	653.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1410472_8	1410650.JHWL01000003_gene2834	616.0	0	N/A	N/A
Pfam	UHGV-1410472_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1410472_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1410472_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410472_9	UniRef90_UPI0018AC41F1	171.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1410472_9	1226322.HMPREF1545_00042	150.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-1410472_9	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_13	phrog_2245	94.4	1.1e-27	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-1410472_13	428125.CLOLEP_01814	89.4	1.01e-20	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-1410472_13	NF001611,COG1694	N/A	N/A	N/A	N/A
KOfam	UHGV-1410472_14	K00558	219.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1410472_14	phrog_116	257.1	0	DNA methyltransferase	other
UniRef90	UHGV-1410472_14	UniRef90_A0A350THX9	805.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1410472_14	1121334.KB911073_gene1852	632.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1410472_14	MTase_II_00164	100.0	2.5e-34	Type II methyltransferase	RM
Pfam	UHGV-1410472_14	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1410472_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1410472_14	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_17	phrog_4632	41.6	0.0000000000011	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410472_17	UniRef90_A0A7X8IB41	122.0	1.48e-33	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1410472_17	469604.HMPREF0946_00819	65.1	0.0000000000079	N/A	N/A
structural_annotation	UHGV-1410472_17	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410472_18	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1410472_19	K03111	136.1	4.00001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1410472_19	phrog_44	136.5	1.8e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410472_19	UniRef90_A0A352RPR0	202.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1410472_19	1007096.BAGW01000023_gene151	189.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1410472_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1410472_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1410472_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1410472_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1410472_19	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_20	phrog_4973	63.9	2.4e-18	N/A	unknown function
UniRef90	UHGV-1410472_20	UniRef90_A0A3D3Y0P8	84.0	9.35e-20	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1410472_20	1072685.IX83_07155	56.6	0.000000000704	Helix-turn-helix domain	N/A
Pfam	UHGV-1410472_20	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1410472_20	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_21	phrog_7566	86.0	2.8e-25	N/A	unknown function
UniRef90	UHGV-1410472_21	UniRef90_A0A8D9UHC0	129.0	4.86e-37	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1410472_21	1007096.BAGW01000031_gene114	105.0	2.92e-28	N/A	N/A
PHROG	UHGV-1410472_22	phrog_374	41.5	0.00000000001	HNH endonuclease	DNA, RNA and nucleotide metabolism
PHROG	UHGV-1410472_23	phrog_72	58.8	2.5e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410472_23	UniRef90_A0A8D9PDS2	194.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1410472_23	445972.ANACOL_01825	122.0	1.26e-32	N/A	N/A
Pfam	UHGV-1410472_23	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-1410472_23	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410472_24	UniRef90_B0PAM4	157.0	1.4013e-45	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-1410472_24	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410472_25	UniRef90_A0A845QLQ8	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410472_25	33035.JPJF01000135_gene5082	117.0	5.47e-30	N/A	N/A
structural_annotation	UHGV-1410472_25	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_27	phrog_1029	157.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1410472_27	552398.HMPREF0866_01625	131.0	9.03e-35	N/A	N/A
structural_annotation	UHGV-1410472_27	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_28	phrog_997	96.2	2.8e-28	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410472_28	UniRef90_R6MCS9	101.0	1.9e-25	N/A	N/A
eggNOG-mapper	UHGV-1410472_28	1519439.JPJG01000059_gene1910	127.0	3.55e-36	N/A	N/A
KOfam	UHGV-1410472_31	K07319	98.5	5.1e-29	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1410472_31	phrog_16	226.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410472_31	UniRef90_A0A1Q6JHY3	1687.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-1410472_31	1007096.BAGW01000031_gene119	1336.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-1410472_31	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1410472_31	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1410472_31	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1410472_31	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410472_33	PF11112,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410472_36	UniRef90_A0A328UFC2	63.5	0.00000000000676	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1410472_36	693746.OBV_43290	55.1	0.0000000119	addiction module antidote protein HigA	N/A
Pfam	UHGV-1410472_36	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1410472_36	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1410472_36	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1410472_37	K01356	55.8	9.4e-16	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1410472_37	phrog_4	98.4	5.7e-29	transcriptional repressor	transcription regulation
UniRef90	UHGV-1410472_37	UniRef90_G4KRC4	262.0	0	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-1410472_37	693746.OBV_01960	262.0	0	Peptidase S24-like	N/A
Pfam	UHGV-1410472_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1410472_37	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1410472_37	COG0864	N/A	N/A	Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain	N/A
structural_annotation	UHGV-1410472_37	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-1410472_39	phrog_3292	45.7	0.00000000000096	N/A	unknown function
UniRef90	UHGV-1410472_39	UniRef90_UPI0018AD0A6B	58.2	0.00000000833	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-1410472_39	1173028.ANKO01000174_gene2719	57.4	0.0000000151	KTSC domain	N/A
Pfam	UHGV-1410472_39	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-1410472_39	COG4249	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410472_39	PF13619	N/A	N/A	N/A	N/A
KOfam	UHGV-1410472_40	K22300	58.1	2e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1410472_40	phrog_2439	47.0	0.00000000000031	transcriptional regulator	transcription regulation
UniRef90	UHGV-1410472_40	UniRef90_UPI0014126470	76.6	1.98e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1410472_40	658655.HMPREF0988_01045	77.8	1.32e-16	Helix-turn-helix domain	N/A
Pfam	UHGV-1410472_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1410472_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1410472_40	PF13560,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1410472_41	K14059	163.2	0	int; integrase	N/A
PHROG	UHGV-1410472_41	phrog_1	167.2	0	integrase	integration and excision
UniRef90	UHGV-1410472_41	UniRef90_A0A1C5W824	523.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1410472_41	693746.OBV_41260	297.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1410472_41	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1410472_41	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1410472_41	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1410472	Yes	26,006	59	61	1
UHGV-1400992	No	22,252	59	50	1