vOTU vOTU-034346

vOTU: vOTU-034346

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034346
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00538 → vGENUS-01144 → vOTU-034346
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1401047
Biosample ID	N/A
Genome length (bp)	38,932 bps
CheckV completeness	66.81% (Medium-quality)
CDS count	71
CDS density	82.61%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	35	Host agreement	74.29
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	6	Host agreement	50

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.81)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1401047_1	K00558	180.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1401047_1	phrog_116	190.7	0	DNA methyltransferase	other
UniRef90	UHGV-1401047_1	UniRef90_C0BC27	514.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1401047_1	411470.RUMGNA_00198	310.0	0	N/A	N/A
PADLOC	UHGV-1401047_1	MTase_II_00058	192.5	0	Type II methyltransferase	RM
Pfam	UHGV-1401047_1	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1401047_1	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1401047_1	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1401047_1	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1401047_2	K00558	51.7	0.0000000000000093	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1401047_2	phrog_8411	131.5	4.5e-40	N/A	unknown function
UniRef90	UHGV-1401047_2	UniRef90_A0A415D516	249.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1401047_2	411470.RUMGNA_00199	236.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1401047_2	oMTase_00023	95.6	1.4013e-43	orphan methyltransferase	RM
Pfam	UHGV-1401047_2	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1401047_2	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1401047_5	PF06442,MF_01194,NF000331,COG4014	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_6	phrog_25456	59.4	3e-18	N/A	unknown function
PHROG	UHGV-1401047_7	phrog_924	47.1	0.00000000000054	N/A	unknown function
UniRef90	UHGV-1401047_7	UniRef90_A0A893WE10	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-1401047_7	411461.DORFOR_01155	107.0	4.11e-29	N/A	N/A
Pfam	UHGV-1401047_7	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1401047_7	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_8	phrog_599	44.2	0.0000000000039	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1401047_8	UniRef90_UPI0018AC8B9B	135.0	2.45e-40	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-1401047_8	96561.Dole_0257	50.1	0.000000965	DNA-directed DNA polymerase activity	N/A
Pfam	UHGV-1401047_8	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1401047_8	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
COG	UHGV-1401047_8	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-1401047_8	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_9	phrog_20593	52.9	0.000000000000003	N/A	unknown function
PHROG	UHGV-1401047_11	phrog_22292	109.4	2.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-1401047_11	526218.Sterm_0798	49.7	0.00000545	N/A	N/A
PHROG	UHGV-1401047_12	phrog_8684	86.2	3.6e-26	N/A	unknown function
UniRef90	UHGV-1401047_12	UniRef90_UPI000CF845A0	271.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1401047_12	1235800.C819_02639	105.0	3.24e-27	YopX protein	N/A
Pfam	UHGV-1401047_12	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1401047_12	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1401047_12	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_14	phrog_236	68.8	1.3e-19	nucleotide kinase	other
UniRef90	UHGV-1401047_14	UniRef90_A0A893WCU2	194.0	0	N/A	N/A
eggNOG-mapper	UHGV-1401047_14	641149.HMPREF9016_01178	62.8	0.0000000000294	N/A	N/A
Pfam	UHGV-1401047_14	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1401047_14	PF11753	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1401047_15	411470.RUMGNA_02040	51.6	0.000000431	N/A	N/A
PHROG	UHGV-1401047_17	phrog_16129	57.7	9.7e-17	excisionase	integration and excision
UniRef90	UHGV-1401047_17	UniRef90_A0A3R6K9H8	138.0	1.82e-39	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1401047_17	658088.HMPREF0987_01415	81.6	8.69e-19	Excisionase from transposon Tn916	N/A
Pfam	UHGV-1401047_17	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
Pfam	UHGV-1401047_17	PF09035	N/A	N/A	Excisionase from transposon Tn916	Tn916-Xis
NCBIFam	UHGV-1401047_17	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1401047_17	PF09035,PF00196,MF_00674,NF033787,NF008895,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1401047_18	K14059	239.5	0	int; integrase	N/A
PHROG	UHGV-1401047_18	phrog_1	204.1	0	integrase	integration and excision
UniRef90	UHGV-1401047_18	UniRef90_A0A412RQS9	478.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1401047_18	742733.HMPREF9469_03088	348.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1401047_18	PF02920	N/A	N/A	DNA binding domain of tn916 integrase	Integrase_DNA
Pfam	UHGV-1401047_18	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1401047_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1401047_18	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1401047_18	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1401047_19	658655.HMPREF0988_00920	47.0	0.00000216	N/A	N/A
eggNOG-mapper	UHGV-1401047_20	658655.HMPREF0988_00919	103.0	8.91e-26	N/A	N/A
structural_annotation	UHGV-1401047_20	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1401047_21	658655.HMPREF0988_00918	64.3	0.000000000000977	N/A	N/A
PHROG	UHGV-1401047_22	phrog_16490	66.3	5.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1401047_22	397290.C810_01328	67.0	0.0000000000287	N/A	N/A
eggNOG-mapper	UHGV-1401047_23	658655.HMPREF0988_00915	120.0	6.96e-31	N/A	N/A
eggNOG-mapper	UHGV-1401047_24	397290.C810_01336	105.0	3e-28	N/A	N/A
PHROG	UHGV-1401047_25	phrog_130	184.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1401047_25	UniRef90_A0A2Z4UD85	386.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1401047_25	658655.HMPREF0988_00912	316.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-1401047_25	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1401047_25	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1401047_25	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1401047_25	PF03374,PF02498,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_26	phrog_9418	132.2	2.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-1401047_26	658655.HMPREF0988_00910	171.0	0	N/A	N/A
structural_annotation	UHGV-1401047_26	PF10233	N/A	N/A	N/A	N/A
UniRef90	UHGV-1401047_27	UniRef90_A0A8D9UIC9	53.1	0.0000000524	Alginate and motility regulator	N/A
eggNOG-mapper	UHGV-1401047_27	658655.HMPREF0988_00909	50.4	0.000000107	N/A	N/A
Pfam	UHGV-1401047_27	PF12651	N/A	N/A	Ribbon-helix-helix domain	RHH_3
structural_annotation	UHGV-1401047_27	PF01402,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-1401047_30	UniRef90_R9JJZ1	70.9	0.00000000000000742	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1401047_30	397287.C807_01320	70.9	0.00000000000000124	N/A	N/A
structural_annotation	UHGV-1401047_30	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_32	phrog_373	76.8	7.3e-24	anti-repressor	transcription regulation
UniRef90	UHGV-1401047_32	UniRef90_R9K3E2	117.0	2.26e-29	Rha family phage regulatory protein	N/A
eggNOG-mapper	UHGV-1401047_32	1235792.C808_03051	117.0	3.79e-30	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1401047_32	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1401047_32	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1401047_32	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1401047_32	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
COG	UHGV-1401047_35	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A
PHROG	UHGV-1401047_38	phrog_31631	44.5	0.0000000000019	N/A	unknown function
eggNOG-mapper	UHGV-1401047_38	658655.HMPREF0988_00903	46.2	0.00000664	N/A	N/A
eggNOG-mapper	UHGV-1401047_39	1378168.N510_01336	50.4	0.00000017	N/A	N/A
eggNOG-mapper	UHGV-1401047_40	397290.C810_01353	155.0	5.60519e-45	N/A	N/A
PHROG	UHGV-1401047_42	phrog_1233	86.2	4.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-1401047_42	411490.ANACAC_00786	87.8	1.29e-20	N/A	N/A
KOfam	UHGV-1401047_46	K04087	80.4	1.8e-23	hflC; modulator of FtsH protease HflC	N/A
PHROG	UHGV-1401047_46	phrog_200	169.7	0	lipoprotein	other
UniRef90	UHGV-1401047_46	UniRef90_C0BA46	473.0	0	SPFH/Band 7/PHB domain protein	N/A
eggNOG-mapper	UHGV-1401047_46	537007.BLAHAN_05484	297.0	0	prohibitin homologues	N/A
Pfam	UHGV-1401047_46	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-1401047_46	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-1401047_46	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_54	phrog_38	169.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1401047_54	UniRef90_A0A318EQM2	524.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1401047_54	1123263.AUKY01000015_gene1608	327.0	0	chromosome segregation	N/A
COG	UHGV-1401047_54	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1401047_54	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_55	phrog_36	59.9	4.9e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1401047_55	UniRef90_A0A7C6JU72	70.1	0.00000000000171	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1401047_55	397290.C810_01391	89.0	1.32e-20	N/A	N/A
Pfam	UHGV-1401047_55	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1401047_55	PF04545,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_56	phrog_64	139.5	1.90002e-41	portal protein	head and packaging
UniRef90	UHGV-1401047_56	UniRef90_R6CA99	557.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1401047_56	1298920.KI911353_gene2663	427.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1401047_56	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1401047_56	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1401047_57	K01448	43.2	0.0000000000043	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1401047_57	phrog_2742	81.4	1.3e-23	endolysin	lysis
UniRef90	UHGV-1401047_57	UniRef90_A0A173ZHV9	702.0	0	Clostridial hydrophobic W	N/A
eggNOG-mapper	UHGV-1401047_57	411462.DORLON_00764	249.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1401047_57	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1401047_57	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-1401047_57	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1401047_57	PF01520,TIGR02883,COG5492,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_59	phrog_909	78.0	9.6e-23	major head protein	head and packaging
UniRef90	UHGV-1401047_59	UniRef90_R7BGI8	199.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1401047_59	1536772.R70723_06665	57.8	0.00000000291	N/A	N/A
PHROG	UHGV-1401047_60	phrog_29	174.3	0	major head protein	head and packaging
UniRef90	UHGV-1401047_60	UniRef90_A0A1C5WIT9	592.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1401047_60	1347368.HG964404_gene4993	159.0	5.57717e-43	Phage major capsid protein E	N/A
Pfam	UHGV-1401047_60	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1401047_60	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1401047_61	UniRef90_A0A416G2T8	58.9	0.00000000108	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1401047_61	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_63	phrog_4105	86.5	1.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1401047_63	411459.RUMOBE_00911	141.0	2.51953e-42	N/A	N/A
PHROG	UHGV-1401047_64	phrog_1129	66.4	3e-19	holin	lysis
UniRef90	UHGV-1401047_64	UniRef90_A0A3D5IBP7	131.0	5.14e-38	Enolase	N/A
eggNOG-mapper	UHGV-1401047_64	411461.DORFOR_00721	103.0	6.33e-28	N/A	N/A
Pfam	UHGV-1401047_64	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1401047_64	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1401047_65	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1401047_66	phrog_5	48.9	0.00000000000015	tail completion or Neck1 protein	connector
UniRef90	UHGV-1401047_66	UniRef90_UPI001BBD4500	125.0	2.25e-33	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1401047_66	397290.C810_01411	127.0	9.12e-35	N/A	N/A
Pfam	UHGV-1401047_66	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1401047_66	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1401047_67	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1401047_68	UniRef90_A0A8D9PGN2	181.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1401047_68	1232453.BAIF02000058_gene1634	54.3	0.0000004	N/A	N/A
structural_annotation	UHGV-1401047_68	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1401047_69	UniRef90_UPI001D0975F6	101.0	3.6e-25	N/A	N/A
PHROG	UHGV-1401047_71	phrog_1535	141.1	7.84727e-44	tail length tape measure protein	tail
UniRef90	UHGV-1401047_71	UniRef90_A0A173S7X9	324.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1401047_71	1232453.BAIF02000058_gene1637	266.0	0	phage tail tape measure protein	N/A
COG	UHGV-1401047_71	COG5412	N/A	N/A	Phage-related protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1401047	Yes	38,932	38	67	1
UHGV-1603363	No	24,346	37	42	1