vOTU vOTU-034715

vOTU: vOTU-034715

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034715
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00237 → vGENUS-03527 → vOTU-034715
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1419392
Biosample ID	N/A
Genome length (bp)	24,329 bps
CheckV completeness	69.48% (Medium-quality)
CDS count	33
CDS density	96.28%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	3	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus timonensis	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1419392_1	K01160	57.0	5.5e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1419392_1	phrog_140	155.7	0	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1419392_1	UniRef90_UPI00094E1D80	277.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1419392_1	1035189.HMPREF9954_0297	251.0	0	holliday junction resolvase	N/A
Pfam	UHGV-1419392_1	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1419392_1	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1419392_1	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_2	phrog_884	111.4	3.6e-33	N/A	unknown function
UniRef90	UHGV-1419392_2	UniRef90_UPI00094E02E4	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419392_2	365659.smi_0433	61.6	0.0000000000366	N/A	N/A
Pfam	UHGV-1419392_2	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1419392_2	PF07116	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_3	phrog_2131	153.0	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1419392_3	UniRef90_O34053	211.0	0	ORF22	N/A
eggNOG-mapper	UHGV-1419392_3	85154.O34053_BPO12	211.0	0	N/A	N/A
PHROG	UHGV-1419392_4	phrog_715	112.0	3.2e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-1419392_4	UniRef90_UPI000AF3E45C	224.0	0	MazG-like family protein	N/A
eggNOG-mapper	UHGV-1419392_4	1403390.U3PBR4_9CAUD	100.0	5.66e-26	sequence-specific DNA binding	N/A
Pfam	UHGV-1419392_4	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-1419392_4	PF12643,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
KOfam	UHGV-1419392_5	K22299	42.5	0.000000000014	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1419392_5	phrog_8	50.3	0.000000000000053	transcriptional regulator	transcription regulation
UniRef90	UHGV-1419392_5	UniRef90_UPI00094E9A05	117.0	8.41e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1419392_5	1408416.JNJT01000010_gene937	53.9	0.000000108	sequence-specific DNA binding	N/A
PADLOC	UHGV-1419392_5	retron_type_VI_hth_cluster2_1	43.4	0.0000000000083	N/A	Retron
Pfam	UHGV-1419392_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1419392_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1419392_5	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_6	phrog_121	104.5	8.8e-31	N/A	unknown function
UniRef90	UHGV-1419392_6	UniRef90_UPI00094F2227	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419392_6	1005705.HMPREF9967_1027	149.0	3.01279e-43	N/A	N/A
Pfam	UHGV-1419392_6	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1419392_6	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_7	phrog_17871	67.0	2.1e-19	N/A	unknown function
UniRef90	UHGV-1419392_7	UniRef90_UPI00094E70CD	106.0	2.37e-29	topoisomerase	N/A
PHROG	UHGV-1419392_8	phrog_4455	92.2	2.9e-27	N/A	unknown function
UniRef90	UHGV-1419392_8	UniRef90_A0A4J2CRE4	94.7	1.24e-23	N/A	N/A
PHROG	UHGV-1419392_9	phrog_36	108.9	3.9e-32	transcriptional regulator	transcription regulation
UniRef90	UHGV-1419392_9	UniRef90_A0A064C5U2	244.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419392_9	1214217.ALNF01000014_gene1384	230.0	0	N/A	N/A
Pfam	UHGV-1419392_9	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1419392_9	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_10	phrog_509	267.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-1419392_10	UniRef90_UPI001CC05E91	317.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1419392_10	1035189.HMPREF9954_0301	268.0	0	DNA packaging	N/A
Pfam	UHGV-1419392_10	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-1419392_10	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-1419392_10	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1419392_10	NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-1419392_11	K06909	292.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1419392_11	phrog_3717	170.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1419392_11	UniRef90_G5KEP9	836.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1419392_11	764291.STRUR_2108	836.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-1419392_11	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1419392_11	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1419392_11	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1419392_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1419392_11	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_12	phrog_533	623.0	0	portal protein	head and packaging
UniRef90	UHGV-1419392_12	UniRef90_UPI00094E2DA3	914.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1419392_12	764291.STRUR_2107	847.0	0	portal protein	N/A
Pfam	UHGV-1419392_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1419392_12	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1419392_12	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1419392_13	K11044	51.9	0.000000000000012	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-1419392_13	phrog_581	408.7	0	minor head protein	head and packaging
UniRef90	UHGV-1419392_13	UniRef90_A0A4D6B3C1	995.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1419392_13	1035189.HMPREF9954_0304	676.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1419392_13	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1419392_13	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-1419392_13	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1419392_13	PF06152,PF03496,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_15	phrog_194	133.8	1.2e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-1419392_15	UniRef90_UPI00094F12CC	349.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1419392_15	646413.C5IUJ4_9CAUD	218.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1419392_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1419392_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_16	phrog_422	223.9	0	major head protein	head and packaging
UniRef90	UHGV-1419392_16	UniRef90_A0A1X1KL37	437.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1419392_16	1035189.HMPREF9954_0307	435.0	0	N/A	N/A
structural_annotation	UHGV-1419392_16	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_17	phrog_10018	72.8	2.8e-21	N/A	unknown function
PHROG	UHGV-1419392_18	phrog_2910	70.9	1.5e-20	N/A	unknown function
UniRef90	UHGV-1419392_18	UniRef90_F9PZ37	89.4	3.81e-22	Conserved domain protein	N/A
structural_annotation	UHGV-1419392_18	PF20873	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_19	phrog_541	100.6	1.1e-29	head-tail adaptor	connector
UniRef90	UHGV-1419392_19	UniRef90_A0A501VK26	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419392_19	764291.STRUR_2099	202.0	0	N/A	N/A
PHROG	UHGV-1419392_20	phrog_793	127.5	4.5e-38	head-tail adaptor	connector
UniRef90	UHGV-1419392_20	UniRef90_UPI00094E7DA0	236.0	0	putative minor capsid protein	N/A
eggNOG-mapper	UHGV-1419392_20	537874.B3GW07_9CAUD	114.0	1.49e-31	Minor capsid protein	N/A
Pfam	UHGV-1419392_20	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1419392_20	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_21	phrog_556	94.7	6.9e-28	minor head protein	head and packaging
UniRef90	UHGV-1419392_21	UniRef90_UPI00094F08CC	240.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1419392_21	646413.C5IUJ8_9CAUD	164.0	0	Minor capsid protein	N/A
Pfam	UHGV-1419392_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1419392_21	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_22	phrog_913	154.2	0	minor head protein	head and packaging
UniRef90	UHGV-1419392_22	UniRef90_UPI00094E56EF	267.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1419392_22	764299.STRIC_2534	167.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1419392_22	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1419392_22	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_23	phrog_820	170.6	0	major tail protein	tail
UniRef90	UHGV-1419392_23	UniRef90_UPI00094E9B67	307.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1419392_23	764291.STRUR_2095	266.0	0	N/A	N/A
structural_annotation	UHGV-1419392_23	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_24	phrog_1061	81.6	1e-23	N/A	unknown function
UniRef90	UHGV-1419392_24	UniRef90_A0A139RN56	198.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419392_24	1035189.HMPREF9954_0315	199.0	0	N/A	N/A
structural_annotation	UHGV-1419392_24	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_25	phrog_706	211.2	0	N/A	unknown function
UniRef90	UHGV-1419392_25	UniRef90_UPI00094E88FB	384.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1419392_25	1035189.HMPREF9954_0316	351.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1419392_25	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1419392_25	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_26	phrog_1204	975.1	0	tail protein	tail
UniRef90	UHGV-1419392_26	UniRef90_UPI00094EDD5E	1301.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1419392_26	1035189.HMPREF9954_0317	746.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1419392_26	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1419392_26	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1419392_26	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1419392_27	phrog_33	90.1	3.9e-26	distal tail protein Dit	tail
UniRef90	UHGV-1419392_27	UniRef90_UPI00094F352E	475.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1419392_27	173707.Q938K2_9CAUD	343.0	0	Phage tail protein	N/A
NCBIFam	UHGV-1419392_27	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1419392_27	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_28	phrog_2270	397.8	0	N/A	unknown function
UniRef90	UHGV-1419392_28	UniRef90_UPI0012BD39E8	610.0	0	carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1419392_28	764299.STRIC_2540	626.0	0	N/A	N/A
NCBIFam	UHGV-1419392_28	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1419392_28	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1419392_28	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_30	phrog_1554	209.8	0	N/A	unknown function
UniRef90	UHGV-1419392_30	UniRef90_A0A359YI08	173.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419392_30	1005705.HMPREF9967_1055	299.0	0	N/A	N/A
structural_annotation	UHGV-1419392_30	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_31	phrog_199	56.3	3.9e-16	holin	lysis
UniRef90	UHGV-1419392_31	UniRef90_A0A3R9KVL9	244.0	0	Holin family protein	N/A
eggNOG-mapper	UHGV-1419392_31	413066.A1EAB5_9CAUD	162.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1419392_31	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1419392_31	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1419392_31	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1419392_32	phrog_608	143.2	6.30584e-43	holin	lysis
UniRef90	UHGV-1419392_32	UniRef90_UPI00115BDBC0	189.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1419392_32	1000588.HMPREF9965_1685	183.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1419392_32	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1419392_32	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1419392_33	phrog_998	323.3	0	endolysin	lysis
UniRef90	UHGV-1419392_33	UniRef90_UPI00094EBA44	464.0	0	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-1419392_33	59241.E7DNC3_BPDP1	424.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1419392_33	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1419392_33	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
structural_annotation	UHGV-1419392_33	PF19127,PF05382,TIGR04035,NF008096,COG5263,COG3942	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1419392	Yes	24,329	40	69	1
UHGV-1802019	No	13,758	40	39	1