vOTU vOTU-034729

vOTU: vOTU-034729

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034729
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00087 → vGENUS-00253 → vOTU-034729
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1433740
Biosample ID	SAMN02333997
Genome length (bp)	31,247 bps
CheckV completeness	85.38% (Medium-quality)
CDS count	48
CDS density	91.37%
tRNA count	6
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	167	Host agreement	98.2
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715	Total connections	104	Host agreement	77.88

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1433740_1	K14059	217.0	0	int; integrase	N/A
PHROG	UHGV-1433740_1	phrog_1	204.7	0	integrase	integration and excision
UniRef90	UHGV-1433740_1	UniRef90_A0A6N9L4Z3	728.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1433740_1	1122173.AXVL01000018_gene468	206.0	0	Pfam:Integrase_AP2	N/A
Pfam	UHGV-1433740_1	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1433740_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1433740_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1433740_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1433740_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1433740_2	K14056	41.5	0.00000000002	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-1433740_2	phrog_8	43.6	0.0000000000065	transcriptional regulator	transcription regulation
UniRef90	UHGV-1433740_2	UniRef90_UPI001C38C99F	147.0	8.40779e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1433740_2	1078085.HMPREF1210_01183	49.3	0.0000029	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1433740_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1433740_2	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1433740_2	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1433740_3	K01356	118.4	9.1e-35	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1433740_3	phrog_4	131.4	7.5e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-1433740_3	UniRef90_E2NR67	434.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1433740_3	552396.HMPREF0863_02447	151.0	3.1249e-43	Represses a number of genes involved in the response to DNA damage (SOS response)	N/A
Pfam	UHGV-1433740_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1433740_3	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1433740_3	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1433740_3	PF01381,PF00717,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1433740_4	K07729	51.8	0.000000000000018	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1433740_4	phrog_8	46.1	0.0000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-1433740_4	UniRef90_E2NR68	137.0	6.59998e-41	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1433740_4	642492.Clole_1473	54.7	0.0000000548	sequence-specific DNA binding	N/A
Pfam	UHGV-1433740_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1433740_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1433740_5	K07741	131.8	1.1e-38	antB; anti-repressor protein	N/A
PHROG	UHGV-1433740_5	phrog_130	264.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1433740_5	UniRef90_UPI001C38B6C0	389.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1433740_5	1232452.BAIB02000007_gene1603	299.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1433740_5	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1433740_5	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1433740_5	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1433740_5	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1433740_6	cluster_116087	74.3	1.16e-20	NA	N/A
PHROG	UHGV-1433740_10	phrog_434	162.1	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433740_10	UniRef90_A0A6N9L4Y3	446.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1433740_10	888055.HMPREF9015_01894	127.0	9.69e-34	YqaJ viral recombinase family	N/A
Pfam	UHGV-1433740_10	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1433740_10	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1433740_10	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1433740_10	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_11	phrog_674	78.4	9.5e-23	N/A	unknown function
UniRef90	UHGV-1433740_11	UniRef90_UPI0006BF03D4	645.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433740_11	445335.CBN_1354	57.0	0.00000289	N/A	N/A
Pfam	UHGV-1433740_11	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1433740_11	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1433740_12	K07455	211.4	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1433740_12	phrog_148	226.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433740_12	UniRef90_A0A6N9L4X4	598.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1433740_12	1095750.HMPREF9970_1675	367.0	0	RecT family	N/A
Pfam	UHGV-1433740_12	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1433740_12	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1433740_12	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1433740_12	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_13	phrog_2514	59.3	1.3e-17	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433740_13	UniRef90_UPI001C395B09	276.0	0	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1433740_13	1140002.I570_01458	61.2	0.0000000388	DnaD domain protein	N/A
COG	UHGV-1433740_13	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1433740_13	PF09681,NF033788,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_15	phrog_22292	126.6	1.2e-37	N/A	unknown function
eggNOG-mapper	UHGV-1433740_15	1232446.BAIE02000041_gene2433	68.6	0.00000000000158	N/A	N/A
PHROG	UHGV-1433740_19	phrog_6072	44.9	0.0000000000022	N/A	unknown function
KOfam	UHGV-1433740_21	K03111	150.0	2.24208e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1433740_21	phrog_44	157.5	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433740_21	UniRef90_A0A6N9L4V1	274.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1433740_21	1211844.CBLM010000119_gene3417	160.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1433740_21	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1433740_21	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1433740_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1433740_21	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1433740_21	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_22	phrog_190	131.1	6.8e-39	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433740_22	UniRef90_UPI0006C03F37	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433740_22	525255.HMPREF0077_0413	100.0	5.67e-26	N/A	N/A
Pfam	UHGV-1433740_22	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1433740_22	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_24	phrog_36	47.0	0.00000000000048	transcriptional regulator	transcription regulation
COG	UHGV-1433740_24	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
KOfam	UHGV-1433740_25	K03497	60.6	3.1e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1433740_25	phrog_940	393.3	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433740_25	UniRef90_R6DKE7	442.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1433740_25	1232449.BAHV02000018_gene1534	416.0	0	N/A	N/A
PADLOC	UHGV-1433740_25	MTase_II_00015	91.3	1.5e-26	Type II methyltransferase	RM
Pfam	UHGV-1433740_25	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1433740_25	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1433740_25	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1433740_25	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_28	phrog_9479	73.7	2.7e-21	N/A	unknown function
PHROG	UHGV-1433740_29	phrog_2412	85.0	7.7e-25	N/A	unknown function
UniRef90	UHGV-1433740_29	UniRef90_UPI001C38E948	225.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-1433740_29	1125712.HMPREF1316_1524	64.3	0.0000000000178	N/A	N/A
Pfam	UHGV-1433740_29	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
structural_annotation	UHGV-1433740_29	PF18932	N/A	N/A	N/A	N/A
KOfam	UHGV-1433740_30	K06909	363.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1433740_30	phrog_3717	167.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1433740_30	UniRef90_A0A6N9L4W9	796.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1433740_30	445974.CLORAM_02936	736.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1433740_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1433740_30	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1433740_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1433740_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1433740_30	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_31	phrog_64	392.9	0	portal protein	head and packaging
UniRef90	UHGV-1433740_31	UniRef90_A0A6N9L3D6	882.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1433740_31	445974.CLORAM_02935	476.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1433740_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1433740_31	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1433740_31	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_32	phrog_115	330.2	0	minor head protein	head and packaging
UniRef90	UHGV-1433740_32	UniRef90_UPI001C387790	744.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1433740_32	1504823.CCMM01000008_gene1046	571.0	0	cell adhesion	N/A
Pfam	UHGV-1433740_32	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1433740_32	PF14424	N/A	N/A	The BURPS668_1122 family of deaminases	Toxin-deaminase
NCBIFam	UHGV-1433740_32	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1433740_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1433740_32	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_34	phrog_3675	114.9	2.9e-34	N/A	unknown function
UniRef90	UHGV-1433740_34	UniRef90_A0A0E4H649	120.0	4.4e-33	YjcQ protein	N/A
eggNOG-mapper	UHGV-1433740_34	1120978.KB894082_gene1061	140.0	6.18954e-42	YjcQ protein	N/A
Pfam	UHGV-1433740_34	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1433740_34	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_35	phrog_30609	66.3	4.9e-19	N/A	unknown function
structural_annotation	UHGV-1433740_35	PF21485	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_36	phrog_172	158.3	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1433740_36	UniRef90_A0A6N9L4V5	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433740_36	445974.CLORAM_02931	128.0	1.38e-34	N/A	N/A
Pfam	UHGV-1433740_36	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1433740_36	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_37	phrog_422	298.7	0	major head protein	head and packaging
UniRef90	UHGV-1433740_37	UniRef90_A0A2H4JCM6	302.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1433740_37	1211844.CBLM010000016_gene1491	303.0	0	N/A	N/A
structural_annotation	UHGV-1433740_37	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_38	phrog_2724	63.1	4.7e-18	N/A	unknown function
UniRef90	UHGV-1433740_38	UniRef90_A0A6N9L4P9	158.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-1433740_38	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1433740_38	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1433740_38	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_39	phrog_132	42.1	0.000000000013	head-tail adaptor	connector
UniRef90	UHGV-1433740_39	UniRef90_UPI001C101B39	54.3	0.000000262	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1433740_39	1235800.C819_00483	56.6	0.00000000811	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1433740_39	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1433740_39	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_40	phrog_2168	91.8	5.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1433740_40	1280689.AUJC01000003_gene969	79.3	8.86e-18	N/A	N/A
structural_annotation	UHGV-1433740_40	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_41	phrog_5	71.3	1.5e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-1433740_41	UniRef90_A0A6N9L3B6	342.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1433740_41	742733.HMPREF9469_01819	155.0	1.4013e-45	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1433740_41	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1433740_41	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1433740_41	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_42	phrog_78	55.9	7.8e-16	tail terminator	connector
eggNOG-mapper	UHGV-1433740_42	1504823.CCMM01000008_gene1036	138.0	1.01e-40	N/A	N/A
structural_annotation	UHGV-1433740_42	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_43	phrog_158	77.7	2.1e-22	major tail protein	tail
UniRef90	UHGV-1433740_43	UniRef90_A0A6N9L2K6	250.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1433740_43	445974.CLORAM_02924	179.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1433740_43	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1433740_43	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_44	phrog_183	58.4	1.3e-16	tail chaperone protein	tail
UniRef90	UHGV-1433740_44	UniRef90_UPI0011C9B36A	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433740_44	445974.CLORAM_02923	117.0	4.66e-32	N/A	N/A
Pfam	UHGV-1433740_44	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1433740_44	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1433740_46	phrog_1535	306.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1433740_46	UniRef90_UPI0006DC6310	1369.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1433740_46	650150.ERH_0621	332.0	0	tape measure	N/A
Pfam	UHGV-1433740_46	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1433740_46	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1433740_46	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1433740_47	phrog_1194	84.3	1.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1433740_47	1504823.CCMM01000008_gene1031	189.0	0	N/A	N/A
Pfam	UHGV-1433740_47	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1433740_47	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1433740_48	445974.CLORAM_02919	491.0	0	cellulase activity	N/A
COG	UHGV-1433740_48	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1433740	Yes	31,247	38	85	1
UHGV-1420177	No	24,318	37	66	1