vOTU vOTU-034856

vOTU: vOTU-034856

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034856
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-17821 → vOTU-034856
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1426895
Biosample ID	SAMEA3182062
Genome length (bp)	33,109 bps
CheckV completeness	73.85% (Medium-quality)
CDS count	42
CDS density	94.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	164	Host agreement	84.15
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	73	Host agreement	82.19

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 73.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1426895_1	phrog_58	117.5	1.5e-34	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1426895_1	1321782.HMPREF1986_02276	185.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1426895_1	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1426895_2	phrog_36410	87.3	9.6e-26	N/A	unknown function
UniRef90	UHGV-1426895_2	UniRef90_U2UNP8	490.0	0	Phage tail component protein	N/A
eggNOG-mapper	UHGV-1426895_2	1321782.HMPREF1986_02277	490.0	0	PFAM Phage tail protein	N/A
COG	UHGV-1426895_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1426895_2	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_3	phrog_538	256.4	0	minor tail protein	tail
UniRef90	UHGV-1426895_3	UniRef90_UPI00188AE414	511.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1426895_3	1321782.HMPREF1986_02278	561.0	0	N/A	N/A
Pfam	UHGV-1426895_3	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1426895_3	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_4	phrog_1220	175.9	0	head protein	head and packaging
UniRef90	UHGV-1426895_4	UniRef90_A0A2X0ZY62	124.0	7.99e-30	Phage structural protein, truncation	N/A
eggNOG-mapper	UHGV-1426895_4	1321782.HMPREF1986_02279	392.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1426895_4	PF20747	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426895_5	UniRef90_A0A1C6L0B1	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-1426895_5	1235802.C823_01049	211.0	0	N/A	N/A
structural_annotation	UHGV-1426895_5	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426895_6	97139.C824_00240	82.0	4.19e-17	N/A	N/A
structural_annotation	UHGV-1426895_6	PF05635,NF008912	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426895_10	742733.HMPREF9469_05015	78.2	2.84e-17	N/A	N/A
structural_annotation	UHGV-1426895_10	PF07238	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_11	phrog_1382	50.8	0.000000000000016	N/A	unknown function
UniRef90	UHGV-1426895_11	UniRef90_A0A844DM60	45.8	0.00000861	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1426895_11	1140002.I570_03996	44.7	0.00000415	N/A	N/A
NCBIFam	UHGV-1426895_11	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1426895_11	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_12	phrog_1382	58.6	6.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1426895_12	411902.CLOBOL_00118	55.1	0.000000000721	N/A	N/A
NCBIFam	UHGV-1426895_12	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1426895_12	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_13	phrog_199	86.8	2.2e-25	holin	lysis
UniRef90	UHGV-1426895_13	UniRef90_A0A1Y4IFZ9	277.0	0	Holin	N/A
eggNOG-mapper	UHGV-1426895_13	742740.HMPREF9474_02333	190.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1426895_13	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1426895_13	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1426895_13	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1426895_13	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1426895_14	K01447	65.7	9e-19	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1426895_14	phrog_20388	429.9	0	endolysin	lysis
UniRef90	UHGV-1426895_14	UniRef90_A0A1Q6JHF5	971.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1426895_14	1203606.HMPREF1526_00253	409.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1426895_14	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-1426895_14	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1426895_14	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1426895_14	PF18013,PF01510,PF18342,MF_04111,NF008758,NF041850,COG3023,COG3807	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_15	phrog_10091	112.6	2.5e-33	holin	lysis
UniRef90	UHGV-1426895_15	UniRef90_D7GNX3	169.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1426895_15	428127.EUBDOL_01206	128.0	1.33e-37	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1426895_15	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1426895_15	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1426895_15	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426895_15	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1426895_16	K03749	67.6	2.2e-19	dedD; DedD protein	N/A
PHROG	UHGV-1426895_16	phrog_20388	390.5	0	endolysin	lysis
UniRef90	UHGV-1426895_16	UniRef90_A0A1C5N059	921.0	0	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1426895_16	665956.HMPREF1032_00684	402.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1426895_16	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-1426895_16	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1426895_16	PF05036	N/A	N/A	SPOR domain	SPOR
Pfam	UHGV-1426895_16	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1426895_16	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1426895_16	PF08230,PF01832,PF10030,NF038016,TIGR02594,COG1705,COG4322	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_17	phrog_1863	54.9	8.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-1426895_17	1232452.BAIB02000007_gene1606	58.9	0.00000000116	N/A	N/A
PHROG	UHGV-1426895_18	phrog_1382	59.9	2.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1426895_18	665950.HMPREF1025_01332	63.9	0.000000000000438	N/A	N/A
NCBIFam	UHGV-1426895_18	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-1426895_19	phrog_1382	48.8	0.00000000000007	N/A	unknown function
NCBIFam	UHGV-1426895_19	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1426895_19	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426895_20	742740.HMPREF9474_02256	62.8	0.0000000000247	N/A	N/A
structural_annotation	UHGV-1426895_20	PF07238	N/A	N/A	N/A	N/A
KOfam	UHGV-1426895_21	K00986	98.0	8.9e-29	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1426895_21	phrog_1423	165.4	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426895_21	UniRef90_A0A1C5MZK8	807.0	0	Retron-type reverse transcriptase	N/A
eggNOG-mapper	UHGV-1426895_21	742740.HMPREF9474_02253	352.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-1426895_21	icity0040	50.9	3.7e-18	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1426895_21	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1426895_21	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1426895_21	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426895_22	97139.C824_00240	125.0	4.75e-34	N/A	N/A
structural_annotation	UHGV-1426895_22	PF05635,NF008912	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426895_23	UniRef90_A0A1C5MZC0	568.0	0	N/A	N/A
eggNOG-mapper	UHGV-1426895_23	1235802.C823_01049	305.0	0	N/A	N/A
Pfam	UHGV-1426895_23	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-1426895_24	phrog_25620	47.4	0.00000000000016	tail collar fiber protein	tail
eggNOG-mapper	UHGV-1426895_24	365659.smi_0469	55.1	0.00000314	N/A	N/A
PHROG	UHGV-1426895_25	phrog_18725	65.8	7.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1426895_25	585501.HMPREF6123_0822	102.0	4.88e-26	N/A	N/A
PHROG	UHGV-1426895_26	phrog_13879	288.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1426895_26	1235800.C819_00474	491.0	0	N/A	N/A
structural_annotation	UHGV-1426895_26	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_27	phrog_1194	89.7	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1426895_27	742740.HMPREF9474_03515	120.0	1.49e-33	N/A	N/A
Pfam	UHGV-1426895_27	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1426895_27	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_28	phrog_1535	162.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1426895_28	UniRef90_A0A1C6L0H4	1360.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1426895_28	1121866.AUGK01000003_gene1437	293.0	0	phage tail tape measure protein	N/A
COG	UHGV-1426895_28	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1426895_29	1121333.JMLH01000047_gene1011	91.3	1.56e-21	N/A	N/A
UniRef90	UHGV-1426895_30	UniRef90_A0A1C0ADY7	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-1426895_30	1211844.CBLM010000023_gene988	92.8	4.6e-23	N/A	N/A
Pfam	UHGV-1426895_30	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1426895_30	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_31	phrog_158	60.6	3.2e-17	major tail protein	tail
UniRef90	UHGV-1426895_31	UniRef90_D7GNW1	279.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1426895_31	1232453.BAIF02000058_gene1634	106.0	1.59e-27	N/A	N/A
structural_annotation	UHGV-1426895_31	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_32	phrog_78	41.1	0.000000000024	tail terminator	connector
eggNOG-mapper	UHGV-1426895_32	1121333.JMLH01000047_gene1014	56.6	0.0000000313	N/A	N/A
structural_annotation	UHGV-1426895_32	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426895_33	UniRef90_UPI001BBD4500	65.1	0.000000000499	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1426895_33	1298920.KI911353_gene2654	61.6	0.00000000202	N/A	N/A
eggNOG-mapper	UHGV-1426895_34	1121866.AUGK01000003_gene1432	87.0	4.61e-20	N/A	N/A
UniRef90	UHGV-1426895_35	UniRef90_D7GNV9	208.0	0	Phage QLRG family, putative DNA packaging	N/A
eggNOG-mapper	UHGV-1426895_35	1298920.KI911353_gene2658	55.8	0.0000000117	N/A	N/A
Pfam	UHGV-1426895_35	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1426895_35	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_36	phrog_544	81.0	1.2e-23	major head protein	head and packaging
UniRef90	UHGV-1426895_36	UniRef90_A0A6N3FT63	148.0	2.92e-39	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-1426895_36	428127.EUBDOL_01555	265.0	0	N/A	N/A
structural_annotation	UHGV-1426895_36	PF06673,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_38	phrog_64	242.4	0	portal protein	head and packaging
UniRef90	UHGV-1426895_38	UniRef90_A0A1C5MXM2	904.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1426895_38	1121866.AUGK01000003_gene1429	424.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1426895_38	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1426895_38	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1426895_39	phrog_38	205.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1426895_39	UniRef90_A0A810QA10	552.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1426895_39	1298920.KI911353_gene2682	501.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1426895_39	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1426895_39	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426895_39	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426895_40	UniRef90_D7GNV5	251.0	0	N/A	N/A
Pfam	UHGV-1426895_40	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-1426895_40	PF16729,MF_00791,COG3353	N/A	N/A	N/A	N/A
KOfam	UHGV-1426895_41	K06400	186.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1426895_41	phrog_95	173.8	0	integrase	integration and excision
UniRef90	UHGV-1426895_41	UniRef90_A0A1C5MXG4	515.0	0	Transposon Tn3 resolvase	N/A
eggNOG-mapper	UHGV-1426895_41	697329.Rumal_3466	311.0	0	resolvase	N/A
Pfam	UHGV-1426895_41	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1426895_41	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1426895_41	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1426895_41	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1426895	Yes	33,109	51	74	1
UHGV-1749374	No	10,678	51	24	1
UHGV-1753452	No	10,649	51	24	1