vOTU vOTU-034880

vOTU: vOTU-034880

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034880
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00116 → vGENUS-00624 → vOTU-034880
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1428001
Biosample ID	SAMEA2738029
Genome length (bp)	21,641 bps
CheckV completeness	65.30% (Medium-quality)
CDS count	27
CDS density	90.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	83	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	9	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 65.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1428001_1	phrog_1529	93.8	2.6e-27	N/A	unknown function
UniRef90	UHGV-1428001_1	UniRef90_A0A1X0WPY5	114.0	4.04e-32	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1428001_1	888049.HMPREF8578_0245	113.0	9.64e-33	N/A	N/A
structural_annotation	UHGV-1428001_1	PF01381,NF040507,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1428001_2	UniRef90_A0A8B4HWB8	192.0	0	Putative phage-associated protein	N/A
structural_annotation	UHGV-1428001_2	PF13443,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_3	phrog_27778	66.3	3.7e-19	N/A	unknown function
PHROG	UHGV-1428001_4	phrog_20440	177.8	0	N/A	unknown function
UniRef90	UHGV-1428001_4	UniRef90_F5VXX3	143.0	9.55686e-43	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1428001_4	997830.HMPREF1124_0568	146.0	9.80909e-45	N/A	N/A
KOfam	UHGV-1428001_5	K01447	58.0	1.8e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1428001_5	phrog_1110	334.9	0	endolysin	lysis
UniRef90	UHGV-1428001_5	UniRef90_X8KD37	530.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1428001_5	936580.HMPREF1516_0702	530.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1428001_5	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1428001_5	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1428001_5	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_6	phrog_297	65.4	9.6e-19	holin	lysis
UniRef90	UHGV-1428001_6	UniRef90_E6KJ35	146.0	1.96182e-44	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1428001_6	1282664.H354_07765	151.0	0	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1428001_6	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1428001_6	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1428001_6	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1428001_6	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_7	phrog_1296	111.4	2.5e-33	holin	lysis
UniRef90	UHGV-1428001_7	UniRef90_A0A139NAW6	142.0	2.28972e-42	Phage holin	N/A
PHROG	UHGV-1428001_8	phrog_1554	251.5	0	N/A	unknown function
UniRef90	UHGV-1428001_8	UniRef90_A0A139Q9H9	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-1428001_8	1035189.HMPREF9954_1920	347.0	0	N/A	N/A
structural_annotation	UHGV-1428001_8	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_9	phrog_1137	100.3	8.4e-30	N/A	unknown function
UniRef90	UHGV-1428001_9	UniRef90_A0A1X0WPX7	112.0	3.79e-31	Dihydrodipicolinate reductase	N/A
eggNOG-mapper	UHGV-1428001_9	996306.SSUR61_0137	47.4	0.00000266	N/A	N/A
PHROG	UHGV-1428001_10	phrog_1210	637.6	0	PblB-type receptor binding	other
UniRef90	UHGV-1428001_10	UniRef90_A0A1X0WPV8	2015.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1428001_10	644007.C5J973_9CAUD	1588.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1428001_10	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1428001_10	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1428001_10	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_11	phrog_33	60.0	8e-18	distal tail protein Dit	tail
UniRef90	UHGV-1428001_11	UniRef90_A0A1F0TGE5	435.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1428001_11	888049.HMPREF8578_0707	454.0	0	N/A	N/A
structural_annotation	UHGV-1428001_11	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_12	phrog_5755	399.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1428001_12	UniRef90_X8K7L6	1362.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1428001_12	644007.C5J971_9CAUD	1237.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1428001_12	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1428001_12	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1428001_12	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_13	phrog_709	148.5	1.82169e-44	N/A	unknown function
UniRef90	UHGV-1428001_13	UniRef90_A0A0E4CSV4	181.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1428001_13	644007.C5J970_9CAUD	275.0	0	N/A	N/A
structural_annotation	UHGV-1428001_13	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_14	phrog_88	160.4	0	major tail protein	tail
UniRef90	UHGV-1428001_14	UniRef90_E6KKD9	385.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1428001_14	888049.HMPREF8578_0704	385.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1428001_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1428001_14	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_15	phrog_78	49.5	0.000000000000086	tail terminator	connector
UniRef90	UHGV-1428001_15	UniRef90_T0U477	152.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1428001_15	644007.C5J968_9CAUD	201.0	0	aminopeptidase activity	N/A
structural_annotation	UHGV-1428001_15	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_16	phrog_5	45.8	0.0000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-1428001_16	UniRef90_A0A098ANM6	203.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-1428001_16	644007.C5J967_9CAUD	195.0	0	exonuclease activity	N/A
Pfam	UHGV-1428001_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1428001_16	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_17	phrog_1951	137.2	3.50002e-41	head-tail adaptor	connector
UniRef90	UHGV-1428001_17	UniRef90_UPI000B58A5F0	181.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1428001_17	644007.C5J966_9CAUD	189.0	0	N/A	N/A
NCBIFam	UHGV-1428001_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1428001_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_18	phrog_2550	141.4	1.00053e-42	N/A	unknown function
UniRef90	UHGV-1428001_18	UniRef90_A0A081R3E6	185.0	0	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-1428001_18	888049.HMPREF8578_0700	186.0	0	N/A	N/A
structural_annotation	UHGV-1428001_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_19	phrog_390	92.7	2.6e-27	Arc-like repressor	transcription regulation
UniRef90	UHGV-1428001_19	UniRef90_A0A0P0N6K2	89.7	2.15e-21	Phage transcriptional terminator	N/A
eggNOG-mapper	UHGV-1428001_19	1405498.SSIM_04855	47.8	0.00000916	Rho termination factor, N-terminal domain	N/A
PHROG	UHGV-1428001_20	phrog_10	163.6	0	major head protein	head and packaging
UniRef90	UHGV-1428001_20	UniRef90_E6KKD3	658.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1428001_20	888049.HMPREF8578_0698	658.0	0	capsid protein	N/A
Pfam	UHGV-1428001_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1428001_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1428001_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1428001_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1428001_21	K06904	131.0	1.2e-38	N/A	N/A
PHROG	UHGV-1428001_21	phrog_80	161.2	0	head maturation protease	head and packaging
UniRef90	UHGV-1428001_21	UniRef90_E6KKD2	385.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1428001_21	888049.HMPREF8578_0697	385.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1428001_21	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1428001_21	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1428001_21	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1428001_21	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_22	phrog_12	190.9	0	portal protein	head and packaging
UniRef90	UHGV-1428001_22	UniRef90_UPI001CBC02E6	724.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1428001_22	888049.HMPREF8578_0696	788.0	0	Phage portal protein	N/A
Pfam	UHGV-1428001_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1428001_22	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1428001_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1428001_22	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_23	phrog_9	346.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1428001_23	UniRef90_A0A7G1IQ86	1097.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1428001_23	888049.HMPREF8578_0694	1145.0	0	Terminase	N/A
Pfam	UHGV-1428001_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1428001_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1428001_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1428001_23	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_24	phrog_361	154.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1428001_24	UniRef90_A0A414CIM9	226.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1428001_24	1005705.HMPREF9967_1038	250.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1428001_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1428001_24	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1428001_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_25	phrog_119	69.4	5.2e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1428001_25	UniRef90_A0A081R3F3	234.0	0	Prophage LambdaBa02, HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-1428001_25	644007.C5J957_9CAUD	226.0	0	endonuclease activity	N/A
KOfam	UHGV-1428001_26	K04763	102.7	4.7e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1428001_26	phrog_216	188.2	0	integrase	integration and excision
UniRef90	UHGV-1428001_26	UniRef90_A0A4D6B299	359.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1428001_26	644007.C5J955_9CAUD	361.0	0	Phage integrase family	N/A
Pfam	UHGV-1428001_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1428001_26	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1428001_27	phrog_36	77.7	1.8e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1428001_27	UniRef90_E6KKC4	256.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1428001_27	1123315.AUIP01000003_gene229	88.2	1.53e-20	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1428001_27	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1428001_27	PF05263,TIGR01636	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1428001	Yes	21,641	41	65	1
UHGV-1477924	No	17,183	41	52	1