vOTU vOTU-034919

vOTU: vOTU-034919

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034919
Number of genomes	4
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-00167 → vOTU-034919
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1430279
Biosample ID	N/A
Genome length (bp)	31,101 bps
CheckV completeness	54.30% (Medium-quality)
CDS count	60
CDS density	86.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	1976	Host agreement	87.7
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1430279_1	K07273	153.4	1.4013e-45	acm; lysozyme	N/A
PHROG	UHGV-1430279_1	phrog_291	144.9	6.89439e-43	endolysin	lysis
UniRef90	UHGV-1430279_1	UniRef90_A0A8D9UIP9	812.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1430279_1	411470.RUMGNA_00451	201.0	0	COG COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
Pfam	UHGV-1430279_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1430279_1	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1430279_1	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430279_2	1234679.BN424_1825	55.8	0.000000416	N/A	N/A
structural_annotation	UHGV-1430279_2	PF03843,MF_01959,TIGR00752,COG3065	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430279_3	PF03444,MF_00732,NF003025,COG1321	N/A	N/A	N/A	N/A
PHROG	UHGV-1430279_4	phrog_8	42.1	0.000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-1430279_4	UniRef90_R6ZMD8	98.6	3.99e-24	Toxin-antitoxin system antitoxin component Xre family	N/A
eggNOG-mapper	UHGV-1430279_4	665950.HMPREF1025_02562	90.9	4.98e-22	TRANSCRIPTIONal	N/A
COG	UHGV-1430279_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1430279_4	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430279_5	UniRef90_UPI000E4D6E81	92.8	1.94e-23	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1430279_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1430279_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1430279_5	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1430279_6	phrog_32192	70.4	2.1e-20	N/A	unknown function
UniRef90	UHGV-1430279_6	UniRef90_UPI001D0221FF	115.0	4.74e-31	alanine-zipper protein	N/A
KOfam	UHGV-1430279_10	K07741	113.4	4.5e-33	antB; anti-repressor protein	N/A
PHROG	UHGV-1430279_10	phrog_130	236.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1430279_10	UniRef90_A0A356C696	354.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1430279_10	1232452.BAIB02000007_gene1603	252.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1430279_10	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1430279_10	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1430279_10	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1430279_10	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430279_12	UniRef90_A0A8D9UIQ5	106.0	6.75e-28	Sporulation initiation factor	N/A
Pfam	UHGV-1430279_12	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-1430279_12	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
structural_annotation	UHGV-1430279_12	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-1430279_14	K03111	46.7	0.00000000000031	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1430279_14	phrog_26861	118.4	4.1e-35	N/A	unknown function
UniRef90	UHGV-1430279_14	UniRef90_A0A8D9PGK1	358.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-1430279_14	515620.EUBELI_01590	247.0	0	N/A	N/A
Pfam	UHGV-1430279_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1430279_14	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1430279_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1430279_14	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1430279_16	K19171	100.9	1.4e-29	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1430279_16	phrog_77	181.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430279_16	UniRef90_A0A8D9PGW5	897.0	0	Chromosome partition protein	N/A
eggNOG-mapper	UHGV-1430279_16	1298920.KI911353_gene2731	297.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1430279_16	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1430279_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1430279_16	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-1430279_18	K13884	66.6	3e-19	MARCO; macrophage receptor with collagenous structure	N/A
PHROG	UHGV-1430279_18	phrog_4433	125.9	1.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-1430279_18	886882.PPSC2_p0363	100.0	6.49e-21	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-1430279_18	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1430279_18	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1430279_18	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-1430279_19	phrog_561	173.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430279_19	UniRef90_UPI001F3F277E	187.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1430279_19	1415774.U728_869	182.0	0	N/A	N/A
Pfam	UHGV-1430279_19	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-1430279_19	NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1430279_20	K06940	55.7	0.0000000000000011	N/A	N/A
PHROG	UHGV-1430279_20	phrog_32498	170.6	0	N/A	unknown function
UniRef90	UHGV-1430279_20	UniRef90_A0A173SAY4	150.0	2.66247e-44	Flagellin N-methylase	N/A
eggNOG-mapper	UHGV-1430279_20	397290.C810_01479	149.0	7.00649e-45	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-1430279_20	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
PHROG	UHGV-1430279_21	phrog_25456	79.6	3.3e-23	N/A	unknown function
KOfam	UHGV-1430279_23	K06167	47.4	0.00000000000023	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1430279_23	phrog_392	183.9	0	metal-dependent hydrolase	other
UniRef90	UHGV-1430279_23	UniRef90_A0A412RQX2	364.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1430279_23	1443122.Z958_05735	163.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1430279_23	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-1430279_23	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1430279_23	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430279_25	1235790.C805_00035	68.2	0.000000000000546	N/A	N/A
PHROG	UHGV-1430279_27	phrog_8684	121.6	2.5e-36	N/A	unknown function
UniRef90	UHGV-1430279_27	UniRef90_A0A3D2KEV6	162.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1430279_27	411470.RUMGNA_02199	94.0	1.86e-22	N/A	N/A
Pfam	UHGV-1430279_27	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1430279_27	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1430279_27	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1430279_29	K03111	119.6	4.4e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1430279_29	phrog_44	127.1	1.4e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430279_29	UniRef90_A0A412RR48	264.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1430279_29	397290.C810_01495	187.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1430279_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1430279_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1430279_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1430279_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1430279_29	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1430279_30	phrog_19106	277.4	0	N/A	unknown function
UniRef90	UHGV-1430279_30	UniRef90_A0A412RQV5	308.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1430279_30	658655.HMPREF0988_00875	218.0	0	N/A	N/A
Pfam	UHGV-1430279_30	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-1430279_30	TIGR01453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430279_31	397290.C810_01505	144.0	8.96831e-44	N/A	N/A
KOfam	UHGV-1430279_35	K00571	111.2	1.3e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1430279_35	phrog_67	99.4	3.4e-29	DNA methyltransferase	other
UniRef90	UHGV-1430279_35	UniRef90_F7JKD7	494.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1430279_35	658655.HMPREF0988_00878	494.0	0	DNA methylase	N/A
PADLOC	UHGV-1430279_35	MTase_II_00157	87.6	1.3e-25	Type II methyltransferase	RM
Pfam	UHGV-1430279_35	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1430279_35	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1430279_35	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1430279_37	phrog_2514	83.9	1.8e-24	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430279_37	UniRef90_A0A174WT25	119.0	1.23e-28	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-1430279_37	1120998.AUFC01000013_gene2941	158.0	5.60519e-45	N/A	N/A
structural_annotation	UHGV-1430279_37	PF09681,MF_01177,TIGR01714,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1430279_38	phrog_9804	159.2	0	N/A	unknown function
UniRef90	UHGV-1430279_38	UniRef90_A0A292SPH8	380.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1430279_38	626523.GCWU000342_01038	132.0	1.21e-35	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1430279_38	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1430279_38	PF11417	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430279_41	UniRef90_A0A8D9PGK7	134.0	7.02e-40	Response regulator	N/A
structural_annotation	UHGV-1430279_41	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1430279_42	K14059	123.7	2.5e-36	int; integrase	N/A
PHROG	UHGV-1430279_42	phrog_1	117.0	2e-34	integrase	integration and excision
UniRef90	UHGV-1430279_42	UniRef90_A0A8D9PGQ3	771.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1430279_42	411461.DORFOR_02986	341.0	0	N/A	N/A
Pfam	UHGV-1430279_42	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1430279_42	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1430279_42	PF00589,PF02920,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430279_44	658655.HMPREF0988_00919	125.0	3.29e-34	N/A	N/A
structural_annotation	UHGV-1430279_44	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430279_45	658655.HMPREF0988_00918	77.8	5.02e-18	N/A	N/A
PHROG	UHGV-1430279_46	phrog_16490	183.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1430279_46	397290.C810_01328	183.0	0	N/A	N/A
PHROG	UHGV-1430279_48	phrog_20016	158.5	0	N/A	unknown function
UniRef90	UHGV-1430279_48	UniRef90_A0A2Z4QB67	136.0	1.23e-38	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1430279_48	1235790.C805_00062	172.0	0	N/A	N/A
structural_annotation	UHGV-1430279_48	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430279_49	658655.HMPREF0988_00915	127.0	1.31e-33	N/A	N/A
PHROG	UHGV-1430279_50	phrog_1233	59.4	7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1430279_50	397290.C810_01336	100.0	3.58e-26	N/A	N/A
Pfam	UHGV-1430279_50	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
PHROG	UHGV-1430279_53	phrog_3377	166.0	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430279_53	UniRef90_A0A0H3N242	113.0	1.3e-26	Phage-related protein	N/A
eggNOG-mapper	UHGV-1430279_53	397290.C810_01484	116.0	9.68e-29	N/A	N/A
AcrCatalog	UHGV-1430279_53	cluster_113756	39.3	0.0000209	NA	N/A
eggNOG-mapper	UHGV-1430279_55	1235800.C819_00521	53.9	0.00000016	N/A	N/A
structural_annotation	UHGV-1430279_55	PF09392,NF011854	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430279_58	UniRef90_UPI001D008199	129.0	1.29e-37	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1430279_58	877411.JMMA01000002_gene1483	53.1	0.0000000225	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1430279_58	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1430279_58	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1430279	Yes	31,101	36	54	1
UHGV-0123033	No	31,101	36	54	1
UHGV-1340236	No	30,757	36	54	1
UHGV-1819255	No	12,286	37	22	1