vOTU vOTU-034939

vOTU: vOTU-034939

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-034939
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-01604 → vGENUS-01655 → vOTU-034939
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488 → CAG-488 sp000434055
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0000544
Biosample ID	N/A
Genome length (bp)	38,088 bps
CheckV completeness	70.44% (Medium-quality)
CDS count	57
CDS density	96.44%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488	Total connections	51	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488 → CAG-488 sp000434055	Total connections	78	Host agreement	82.05

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0000544_1	K01448	65.6	7.4e-19	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0000544_1	phrog_435	77.9	1.8e-22	endolysin	lysis
UniRef90	UHGV-0000544_1	UniRef90_A0A810PUG7	217.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0000544_1	994573.T472_0202030	84.0	1.99e-16	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0000544_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0000544_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0000544_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0000544_1	PF01520,PF01471,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_2	phrog_263	70.2	2.1e-20	holin	lysis
UniRef90	UHGV-0000544_2	UniRef90_A0A355KVP4	157.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0000544_2	1158607.UAU_01779	58.5	0.000000000371	SPP1 phage holin	N/A
Pfam	UHGV-0000544_2	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0000544_2	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0000544_2	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_3	phrog_1863	83.2	1.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0000544_3	693746.OBV_18260	102.0	1.1e-27	N/A	N/A
PHROG	UHGV-0000544_8	phrog_1401	51.3	0.0000000000000078	N/A	unknown function
eggNOG-mapper	UHGV-0000544_8	1294142.CINTURNW_1705	55.5	0.0000000389	N/A	N/A
structural_annotation	UHGV-0000544_8	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_9	phrog_1330	56.9	7.7e-18	tail protein	tail
UniRef90	UHGV-0000544_9	UniRef90_R5YH87	1122.0	0	CBM-cenC domain-containing protein	N/A
eggNOG-mapper	UHGV-0000544_9	469596.HMPREF9488_01330	156.0	4.31e-36	N/A	N/A
Pfam	UHGV-0000544_9	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
PHROG	UHGV-0000544_10	phrog_1194	73.1	3.4e-21	N/A	unknown function
PHROG	UHGV-0000544_11	phrog_1535	132.9	6.6e-40	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0000544_11	1304866.K413DRAFT_3046	112.0	3.34e-22	N/A	N/A
COG	UHGV-0000544_11	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0000544_12	phrog_706	127.1	1.2e-37	N/A	unknown function
UniRef90	UHGV-0000544_12	UniRef90_A0A1H7MNA7	221.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0000544_12	411902.CLOBOL_00127	197.0	0	N/A	N/A
Pfam	UHGV-0000544_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0000544_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_13	phrog_11299	93.2	2.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0000544_13	1449050.JNLE01000003_gene3883	62.8	0.000000000346	N/A	N/A
PHROG	UHGV-0000544_14	phrog_3099	127.0	1.3e-37	N/A	unknown function
eggNOG-mapper	UHGV-0000544_14	33035.JPJF01000106_gene3126	194.0	0	N/A	N/A
structural_annotation	UHGV-0000544_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_15	phrog_3266	62.3	6.9e-18	tail completion	connector
eggNOG-mapper	UHGV-0000544_15	476272.RUMHYD_01781	149.0	9.52883e-44	N/A	N/A
structural_annotation	UHGV-0000544_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_16	phrog_556	64.6	9.1e-19	minor head protein	head and packaging
UniRef90	UHGV-0000544_16	UniRef90_UPI0006C7F62A	102.0	2.01e-25	minor capsid protein	N/A
eggNOG-mapper	UHGV-0000544_16	476272.RUMHYD_01780	155.0	0	N/A	N/A
Pfam	UHGV-0000544_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0000544_16	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_17	phrog_3366	63.6	3.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0000544_17	476272.RUMHYD_01779	63.5	0.000000000104	N/A	N/A
structural_annotation	UHGV-0000544_17	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_18	phrog_541	87.4	1.3e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0000544_18	476272.RUMHYD_01778	112.0	1.26e-29	N/A	N/A
UniRef90	UHGV-0000544_20	UniRef90_A0A0M2NI16	301.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-0000544_20	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_21	phrog_194	54.0	0.0000000000000034	head scaffolding protein	head and packaging
UniRef90	UHGV-0000544_21	UniRef90_A0A355KUP4	365.0	0	t-SNARE coiled-coil homology domain-containing protein	N/A
Pfam	UHGV-0000544_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0000544_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_22	phrog_355	42.5	0.0000000000095	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_22	UniRef90_A0A415UCX1	98.6	8.99e-25	N/A	N/A
eggNOG-mapper	UHGV-0000544_22	411461.DORFOR_01165	97.4	4.31e-25	N/A	N/A
structural_annotation	UHGV-0000544_22	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_24	phrog_581	261.8	0	minor head protein	head and packaging
UniRef90	UHGV-0000544_24	UniRef90_A0A3D4T830	783.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0000544_24	33035.JPJF01000106_gene3134	352.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0000544_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0000544_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000544_24	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_25	phrog_533	257.2	0	portal protein	head and packaging
UniRef90	UHGV-0000544_25	UniRef90_A0A1H7MQM5	506.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0000544_25	476272.RUMHYD_01758	415.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0000544_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0000544_26	K06909	79.6	4.2e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0000544_26	phrog_2	115.7	6.7e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0000544_26	UniRef90_A0A349DCJ8	908.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0000544_26	1032362.F6K8Q6_9CAUD	396.0	0	DNA packaging	N/A
Pfam	UHGV-0000544_26	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0000544_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
structural_annotation	UHGV-0000544_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_27	phrog_1889	198.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0000544_27	UniRef90_UPI001D11A7BB	106.0	5.64e-24	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0000544_27	457412.RSAG_04668	119.0	5.31e-30	N/A	N/A
Pfam	UHGV-0000544_27	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0000544_27	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0000544_27	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000544_27	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_28	phrog_1558	145.2	2.8026e-43	N/A	unknown function
UniRef90	UHGV-0000544_28	UniRef90_A0A2N5P3K0	107.0	2.91e-25	HTH_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000544_28	665956.HMPREF1032_03078	117.0	5.76e-30	N/A	N/A
PHROG	UHGV-0000544_32	phrog_8684	92.2	4.4e-28	N/A	unknown function
UniRef90	UHGV-0000544_32	UniRef90_A0A355KXQ4	169.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0000544_32	1450694.BTS2_0501	85.5	8.53e-20	YopX protein	N/A
Pfam	UHGV-0000544_32	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0000544_32	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0000544_32	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0000544_36	UniRef90_R6RDV7	51.6	0.00000146	DNA polymerase II large subunit	N/A
PHROG	UHGV-0000544_37	phrog_1384	126.0	2.5e-37	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0000544_37	665956.HMPREF1032_03086	246.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0000544_37	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
KOfam	UHGV-0000544_40	K01520	141.8	5.4006e-42	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0000544_40	phrog_135	126.1	2.1e-37	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_40	UniRef90_R5YVN2	276.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-0000544_40	887929.HMP0721_1278	165.0	0	dUTPase	N/A
Pfam	UHGV-0000544_40	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0000544_40	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0000544_40	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0000544_40	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_41	phrog_190	126.3	2.2e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_41	UniRef90_A0A830TZW4	108.0	1.56e-28	N/A	N/A
eggNOG-mapper	UHGV-0000544_41	1111134.HMPREF1253_1197	92.8	5.47e-23	N/A	N/A
Pfam	UHGV-0000544_41	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0000544_41	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_42	phrog_4973	69.8	3.6e-20	N/A	unknown function
UniRef90	UHGV-0000544_42	UniRef90_R5Y7B1	153.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0000544_42	339671.Asuc_1218	53.1	0.0000000403	Helix-turn-helix domain	N/A
Pfam	UHGV-0000544_42	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0000544_42	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
KOfam	UHGV-0000544_45	K03111	126.1	4.7e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0000544_45	phrog_44	129.1	3.5e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_45	UniRef90_A0A355KXP4	271.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0000544_45	1235835.C814_01372	109.0	1.26e-28	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0000544_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0000544_45	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0000544_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0000544_45	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0000544_45	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0000544_46	K02338	139.8	2.70002e-41	dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]	N/A
PHROG	UHGV-0000544_46	phrog_947	125.5	4.1e-37	DNA polymerase processivity factor	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_46	UniRef90_A0A349DE48	635.0	0	Beta sliding clamp	N/A
eggNOG-mapper	UHGV-0000544_46	1235793.C809_02201	114.0	4.75e-26	DNA polymerase III beta subunit	N/A
Pfam	UHGV-0000544_46	PF02768	N/A	N/A	DNA polymerase III beta subunit, C-terminal domain	DNA_pol3_beta_3
COG	UHGV-0000544_46	COG0592	N/A	N/A	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	N/A
structural_annotation	UHGV-0000544_46	PF02768,PF02767,MF_04161,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_47	phrog_3253	65.6	3.4e-19	N/A	unknown function
UniRef90	UHGV-0000544_47	UniRef90_A0A355KVS1	116.0	3.42e-33	Resolvase	N/A
eggNOG-mapper	UHGV-0000544_47	272563.CD630_29420	59.3	0.0000000000314	N/A	N/A
PHROG	UHGV-0000544_48	phrog_8470	281.8	0	N/A	unknown function
UniRef90	UHGV-0000544_48	UniRef90_A0A7G8TD95	341.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0000544_48	1235792.C808_03081	103.0	5.7e-20	PcfJ-like protein	N/A
Pfam	UHGV-0000544_48	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0000544_48	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_49	phrog_38338	172.7	0	N/A	unknown function
UniRef90	UHGV-0000544_49	UniRef90_UPI00137B3A8C	100.0	5.7e-24	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0000544_49	665956.HMPREF1032_03098	88.2	2.15e-19	N/A	N/A
Pfam	UHGV-0000544_49	PF14058	N/A	N/A	PcfK-like protein	PcfK
KOfam	UHGV-0000544_52	K07319	58.0	1.2e-16	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0000544_52	phrog_67	70.8	2.1e-20	DNA methyltransferase	other
UniRef90	UHGV-0000544_52	UniRef90_A0A2G6I066	357.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0000544_52	1298920.KI911353_gene2709	417.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0000544_52	MTase_II_00085	46.3	0.00000000000068	Type II methyltransferase	RM
Pfam	UHGV-0000544_52	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0000544_52	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0000544_52	PF01555,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0000544_53	K14440	43.8	0.0000000000000052	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0000544_53	phrog_16	232.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_53	UniRef90_R6E553	1064.0	0	DNA methylase family protein	N/A
eggNOG-mapper	UHGV-0000544_53	1123489.AUAN01000010_gene370	752.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0000544_53	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
COG	UHGV-0000544_53	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0000544_53	PF04851,PF16203,MF_01821,NF003426,COG0553	N/A	N/A	N/A	N/A
KOfam	UHGV-0000544_54	K02315	179.1	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0000544_54	phrog_50	169.1	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_54	UniRef90_A0A355KVR8	473.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0000544_54	1473546.CH76_01850	115.0	5.07e-28	IstB-like ATP binding protein	N/A
Pfam	UHGV-0000544_54	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0000544_54	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0000544_54	PF01695,MF_01158,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_55	phrog_20437	250.4	0	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000544_55	UniRef90_A0A355KVK1	567.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000544_55	428125.CLOLEP_01821	191.0	0	N/A	N/A
Pfam	UHGV-0000544_55	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0000544_55	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0000544_55	PF14297,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_56	phrog_398	202.5	0	N/A	unknown function
UniRef90	UHGV-0000544_56	UniRef90_UPI001E4CD732	207.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0000544_56	1485543.JMME01000021_gene802	177.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0000544_56	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0000544_56	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0000544_57	phrog_392	72.5	8e-21	metal-dependent hydrolase	other
UniRef90	UHGV-0000544_57	UniRef90_A0A355KXN6	300.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0000544_57	665956.HMPREF1032_03101	127.0	6.36e-35	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
COG	UHGV-0000544_57	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0000544	Yes	38,088	43	70	1
UHGV-0004029	No	36,002	42	67	1