vOTU vOTU-035027

vOTU: vOTU-035027

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035027
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00117 → vGENUS-19498 → vOTU-035027
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1437254
Biosample ID	SAMN00083581
Genome length (bp)	20,211 bps
CheckV completeness	53.24% (Medium-quality)
CDS count	24
CDS density	94.60%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	411	Host agreement	97.32
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira sp900316325	Total connections	39	Host agreement	92.31

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1437254_1	397290.C810_01505	140.0	4.26976e-42	N/A	N/A
PHROG	UHGV-1437254_2	phrog_36	59.0	8.3e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1437254_2	397290.C810_01391	111.0	2.02e-29	N/A	N/A
structural_annotation	UHGV-1437254_2	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-1437254_4	K07474	155.7	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1437254_4	phrog_51	156.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-1437254_4	UniRef90_A0A356C6K0	363.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1437254_4	1499683.CCFF01000014_gene3916	185.0	0	Terminase small subunit	N/A
Pfam	UHGV-1437254_4	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1437254_4	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1437254_4	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1437254_5	K06909	92.1	6.5e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1437254_5	phrog_2	73.5	3.7e-21	terminase large subunit	head and packaging
UniRef90	UHGV-1437254_5	UniRef90_A0A356C691	945.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1437254_5	1294142.CINTURNW_1023	510.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1437254_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1437254_5	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_6	phrog_533	280.6	0	portal protein	head and packaging
UniRef90	UHGV-1437254_6	UniRef90_A0A356C6G5	937.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1437254_6	33035.JPJF01000093_gene2257	579.0	0	N/A	N/A
structural_annotation	UHGV-1437254_6	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_7	phrog_581	249.3	0	minor head protein	head and packaging
UniRef90	UHGV-1437254_7	UniRef90_A0A413YU28	636.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1437254_7	33035.JPJF01000093_gene2255	438.0	0	N/A	N/A
Pfam	UHGV-1437254_7	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1437254_7	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1437254_7	PF06152,PF03496,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_10	phrog_872	167.4	0	N/A	unknown function
UniRef90	UHGV-1437254_10	UniRef90_A0A413P9Z7	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-1437254_10	573413.Spirs_2170	177.0	0	N/A	N/A
Pfam	UHGV-1437254_10	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1437254_10	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1437254_10	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_11	phrog_2303	129.9	1.7e-38	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1437254_11	483218.BACPEC_01156	150.0	1.11964e-42	N/A	N/A
PHROG	UHGV-1437254_12	phrog_422	357.4	0	major head protein	head and packaging
UniRef90	UHGV-1437254_12	UniRef90_A0A356C4N2	599.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1437254_12	742740.HMPREF9474_03505	473.0	0	N/A	N/A
structural_annotation	UHGV-1437254_12	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_13	phrog_1378	73.0	2.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-1437254_13	1391647.AVSV01000003_gene1809	69.3	0.0000000000000359	N/A	N/A
PHROG	UHGV-1437254_14	phrog_541	63.5	3.2e-18	head-tail adaptor	connector
eggNOG-mapper	UHGV-1437254_14	742740.HMPREF9474_03507	148.0	1.4013e-44	N/A	N/A
PHROG	UHGV-1437254_15	phrog_8710	134.4	3.20001e-40	N/A	unknown function
eggNOG-mapper	UHGV-1437254_15	742740.HMPREF9474_03508	125.0	7.06e-36	N/A	N/A
structural_annotation	UHGV-1437254_15	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_16	phrog_556	60.4	2.4e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-1437254_16	742740.HMPREF9474_03509	140.0	3.55005e-41	N/A	N/A
PHROG	UHGV-1437254_17	phrog_2595	90.4	1.5e-26	head-tail connector protein	connector
UniRef90	UHGV-1437254_17	UniRef90_UPI001D068DAC	143.0	1.93001e-41	minor capsid protein	N/A
eggNOG-mapper	UHGV-1437254_17	742740.HMPREF9474_03510	130.0	2.35e-37	N/A	N/A
Pfam	UHGV-1437254_17	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1437254_17	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_18	phrog_820	108.5	4.1e-32	major tail protein	tail
UniRef90	UHGV-1437254_18	UniRef90_T3DDR1	186.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1437254_18	1151292.QEW_2426	186.0	0	N/A	N/A
structural_annotation	UHGV-1437254_18	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_19	phrog_8300	64.7	1.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1437254_19	1151292.QEW_2425	60.1	0.000000000308	N/A	N/A
structural_annotation	UHGV-1437254_19	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_20	phrog_8355	88.3	3.5e-26	N/A	unknown function
UniRef90	UHGV-1437254_20	UniRef90_UPI0006BBA9AA	107.0	2.03e-28	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1437254_20	1151292.QEW_2424	101.0	1.7e-27	N/A	N/A
PHROG	UHGV-1437254_21	phrog_1535	275.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1437254_21	UniRef90_A0A1C5PIN9	495.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1437254_21	33035.JPJF01000093_gene2243	377.0	0	phage tail tape measure protein	N/A
COG	UHGV-1437254_21	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1437254_21	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_22	phrog_1194	75.6	5.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1437254_22	33035.JPJF01000093_gene2242	160.0	0	N/A	N/A
structural_annotation	UHGV-1437254_22	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_23	phrog_1401	59.0	7.3e-17	N/A	unknown function
UniRef90	UHGV-1437254_23	UniRef90_UPI00077668B1	66.6	0.0000000000171	N/A	N/A
eggNOG-mapper	UHGV-1437254_23	1391647.AVSV01000003_gene1820	75.9	7.39e-16	N/A	N/A
structural_annotation	UHGV-1437254_23	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1437254_24	phrog_16267	147.0	0	N/A	unknown function
UniRef90	UHGV-1437254_24	UniRef90_A0A356C4L7	1660.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1437254_24	1294142.CINTURNW_1706	314.0	0	Phage minor structural protein	N/A
COG	UHGV-1437254_24	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1437254_24	PF06605,PF20086,PF18099,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1437254	Yes	20,211	38	53	1
UHGV-1816848	No	12,324	38	32	1