vOTU vOTU-035263

vOTU: vOTU-035263

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035263
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00239 → vGENUS-00650 → vOTU-035263
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1450217
Biosample ID	N/A
Genome length (bp)	24,929 bps
CheckV completeness	84.26% (Medium-quality)
CDS count	41
CDS density	92.27%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	637	Host agreement	72.37
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 84.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1450217_1	phrog_674	114.4	9.6e-34	N/A	unknown function
UniRef90	UHGV-1450217_1	UniRef90_A0A374N9T8	350.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450217_1	641112.ACOK01000103_gene524	181.0	0	N/A	N/A
Pfam	UHGV-1450217_1	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1450217_2	PF04570,COG2075	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450217_5	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_7	phrog_2232	217.4	0	N/A	unknown function
UniRef90	UHGV-1450217_7	UniRef90_UPI00164B82D7	467.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450217_7	748224.HMPREF9436_01448	167.0	0	N/A	N/A
Pfam	UHGV-1450217_7	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-1450217_7	PF14337,TIGR03899	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450217_9	97138.C820_00203	49.7	0.0000023	Transcriptional	N/A
COG	UHGV-1450217_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1450217_10	phrog_8	42.9	0.00000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-1450217_10	UniRef90_A0A413K864	251.0	0	XRE family transcriptional regulator	N/A
COG	UHGV-1450217_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1450217_10	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_11	phrog_87	61.8	8.5e-18	metallo-protease	other
UniRef90	UHGV-1450217_11	UniRef90_A0A1Y4S739	98.2	1.21e-23	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450217_11	1007096.BAGW01000011_gene2354	90.5	2.45e-21	IrrE N-terminal-like domain	N/A
COG	UHGV-1450217_11	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1450217_11	PF06114,COG2856	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450217_12	679192.HMPREF9013_1325	85.5	1.66e-16	N/A	N/A
PHROG	UHGV-1450217_13	phrog_10292	72.1	5.6e-21	N/A	unknown function
UniRef90	UHGV-1450217_13	UniRef90_A0A413K8M0	269.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450217_13	537013.CLOSTMETH_02269	101.0	6.73e-26	TM2 domain	N/A
Pfam	UHGV-1450217_13	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1450217_13	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1450217_14	K14059	152.1	7.00649e-45	int; integrase	N/A
PHROG	UHGV-1450217_14	phrog_1	164.3	0	integrase	integration and excision
UniRef90	UHGV-1450217_14	UniRef90_A0A412L7T7	690.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1450217_14	1540257.JQMW01000011_gene2033	322.0	0	Phage integrase family	N/A
Pfam	UHGV-1450217_14	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1450217_14	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1450217_14	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1450217_15	K00571	171.8	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1450217_15	phrog_67	141.6	2.66247e-44	DNA methyltransferase	other
UniRef90	UHGV-1450217_15	UniRef90_A0A412UM21	445.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1450217_15	1226322.HMPREF1545_02860	168.0	0	N/A	N/A
PADLOC	UHGV-1450217_15	MTase_II_00157	145.5	3.92364e-44	Type II methyltransferase	RM
Pfam	UHGV-1450217_15	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1450217_15	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1450217_15	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1450217_16	K01447	58.6	1.4e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1450217_16	phrog_20388	307.8	0	endolysin	lysis
UniRef90	UHGV-1450217_16	UniRef90_A0A374N1L8	554.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1450217_16	1203606.HMPREF1526_00253	318.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1450217_16	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1450217_16	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1450217_16	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1450217_16	PF01510,PF01476,PF15591,MF_02014,MF_04111,MF_01354,NF008758,NF010723,TIGR00405,COG3023,COG5004,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_17	phrog_918	113.9	5.5e-34	N/A	unknown function
UniRef90	UHGV-1450217_17	UniRef90_UPI00164AB9AF	122.0	1.79e-34	N/A	N/A
eggNOG-mapper	UHGV-1450217_17	1504823.CCMM01000008_gene1021	114.0	2.58e-32	N/A	N/A
Pfam	UHGV-1450217_17	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1450217_17	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_18	phrog_199	76.0	4.2e-22	holin	lysis
UniRef90	UHGV-1450217_18	UniRef90_A0A2N0ULW7	271.0	0	Holin	N/A
eggNOG-mapper	UHGV-1450217_18	1160721.RBI_I01565	143.0	8.72028e-42	Bacteriophage holin family	N/A
Pfam	UHGV-1450217_18	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1450217_18	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1450217_18	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1450217_18	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450217_20	UniRef90_A0A374N9Y2	320.0	0	N/A	N/A
Pfam	UHGV-1450217_20	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1450217_20	PF10651,PF08931,TIGR02268	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_21	phrog_1067	139.6	1.90002e-41	minor head protein	head and packaging
UniRef90	UHGV-1450217_21	UniRef90_A0A348ZBV6	177.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1450217_21	1160721.RBI_I01574	124.0	4.05e-28	Prophage endopeptidase tail	N/A
NCBIFam	UHGV-1450217_21	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1450217_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1450217_21	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450217_22	UniRef90_A0A1G5CPA2	122.0	2.54e-30	Phage-related protein	N/A
eggNOG-mapper	UHGV-1450217_22	1246.JMEA01000006_gene51	69.7	0.000000000024	phage tail	N/A
COG	UHGV-1450217_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1450217_22	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_23	phrog_23464	255.8	0	N/A	unknown function
UniRef90	UHGV-1450217_23	UniRef90_A0A1C6JGQ9	183.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1450217_23	665950.HMPREF1025_02660	182.0	1.4013e-45	phage tail tape measure protein	N/A
COG	UHGV-1450217_23	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1450217_23	COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_25	phrog_1021	50.6	0.0000000000000015	N/A	unknown function
PHROG	UHGV-1450217_26	phrog_885	136.2	2e-40	major tail protein	tail
UniRef90	UHGV-1450217_26	UniRef90_A0A101Y2E4	160.0	4.2039e-45	Big_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450217_26	1321814.HMPREF9089_00935	175.0	0	N/A	N/A
structural_annotation	UHGV-1450217_26	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450217_27	PF12691	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450217_28	UniRef90_UPI001A9B6FBF	163.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1450217_28	1414720.CBYM010000040_gene1650	132.0	1.1e-37	N/A	N/A
structural_annotation	UHGV-1450217_28	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_29	phrog_1951	95.6	2.9e-28	head-tail adaptor	connector
UniRef90	UHGV-1450217_29	UniRef90_A0A374MZF9	186.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1450217_29	1414720.CBYM010000040_gene1649	65.1	0.00000000000282	head-tail adaptor	N/A
COG	UHGV-1450217_29	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1450217_29	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_30	phrog_5223	54.3	0.0000000000000017	neck protein	connector
eggNOG-mapper	UHGV-1450217_30	931626.Awo_c31020	48.1	0.00000581	N/A	N/A
NCBIFam	UHGV-1450217_30	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1450217_30	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_31	phrog_10	149.8	2.24208e-44	major head protein	head and packaging
UniRef90	UHGV-1450217_31	UniRef90_A0A374N9V9	726.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1450217_31	1280689.AUJC01000011_gene1521	329.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1450217_31	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1450217_31	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1450217_31	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1450217_31	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1450217_32	K01358	120.4	2.1e-35	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1450217_32	phrog_94	190.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1450217_32	UniRef90_A0A374NBM3	402.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1450217_32	1203606.HMPREF1526_00979	179.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1450217_32	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1450217_32	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1450217_32	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_33	phrog_12	179.7	0	portal protein	head and packaging
UniRef90	UHGV-1450217_33	UniRef90_A0A374NAE1	762.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1450217_33	626523.GCWU000342_01027	405.0	0	Portal protein	N/A
Pfam	UHGV-1450217_33	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1450217_33	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1450217_33	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_34	phrog_9	395.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1450217_34	UniRef90_A0A374NB45	979.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1450217_34	1235793.C809_01917	723.0	0	Phage Terminase	N/A
Pfam	UHGV-1450217_34	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1450217_34	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1450217_34	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1450217_34	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1450217_35	phrog_1066	115.7	2.3e-34	N/A	unknown function
UniRef90	UHGV-1450217_35	UniRef90_A0A0D0SQQ8	82.4	8.02e-18	N/A	N/A
eggNOG-mapper	UHGV-1450217_35	1203606.HMPREF1526_00982	104.0	1.89e-27	N/A	N/A
PHROG	UHGV-1450217_36	phrog_119	56.3	4.5e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450217_36	UniRef90_A0A374N9T6	238.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1450217_36	1235793.C809_01915	120.0	1.79e-33	HNH endonuclease	N/A
COG	UHGV-1450217_36	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1450217_37	PF02796,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1450217_40	K18830	51.9	0.000000000000018	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1450217_40	phrog_8	63.0	7e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1450217_40	UniRef90_A0A374N9T4	122.0	3.31e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1450217_40	717605.Theco_0106	77.0	3.65e-17	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1450217_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1450217_40	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1450217_40	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1450217	Yes	24,929	40	84	1
UHGV-1975209	No	24,007	40	82	1