vOTU vOTU-035383

vOTU: vOTU-035383

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035383
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00058 → vOTU-035383
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1457248
Biosample ID	SAMEA3541471
Genome length (bp)	43,975 bps
CheckV completeness	76.91% (Medium-quality)
CDS count	80
CDS density	86.09%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor	Total connections	1115	Host agreement	82.06
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor → Acetatifactor sp900066565	Total connections	11	Host agreement	72.73

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 76.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1457248_2	476272.RUMHYD_01968	185.0	0	N/A	N/A
structural_annotation	UHGV-1457248_2	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_3	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457248_4	UniRef90_UPI001BBD4500	145.0	4.47e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1457248_4	397290.C810_01411	205.0	0	N/A	N/A
structural_annotation	UHGV-1457248_4	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_5	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_6	phrog_1129	74.2	1.1e-21	holin	lysis
UniRef90	UHGV-1457248_6	UniRef90_A0A8D9UII9	137.0	2.28e-40	Holin	N/A
eggNOG-mapper	UHGV-1457248_6	411461.DORFOR_00721	103.0	4.63e-28	N/A	N/A
Pfam	UHGV-1457248_6	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1457248_6	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_7	phrog_4105	92.7	2.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-1457248_7	411459.RUMOBE_00911	158.0	0	N/A	N/A
eggNOG-mapper	UHGV-1457248_8	397290.C810_01402	63.2	0.0000000000291	N/A	N/A
PHROG	UHGV-1457248_9	phrog_29	172.0	0	major head protein	head and packaging
UniRef90	UHGV-1457248_9	UniRef90_A0A2S6HJ16	398.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-1457248_9	1232443.BAIA02000078_gene29	320.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1457248_9	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
Pfam	UHGV-1457248_9	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1457248_9	PF03864,PF18316,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_10	phrog_909	65.6	6.8e-19	major head protein	head and packaging
eggNOG-mapper	UHGV-1457248_10	1497679.EP56_02915	66.6	0.00000000000074	N/A	N/A
structural_annotation	UHGV-1457248_10	PF02924	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457248_11	UniRef90_R6C0B6	201.0	0	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1457248_12	phrog_64	181.0	0	portal protein	head and packaging
UniRef90	UHGV-1457248_12	UniRef90_UPI001D0761B7	944.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1457248_12	1298920.KI911353_gene2663	473.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1457248_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1457248_12	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_13	phrog_36	76.5	4e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1457248_13	UniRef90_A0A352SH29	174.0	0	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1457248_13	411459.RUMOBE_01043	94.4	1.14e-22	N/A	N/A
structural_annotation	UHGV-1457248_13	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_14	phrog_38	138.9	3.59994e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1457248_14	UniRef90_A0A352SH30	1155.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1457248_14	397290.C810_01390	669.0	0	chromosome segregation	N/A
Pfam	UHGV-1457248_14	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1457248_14	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_14	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457248_15	UniRef90_UPI001D08650D	179.0	0	Com family DNA-binding transcriptional regulator	N/A
Pfam	UHGV-1457248_15	PF10122	N/A	N/A	N/A	Mu-like_Com
structural_annotation	UHGV-1457248_15	PF10122,COG4416	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_18	PF04466	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_21	PF20556	N/A	N/A	N/A	N/A
KOfam	UHGV-1457248_24	K07451	46.6	0.00000000000059	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1457248_24	phrog_589	46.4	0.00000000000048	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457248_24	UniRef90_UPI001D1201FC	103.0	4.32e-24	HNH endonuclease	N/A
Pfam	UHGV-1457248_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1457248_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1457248_24	PF14279	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_25	PF16677	N/A	N/A	N/A	N/A
Pfam	UHGV-1457248_27	PF05534	N/A	N/A	HicB family	HicB
structural_annotation	UHGV-1457248_27	PF03869,NF041793	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_28	phrog_31631	41.2	0.00000000002	N/A	unknown function
structural_annotation	UHGV-1457248_30	PF13973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1457248_31	411902.CLOBOL_05754	47.0	0.000000676	N/A	N/A
structural_annotation	UHGV-1457248_31	PF02151	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_33	phrog_806	63.1	6.4e-18	N/A	unknown function
UniRef90	UHGV-1457248_33	UniRef90_UPI001D08E833	530.0	0	N/A	N/A
eggNOG-mapper	UHGV-1457248_33	697329.Rumal_0454	118.0	2.62e-29	N/A	N/A
Pfam	UHGV-1457248_33	PF11611	N/A	N/A	N/A	DUF4352
PHROG	UHGV-1457248_34	phrog_130	145.3	4.59626e-43	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1457248_34	UniRef90_A0A1V0QCE9	205.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1457248_34	1235802.C823_04881	160.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1457248_34	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1457248_34	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1457248_34	PF02498,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-1457248_35	K07487	315.9	0	K07487; transposase	N/A
PHROG	UHGV-1457248_35	phrog_8928	524.9	0	N/A	unknown function
UniRef90	UHGV-1457248_35	UniRef90_A0A3C1J3Q5	953.0	0	IS1182 family transposase	N/A
eggNOG-mapper	UHGV-1457248_35	1235800.C819_01638	772.0	0	N/A	N/A
Pfam	UHGV-1457248_35	PF05598	N/A	N/A	N/A	DUF772
Pfam	UHGV-1457248_35	PF13751	N/A	N/A	Transposase DDE domain	DDE_Tnp_1_6
NCBIFam	UHGV-1457248_35	NF033551.1	N/A	N/A	IS1182 family transposase	N/A
COG	UHGV-1457248_35	COG3039	N/A	N/A	Transposase and inactivated derivatives, IS5 family	N/A
structural_annotation	UHGV-1457248_35	PF01609,PF05598,NF033551,COG5421	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_36	phrog_4608	128.8	4.7e-38	anti-repressor	transcription regulation
UniRef90	UHGV-1457248_36	UniRef90_UPI001D05F100	333.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-1457248_36	658655.HMPREF0988_00907	189.0	0	ORF6N domain	N/A
Pfam	UHGV-1457248_36	PF10543	N/A	N/A	ORF6N domain	ORF6N
structural_annotation	UHGV-1457248_36	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_37	phrog_1233	55.2	0.0000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1457248_37	397290.C810_01336	99.8	7.21e-26	N/A	N/A
eggNOG-mapper	UHGV-1457248_38	658655.HMPREF0988_00915	130.0	7.37e-35	N/A	N/A
PHROG	UHGV-1457248_39	phrog_20016	234.7	0	N/A	unknown function
UniRef90	UHGV-1457248_39	UniRef90_A0A285PT46	174.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1457248_39	397290.C810_05214	231.0	0	N/A	N/A
structural_annotation	UHGV-1457248_39	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_40	phrog_16490	198.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1457248_40	397290.C810_01328	203.0	0	N/A	N/A
eggNOG-mapper	UHGV-1457248_41	658655.HMPREF0988_00918	52.0	0.0000000838	N/A	N/A
PHROG	UHGV-1457248_42	phrog_21718	42.4	0.000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1457248_42	397290.C810_01326	74.7	0.0000000000000124	N/A	N/A
KOfam	UHGV-1457248_45	K14059	122.5	5.4e-36	int; integrase	N/A
PHROG	UHGV-1457248_45	phrog_1	120.9	1.3e-35	integrase	integration and excision
UniRef90	UHGV-1457248_45	UniRef90_UPI001D00AE51	489.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1457248_45	97139.C824_00125	445.0	0	Phage integrase family	N/A
Pfam	UHGV-1457248_45	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1457248_45	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1457248_45	PF00589,PF02920,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457248_46	UniRef90_A0A413Z5X3	79.3	5.89e-18	LuxR family transcriptional regulator	N/A
Pfam	UHGV-1457248_46	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-1457248_46	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457248_47	UniRef90_UPI00189796FC	67.0	0.000000000000385	zinc-ribbon domain-containing protein	N/A
structural_annotation	UHGV-1457248_47	PF13248	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457248_48	UniRef90_A0A3D5M0V6	76.3	2.68e-17	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-1457248_48	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1457248_50	K07392	87.9	9.2e-26	PRS2; AAA family ATPase	N/A
PHROG	UHGV-1457248_50	phrog_3757	188.6	0	N/A	unknown function
UniRef90	UHGV-1457248_50	UniRef90_A0A1Q6KIJ0	560.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1457248_50	1235802.C823_01035	332.0	0	ATPase family associated with various cellular activities (AAA)	N/A
PADLOC	UHGV-1457248_50	IetA_00002	154.5	1.4013e-45	NA	ietAS
Pfam	UHGV-1457248_50	PF00004	N/A	N/A	ATPase family associated with various cellular activities (AAA)	AAA
COG	UHGV-1457248_50	COG0464	N/A	N/A	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	N/A
structural_annotation	UHGV-1457248_50	PF00004,MF_00553,TIGR01242,COG1222	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_51	phrog_10867	58.9	7.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-1457248_51	411470.RUMGNA_00209	63.5	0.00000000000121	N/A	N/A
UniRef90	UHGV-1457248_54	UniRef90_A0A6L5YG44	693.0	0	N/A	N/A
eggNOG-mapper	UHGV-1457248_54	1235800.C819_00236	509.0	0	N/A	N/A
Pfam	UHGV-1457248_54	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-1457248_54	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
KOfam	UHGV-1457248_55	K00558	227.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1457248_55	phrog_116	267.2	0	DNA methyltransferase	other
UniRef90	UHGV-1457248_55	UniRef90_A0A1C5S2H5	900.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1457248_55	1235800.C819_02255	653.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1457248_55	MTase_II_00020	114.5	8.8e-38	Type II methyltransferase	RM
Pfam	UHGV-1457248_55	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1457248_55	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1457248_55	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
COG	UHGV-1457248_56	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-1457248_57	phrog_424	56.6	3.3e-16	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1457248_57	UniRef90_A0A412RQR2	288.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1457248_57	1345695.CLSA_c30150	108.0	3.06e-25	N/A	N/A
COG	UHGV-1457248_57	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1457248_57	PF01507,MF_00064,TIGR02055,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1457248_58	K00953	40.9	0.000000000019	FLAD1; FAD synthetase [EC:2.7.7.2]	N/A
PHROG	UHGV-1457248_58	phrog_424	50.8	0.000000000000021	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1457248_58	UniRef90_A0A412RQP5	191.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1457248_58	537013.CLOSTMETH_01340	132.0	3.8e-35	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1457248_58	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1457248_58	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1457248_58	PF01507,NF002537,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_60	phrog_874	172.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1457248_60	411468.CLOSCI_00298	179.0	0	N/A	N/A
structural_annotation	UHGV-1457248_60	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_62	phrog_599	53.9	0.0000000000000042	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1457248_62	UniRef90_A0A412KFB8	167.0	0	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-1457248_62	1235790.C805_00069	85.9	4.14e-21	Restriction alleviation protein Lar	N/A
Pfam	UHGV-1457248_62	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1457248_62	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1457248_62	PF14354,TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457248_63	UniRef90_R5GX78	52.0	0.00000215	DNA polymerase II large subunit	N/A
eggNOG-mapper	UHGV-1457248_63	397290.C810_01514	68.2	0.000000000000253	N/A	N/A
PHROG	UHGV-1457248_70	phrog_8489	199.9	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457248_70	UniRef90_A0A352SFU9	209.0	0	DNA replication protein (Fragment)	N/A
eggNOG-mapper	UHGV-1457248_70	1415774.U728_867	156.0	4.2039e-45	DnaD domain protein	N/A
COG	UHGV-1457248_70	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1457248_70	TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_73	phrog_19106	322.3	0	N/A	unknown function
UniRef90	UHGV-1457248_73	UniRef90_UPI001D086F0C	422.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1457248_73	658655.HMPREF0988_00875	250.0	0	N/A	N/A
structural_annotation	UHGV-1457248_73	TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-1457248_74	K06167	47.4	0.00000000000019	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1457248_74	phrog_392	175.9	0	metal-dependent hydrolase	other
UniRef90	UHGV-1457248_74	UniRef90_A0A352SIH6	415.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1457248_74	1443122.Z958_05735	163.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1457248_74	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
dbAPIS	UHGV-1457248_74	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-1457248_74	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1457248_74	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_76	phrog_2185	337.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457248_76	UniRef90_UPI00157154DF	511.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1457248_76	1232453.BAIF02000057_gene1136	473.0	0	N/A	N/A
structural_annotation	UHGV-1457248_76	NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_77	PF13973,PF04319,PF08962	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457248_78	PF02237,MF_00257,NF037951,COG4013	N/A	N/A	N/A	N/A
PHROG	UHGV-1457248_80	phrog_21084	51.4	0.000000000000014	recombinase	other
eggNOG-mapper	UHGV-1457248_80	397290.C810_01461	120.0	1.88e-30	nuclear chromosome segregation	N/A
COG	UHGV-1457248_80	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1457248	Yes	43,975	41	77	1
UHGV-0098329	No	34,457	41	60	1