vOTU vOTU-035519

vOTU: vOTU-035519

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035519
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-06285 → vOTU-035519
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp015667795
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1465336
Biosample ID	N/A
Genome length (bp)	24,041 bps
CheckV completeness	61.73% (Medium-quality)
CDS count	38
CDS density	93.78%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp015667795	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1465336_1	545697.HMPREF0216_02867	192.0	0	domain, Protein	N/A
COG	UHGV-1465336_1	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
eggNOG-mapper	UHGV-1465336_2	545697.HMPREF0216_02866	79.0	6.86e-19	N/A	N/A
eggNOG-mapper	UHGV-1465336_3	545697.HMPREF0216_02865	59.3	0.00000000203	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1465336_3	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-1465336_4	phrog_538	262.2	0	minor tail protein	tail
UniRef90	UHGV-1465336_4	UniRef90_UPI0018AA761D	765.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1465336_4	1280692.AUJL01000004_gene832	380.0	0	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1465336_4	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
COG	UHGV-1465336_4	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-1465336_4	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_5	phrog_9534	115.4	6.1e-34	head protein	head and packaging
UniRef90	UHGV-1465336_5	UniRef90_A0A0U2WUF0	145.0	3.64e-40	Phage-related protein	N/A
eggNOG-mapper	UHGV-1465336_5	545697.HMPREF0216_02863	316.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1465336_5	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_6	phrog_33	95.2	1.2e-27	distal tail protein Dit	tail
UniRef90	UHGV-1465336_6	UniRef90_UPI0018A96BFD	558.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1465336_6	545697.HMPREF0216_02862	256.0	0	Phage tail protein	N/A
Pfam	UHGV-1465336_6	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1465336_6	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1465336_6	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_7	phrog_991	78.8	7.5e-28	tail length tape measure protein	tail
UniRef90	UHGV-1465336_7	UniRef90_A0A6A7KA30	112.0	2.99e-22	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1465336_7	365048.Q0H230_9CAUD	121.0	1.31e-25	N-acetylmuramoyl-L-alanine amidase activity	N/A
eggNOG-mapper	UHGV-1465336_8	457396.CSBG_01056	93.6	2.85e-23	N/A	N/A
eggNOG-mapper	UHGV-1465336_9	457396.CSBG_01055	108.0	1.83e-29	N/A	N/A
PHROG	UHGV-1465336_10	phrog_885	182.5	0	major tail protein	tail
UniRef90	UHGV-1465336_10	UniRef90_UPI000BE41A82	263.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1465336_10	457396.CSBG_01054	263.0	0	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-1465336_10	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-1465336_10	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_11	phrog_957	54.6	0.0000000000000014	head protein	head and packaging
UniRef90	UHGV-1465336_11	UniRef90_A0A6B0DYC1	134.0	3.02e-38	N/A	N/A
eggNOG-mapper	UHGV-1465336_11	457396.CSBG_01053	125.0	1.25e-35	N/A	N/A
structural_annotation	UHGV-1465336_11	PF11367,COG4722	N/A	N/A	N/A	N/A
UniRef90	UHGV-1465336_12	UniRef90_A0A133N6J9	220.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1465336_12	1414720.CBYM010000040_gene1650	230.0	0	N/A	N/A
structural_annotation	UHGV-1465336_12	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_13	phrog_1951	87.2	1.2e-25	head-tail adaptor	connector
UniRef90	UHGV-1465336_13	UniRef90_A0A4R3N8W9	93.2	1.32e-22	SPP1 family predicted phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-1465336_13	457396.CSBG_01051	104.0	9.48e-28	head-tail adaptor	N/A
Pfam	UHGV-1465336_13	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1465336_13	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1465336_13	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1465336_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1465336_14	457396.CSBG_01050	100.0	7.07e-27	N/A	N/A
PHROG	UHGV-1465336_15	phrog_10	111.3	1e-32	major head protein	head and packaging
UniRef90	UHGV-1465336_15	UniRef90_A0A1C6JHX3	696.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-1465336_15	457396.CSBG_01049	591.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1465336_15	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1465336_15	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1465336_15	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1465336_15	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1465336_16	K06904	119.5	3.8e-35	N/A	N/A
PHROG	UHGV-1465336_16	phrog_80	133.1	2.8e-39	head maturation protease	head and packaging
UniRef90	UHGV-1465336_16	UniRef90_V9H369	369.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1465336_16	457396.CSBG_01048	369.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1465336_16	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1465336_16	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1465336_16	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1465336_16	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_17	phrog_12	159.9	0	portal protein	head and packaging
UniRef90	UHGV-1465336_17	UniRef90_V9HDD3	759.0	0	HK97 family phage portal protein	N/A
eggNOG-mapper	UHGV-1465336_17	457396.CSBG_01047	759.0	0	Portal protein	N/A
Pfam	UHGV-1465336_17	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1465336_17	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1465336_17	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_18	phrog_9	265.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1465336_18	UniRef90_A0A1C6JHP9	1026.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-1465336_18	457396.CSBG_01046	1055.0	0	Terminase	N/A
Pfam	UHGV-1465336_18	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1465336_18	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1465336_18	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1465336_18	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_19	phrog_1066	54.8	0.0000000000000017	N/A	unknown function
UniRef90	UHGV-1465336_19	UniRef90_A0A316MDS1	130.0	2.65e-37	Zinc-binding protein	N/A
eggNOG-mapper	UHGV-1465336_19	457396.CSBG_01045	132.0	1.09e-38	N/A	N/A
structural_annotation	UHGV-1465336_19	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_20	phrog_4581	130.0	1.2e-38	terminase small subunit	head and packaging
UniRef90	UHGV-1465336_20	UniRef90_V9H2B4	460.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1465336_20	457396.CSBG_01044	460.0	0	HNH endonuclease	N/A
Pfam	UHGV-1465336_20	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1465336_20	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1465336_20	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
KOfam	UHGV-1465336_21	K07474	123.5	3.1e-36	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1465336_21	phrog_2606	293.5	0	terminase small subunit	head and packaging
UniRef90	UHGV-1465336_21	UniRef90_UPI0018AA000D	380.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1465336_21	411490.ANACAC_00784	215.0	0	terminase, small subunit	N/A
Pfam	UHGV-1465336_21	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-1465336_21	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1465336_21	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1465336_21	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_22	phrog_36	50.5	0.00000000000005	transcriptional regulator	transcription regulation
UniRef90	UHGV-1465336_22	UniRef90_A0A1G9I4W9	103.0	1.12e-24	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-1465336_22	1196322.A370_01361	219.0	0	DNA-templated transcription, initiation	N/A
COG	UHGV-1465336_22	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-1465336_22	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_23	phrog_25509	99.0	2.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-1465336_23	1280689.AUJC01000003_gene942	139.0	1.27e-41	N/A	N/A
PHROG	UHGV-1465336_25	phrog_98	48.2	0.0000000000002	N/A	unknown function
UniRef90	UHGV-1465336_25	UniRef90_UPI0018A916C2	251.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1465336_25	1414720.CBYM010000002_gene585	216.0	0	YopX protein	N/A
Pfam	UHGV-1465336_25	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1465336_25	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465336_26	PF11148,MF_01553,COG5503	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_27	phrog_10086	77.8	1e-22	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465336_27	UniRef90_A0A1C6K8P7	154.0	0	TrmB domain-containing protein	N/A
Pfam	UHGV-1465336_27	PF12802	N/A	N/A	MarR family	MarR_2
structural_annotation	UHGV-1465336_27	PF01978,MF_01911,NF033789,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1465336_28	phrog_824	152.1	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1465336_28	UniRef90_UPI0018AB5F85	223.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1465336_28	1414720.CBYM010000002_gene588	197.0	0	VRR-NUC domain	N/A
Pfam	UHGV-1465336_28	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-1465336_29	phrog_1065	133.6	9.6e-40	N/A	unknown function
UniRef90	UHGV-1465336_29	UniRef90_A0A161XG28	87.8	1.19e-18	HTH DNA binding domain protein	N/A
eggNOG-mapper	UHGV-1465336_29	1443122.Z958_p0016	75.5	0.00000000000000584	N/A	N/A
PHROG	UHGV-1465336_30	phrog_3584	282.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465336_30	UniRef90_I2E8X7	238.0	0	Gp31	N/A
eggNOG-mapper	UHGV-1465336_30	1414720.CBYM010000002_gene589	465.0	0	N/A	N/A
structural_annotation	UHGV-1465336_30	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-1465336_35	K18830	61.6	1.7e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1465336_35	phrog_8	46.1	0.00000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-1465336_35	UniRef90_A0A1C6JLU0	238.0	0	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-1465336_35	1414720.CBYM010000002_gene594	238.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1465336_35	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1465336_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1465336_35	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1465336_36	K06400	282.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1465336_36	phrog_95	302.4	0	integrase	integration and excision
UniRef90	UHGV-1465336_36	UniRef90_A0A1C6JLN1	989.0	0	DNA-invertase hin	N/A
eggNOG-mapper	UHGV-1465336_36	1414720.CBYM010000002_gene595	987.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1465336_36	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1465336_36	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1465336_36	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1465336_37	K03976	122.0	6e-36	ybaK, ebsC; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]	N/A
PHROG	UHGV-1465336_37	phrog_17858	90.9	1.2e-26	N/A	unknown function
UniRef90	UHGV-1465336_37	UniRef90_UPI0018ABA7A5	201.0	0	Cys-tRNA(Pro) deacylase	N/A
eggNOG-mapper	UHGV-1465336_37	1414720.CBYM010000002_gene596	186.0	0	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily	N/A
Pfam	UHGV-1465336_37	PF04073	N/A	N/A	Aminoacyl-tRNA editing domain	tRNA_edit
COG	UHGV-1465336_37	COG2606	N/A	N/A	Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC	N/A
KOfam	UHGV-1465336_38	K11927	119.6	3.5e-35	rhlE; ATP-dependent RNA helicase RhlE [EC:3.6.4.13]	N/A
UniRef90	UHGV-1465336_38	UniRef90_A0A2N2JF56	105.0	1.07e-26	DEAD/DEAH box helicase (Fragment)	N/A
eggNOG-mapper	UHGV-1465336_38	545697.HMPREF0216_01458	145.0	3.32e-40	DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes	N/A
Pfam	UHGV-1465336_38	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1465336_38	COG0513	N/A	N/A	Superfamily II DNA and RNA helicase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1465336	Yes	24,041	29	62	1
UHGV-0107757	No	17,756	30	46	1