vOTU vOTU-035625

vOTU: vOTU-035625

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035625
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00187 → vGENUS-00218 → vOTU-035625
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1471925
Biosample ID	N/A
Genome length (bp)	30,637 bps
CheckV completeness	66.22% (Medium-quality)
CDS count	37
CDS density	93.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	5	Host agreement	80
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1471925_1	phrog_28782	98.1	5.7e-29	N/A	unknown function
UniRef90	UHGV-1471925_1	UniRef90_UPI0018774E0E	325.0	0	reductase	N/A
eggNOG-mapper	UHGV-1471925_1	1235835.C814_01169	298.0	0	N/A	N/A
COG	UHGV-1471925_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1471925_1	PF01507,NF006327	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_2	phrog_1252	458.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471925_2	UniRef90_UPI00189DB5D1	748.0	0	DNA polymerase elongation subunit (family B)	N/A
eggNOG-mapper	UHGV-1471925_2	1121866.AUGK01000003_gene1403	516.0	0	DNA replication proofreading	N/A
COG	UHGV-1471925_2	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1471925_2	PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_3	phrog_757	102.1	4.6e-30	DNA methyltransferase	other
UniRef90	UHGV-1471925_3	UniRef90_UPI00189BA758	178.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1471925_3	742733.HMPREF9469_01835	171.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1471925_3	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1471925_4	K18959	182.1	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-1471925_4	phrog_16	178.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471925_4	UniRef90_H1CET1	811.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1471925_4	1232453.BAIF02000010_gene3343	515.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-1471925_4	mREase_IV_00004	40.6	0.000000000018	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1471925_4	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1471925_4	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1471925_4	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1471925_4	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_5	phrog_843	45.5	0.00000000000062	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471925_5	UniRef90_UPI0018982E6D	211.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-1471925_5	1449050.JNLE01000003_gene3909	123.0	5.67e-34	Recombination protein U	N/A
structural_annotation	UHGV-1471925_5	PF03838,MF_01490,NF002581,COG1591	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1471925_6	888060.HMPREF9081_1715	49.7	0.00000147	N/A	N/A
PHROG	UHGV-1471925_7	phrog_37900	71.1	2.5e-22	N/A	unknown function
UniRef90	UHGV-1471925_7	UniRef90_H1CET4	390.0	0	N/A	N/A
eggNOG-mapper	UHGV-1471925_7	1121866.AUGK01000004_gene188	80.1	0.0000000000000164	serine threonine protein kinase	N/A
Pfam	UHGV-1471925_7	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1471925_7	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1471925_7	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-1471925_10	K01356	96.0	6.3e-28	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1471925_10	phrog_4	130.7	1.3e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-1471925_10	UniRef90_UPI00164CF79B	160.0	0	S24 family peptidase	N/A
eggNOG-mapper	UHGV-1471925_10	401526.TcarDRAFT_1271	121.0	1.25e-31	Peptidase S24-like	N/A
Pfam	UHGV-1471925_10	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-1471925_10	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1471925_10	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1471925_10	PF00717,PF12844,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-1471925_11	K06400	354.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1471925_11	phrog_95	346.3	0	integrase	integration and excision
UniRef90	UHGV-1471925_11	UniRef90_UPI00164E9A6A	725.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1471925_11	663278.Ethha_0939	375.0	0	N/A	N/A
Pfam	UHGV-1471925_11	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1471925_11	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1471925_11	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1471925_11	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1471925_11	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_14	phrog_14030	44.2	0.0000000000012	N/A	unknown function
UniRef90	UHGV-1471925_14	UniRef90_H1CEM5	491.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-1471925_14	1235797.C816_02842	228.0	0	mannosyl-glycoprotein	N/A
Pfam	UHGV-1471925_14	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1471925_14	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1471925_14	PF05382,NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_15	phrog_13256	62.4	4.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1471925_15	1226322.HMPREF1545_00166	72.8	4.52e-16	N/A	N/A
PHROG	UHGV-1471925_16	phrog_1863	71.5	6.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-1471925_16	748224.HMPREF9436_00408	99.8	1.1e-26	N/A	N/A
eggNOG-mapper	UHGV-1471925_17	1235797.C816_04174	182.0	0	N/A	N/A
structural_annotation	UHGV-1471925_17	PF14600	N/A	N/A	N/A	N/A
KOfam	UHGV-1471925_19	K00986	66.7	3.5e-19	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-1471925_19	phrog_1423	172.3	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1471925_19	UniRef90_H1CEN0	681.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-1471925_19	1410650.JHWL01000003_gene2820	233.0	0	Reverse transcriptase	N/A
PADLOC	UHGV-1471925_19	icity0040	55.9	8.4e-16	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-1471925_19	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-1471925_19	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-1471925_19	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_20	phrog_30516	44.2	0.00000000000044	N/A	unknown function
structural_annotation	UHGV-1471925_20	PF05635,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_21	phrog_37900	94.8	1.9e-29	N/A	unknown function
UniRef90	UHGV-1471925_21	UniRef90_UPI001AB049E6	530.0	0	N/A	N/A
eggNOG-mapper	UHGV-1471925_21	1519439.JPJG01000060_gene1894	192.0	0	N/A	N/A
Pfam	UHGV-1471925_21	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1471925_21	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1471925_21	PF19789,PF14686,TIGR04183,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_22	phrog_18725	67.8	1.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1471925_22	693746.OBV_18220	102.0	1.81e-25	N/A	N/A
PHROG	UHGV-1471925_23	phrog_13879	297.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1471925_23	665956.HMPREF1032_03630	249.0	0	N/A	N/A
structural_annotation	UHGV-1471925_23	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_24	phrog_1194	91.0	9.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-1471925_24	742740.HMPREF9474_03515	130.0	2.77e-37	N/A	N/A
structural_annotation	UHGV-1471925_24	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_25	phrog_1535	191.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1471925_25	1121866.AUGK01000003_gene1437	315.0	0	phage tail tape measure protein	N/A
COG	UHGV-1471925_25	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1471925_26	1121333.JMLH01000047_gene1011	52.4	0.000000469	N/A	N/A
UniRef90	UHGV-1471925_27	UniRef90_UPI0018999178	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-1471925_27	1123263.AUKY01000015_gene1618	82.4	6.94e-19	N/A	N/A
Pfam	UHGV-1471925_27	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1471925_27	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_28	phrog_158	59.7	5.4e-17	major tail protein	tail
UniRef90	UHGV-1471925_28	UniRef90_UPI00164D954A	244.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1471925_28	1232453.BAIF02000058_gene1634	95.1	4.05e-23	N/A	N/A
structural_annotation	UHGV-1471925_28	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1471925_29	469596.HMPREF9488_01309	50.4	0.00000427	N/A	N/A
structural_annotation	UHGV-1471925_29	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1471925_30	1298920.KI911353_gene2654	57.8	0.00000005	N/A	N/A
eggNOG-mapper	UHGV-1471925_31	1298920.KI911353_gene2656	83.6	7.37e-19	N/A	N/A
UniRef90	UHGV-1471925_32	UniRef90_UPI001898B4B4	172.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1471925_32	1298920.KI911353_gene2658	58.9	0.000000000951	N/A	N/A
Pfam	UHGV-1471925_32	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1471925_32	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_33	phrog_1328	113.8	1e-33	major head protein	head and packaging
UniRef90	UHGV-1471925_33	UniRef90_UPI00164DD2D5	575.0	0	N/A	N/A
eggNOG-mapper	UHGV-1471925_33	665956.HMPREF1032_03619	225.0	0	N/A	N/A
Pfam	UHGV-1471925_33	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1471925_33	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_36	phrog_64	212.7	0	portal protein	head and packaging
UniRef90	UHGV-1471925_36	UniRef90_A0A6I2QXE1	749.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1471925_36	1123263.AUKY01000015_gene1609	428.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1471925_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1471925_36	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1471925_37	phrog_38	124.8	7.4e-37	terminase large subunit	head and packaging
UniRef90	UHGV-1471925_37	UniRef90_A0A6I2QXZ5	617.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1471925_37	1298920.KI911353_gene2682	191.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1471925_37	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1471925_37	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1471925_37	PF17289,MF_04147,NF033889,COG5362	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1471925	Yes	30,637	50	66	1
UHGV-1690890	No	14,527	50	33	1