vOTU vOTU-035782

vOTU: vOTU-035782

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035782
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vOTU-035782
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp900317525
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1463896
Biosample ID	SAMEA2159974
Genome length (bp)	20,368 bps
CheckV completeness	70.76% (Medium-quality)
CDS count	26
CDS density	89.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp900317525	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1463896_1	411469.EUBHAL_01136	62.4	0.0000000072	VanW like protein	N/A
COG	UHGV-1463896_1	COG2720	N/A	N/A	Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains	N/A
eggNOG-mapper	UHGV-1463896_2	1384065.JAGS01000001_gene2507	57.0	0.00000173	domain, Protein	N/A
COG	UHGV-1463896_2	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
KOfam	UHGV-1463896_7	K03111	99.6	5.2e-29	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1463896_7	phrog_44	101.1	1.2e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463896_7	UniRef90_A0A354D3Q0	97.1	4.25e-23	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1463896_7	397290.C810_04698	93.6	1.89e-22	Single-strand binding protein family	N/A
Pfam	UHGV-1463896_7	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1463896_7	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1463896_7	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1463896_7	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1463896_7	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1463896_8	phrog_2150	79.6	3e-23	terminase	head and packaging
structural_annotation	UHGV-1463896_10	PF13604,MF_01488,TIGR01448,COG0507	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463896_12	1046629.Ssal_00738	58.2	0.000000633	KxYKxGKxW signal domain protein	N/A
Pfam	UHGV-1463896_12	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1463896_12	COG0366	N/A	N/A	Glycosidase/amylase (phosphorylase)	N/A
structural_annotation	UHGV-1463896_14	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-1463896_15	phrog_2038	58.0	5.3e-17	upper collar connector	connector
PHROG	UHGV-1463896_19	phrog_4898	42.0	0.000000000012	holin	lysis
PHROG	UHGV-1463896_21	phrog_2006	113.5	1.7e-34	major head protein	head and packaging
structural_annotation	UHGV-1463896_21	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463896_23	742733.HMPREF9469_02856	58.2	0.000000809	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
COG	UHGV-1463896_23	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1463896	Yes	20,368	41	71	1
UHGV-0052991	No	20,368	41	71	1
UHGV-1481998	No	19,468	40	68	1