vOTU vOTU-035833

vOTU: vOTU-035833

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035833
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00102 → vSUBFAM-00709 → vGENUS-00656 → vOTU-035833
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900554225
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1485816
Biosample ID	N/A
Genome length (bp)	39,258 bps
CheckV completeness	68.38% (Medium-quality)
CDS count	64
CDS density	91.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900554225	Total connections	20	Host agreement	90
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-1485816_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
PHROG	UHGV-1485816_5	phrog_2172	135.1	3.60001e-40	N/A	unknown function
UniRef90	UHGV-1485816_5	UniRef90_W1I4H7	171.0	0	Uncultured bacterium plasmid pRGI00071	N/A
eggNOG-mapper	UHGV-1485816_5	1408311.JNJM01000024_gene619	147.0	2.4e-40	Initiator Replication protein	N/A
Pfam	UHGV-1485816_5	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-1485816_5	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-1485816_5	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-1485816_5	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
KOfam	UHGV-1485816_6	K14060	118.5	6.7e-35	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1485816_6	phrog_125	162.4	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1485816_6	UniRef90_A0A7X7EJJ7	170.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1485816_6	877420.ATVW01000008_gene521	170.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1485816_6	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1485816_6	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1485816_6	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1485816_8	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_9	phrog_20016	194.3	0	N/A	unknown function
UniRef90	UHGV-1485816_9	UniRef90_A0A2Z4QB67	170.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-1485816_9	1226322.HMPREF1545_00077	163.0	0	N/A	N/A
structural_annotation	UHGV-1485816_9	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_10	phrog_16490	123.4	2.2e-37	N/A	unknown function
eggNOG-mapper	UHGV-1485816_10	397290.C810_01328	99.0	1.51e-21	N/A	N/A
PHROG	UHGV-1485816_11	phrog_22984	73.0	3.6e-21	N/A	unknown function
PHROG	UHGV-1485816_12	phrog_21718	122.0	3.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-1485816_12	397290.C810_05210	94.4	2.47e-22	N/A	N/A
PHROG	UHGV-1485816_13	phrog_3754	107.0	1.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-1485816_13	476272.RUMHYD_01764	163.0	0	N/A	N/A
eggNOG-mapper	UHGV-1485816_15	693746.OBV_19020	63.5	0.00000000000328	N/A	N/A
KOfam	UHGV-1485816_17	K19304	114.8	1.1e-33	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1485816_17	phrog_7767	106.3	1.5e-31	metallo-endopeptidase	other
UniRef90	UHGV-1485816_17	UniRef90_A0A2E4G218	67.4	0.00000000834	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1485816_17	1449126.JQKL01000043_gene1877	92.8	4.05e-19	Peptidase family M23	N/A
Pfam	UHGV-1485816_17	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-1485816_17	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1485816_17	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_18	phrog_4105	77.0	2.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1485816_18	537013.CLOSTMETH_01753	55.8	0.0000000101	N/A	N/A
PHROG	UHGV-1485816_20	phrog_10972	41.2	0.000000000018	tail fiber protein	tail
eggNOG-mapper	UHGV-1485816_20	1437609.BCAL_1712	54.7	0.00000602	N/A	N/A
PHROG	UHGV-1485816_21	phrog_38337	42.2	0.0000000000073	N/A	unknown function
eggNOG-mapper	UHGV-1485816_21	1298920.KI911353_gene541	62.8	0.0000000109	ATPase involved in DNA repair	N/A
COG	UHGV-1485816_21	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-1485816_22	931626.Awo_c11420	68.9	0.000000000314	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-1485816_22	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1485816_22	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1485816_22	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_23	phrog_13589	41.8	0.0000000000062	N/A	unknown function
eggNOG-mapper	UHGV-1485816_23	1298920.KI911353_gene4836	61.2	0.0000000089	ATPase involved in DNA repair	N/A
COG	UHGV-1485816_23	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1485816_24	phrog_3904	44.5	0.0000000000000049	tail fiber protein	tail
COG	UHGV-1485816_24	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1485816_24	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1485816_27	1449126.JQKL01000002_gene1688	84.3	0.0000000000000128	N/A	N/A
structural_annotation	UHGV-1485816_27	PF11134,NF038128,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1485816_28	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_30	phrog_14242	98.2	6e-29	major head protein	head and packaging
UniRef90	UHGV-1485816_30	UniRef90_A0A3D2CI53	325.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1485816_30	935948.KE386495_gene2267	58.2	0.00000217	N/A	N/A
NCBIFam	UHGV-1485816_30	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1485816_30	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_32	phrog_156	108.7	5.2e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-1485816_32	588581.Cpap_1526	283.0	0	N/A	N/A
structural_annotation	UHGV-1485816_32	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1485816_35	K06909	286.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1485816_35	phrog_3717	199.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1485816_35	UniRef90_A0A3S1ABC6	471.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1485816_35	696281.Desru_1088	446.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1485816_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1485816_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1485816_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1485816_35	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_36	phrog_606	51.2	0.000000000000021	terminase small subunit	head and packaging
Pfam	UHGV-1485816_36	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1485816_36	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1485816_38	K07729	53.5	6.1e-27	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1485816_38	phrog_3	40.0	1.1e-22	transcriptional repressor	transcription regulation
eggNOG-mapper	UHGV-1485816_38	566552.BIFCAT_01439	69.7	0.0000000000149	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1485816_38	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-1485816_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1485816_38	PF01381,NF041951,COG1476,COG4068	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1485816_39	NF040976	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_41	phrog_3292	47.1	0.00000000000035	N/A	unknown function
UniRef90	UHGV-1485816_41	UniRef90_M1WWV3	63.5	0.0000000000287	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-1485816_41	1117319.PSPO_09654	68.2	0.00000000000593	KTSC domain	N/A
Pfam	UHGV-1485816_41	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-1485816_41	COG1190	N/A	N/A	Lysyl-tRNA synthetase (class II)	N/A
structural_annotation	UHGV-1485816_41	PF13619	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1485816_43	471855.Shel_04260	61.2	0.000000243	dextransucrase activity	N/A
COG	UHGV-1485816_43	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
KOfam	UHGV-1485816_45	K22300	74.0	2.7e-21	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1485816_45	phrog_8	61.4	2.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1485816_45	UniRef90_Q7M7C4	60.8	0.0000000061	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1485816_45	1346.DQ08_00565	57.4	0.0000000112	sequence-specific DNA binding	N/A
Pfam	UHGV-1485816_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1485816_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1485816_45	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1485816_46	K22300	64.0	3.3e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1485816_46	phrog_4	47.1	0.00000000000056	transcriptional repressor	transcription regulation
UniRef90	UHGV-1485816_46	UniRef90_R9K5V7	100.0	5.94e-25	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1485816_46	397290.C810_05152	100.0	9.96e-26	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1485816_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1485816_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1485816_46	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_53	phrog_14970	240.5	0	N/A	unknown function
UniRef90	UHGV-1485816_53	UniRef90_UPI00164BFA28	214.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1485816_53	697329.Rumal_1121	189.0	0	double-strand break repair protein	N/A
Pfam	UHGV-1485816_53	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1485816_53	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1485816_53	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_55	phrog_2205	113.2	1.7e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1485816_55	UniRef90_UPI001E2B9DFF	72.8	0.000000000000746	host-nuclease inhibitor Gam family protein	N/A
eggNOG-mapper	UHGV-1485816_55	1519439.JPJG01000051_gene723	70.9	0.0000000000014	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-1485816_55	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-1485816_55	PF07352	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_56	phrog_72	60.4	2.5e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1485816_56	UniRef90_A0A8D9PDS2	165.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1485816_56	445972.ANACOL_01825	141.0	2.95e-40	N/A	N/A
structural_annotation	UHGV-1485816_56	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1485816_57	phrog_1163	105.0	1.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1485816_57	278197.PEPE_1019	100.0	1.14e-21	DnaD domain protein	N/A
Pfam	UHGV-1485816_57	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-1485816_57	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-1485816_57	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-1485816_58	K02315	156.8	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1485816_58	phrog_50	146.1	2.39622e-43	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1485816_58	UniRef90_R6WX70	189.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1485816_58	203119.Cthe_2467	181.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1485816_58	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1485816_58	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1485816_58	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1485816_58	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1485816	Yes	39,258	50	68	1
UHGV-1811582	No	27,824	51	48	1