vOTU vOTU-035863

vOTU: vOTU-035863

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-035863
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vOTU-035863
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1488307
Biosample ID	SAMEA2737885
Genome length (bp)	19,550 bps
CheckV completeness	51.57% (Medium-quality)
CDS count	31
CDS density	92.64%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1488307_1	1173029.JH980292_gene3351	55.1	0.0000002	N/A	N/A
PHROG	UHGV-1488307_2	phrog_1281	130.2	9.9e-39	N/A	unknown function
UniRef90	UHGV-1488307_2	UniRef90_A0A374AHH0	186.0	0	N/A	N/A
eggNOG-mapper	UHGV-1488307_2	61647.LG71_03530	168.0	0	Phage-associated protein	N/A
Pfam	UHGV-1488307_2	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1488307_2	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1488307_2	PF13274,COG3600	N/A	N/A	N/A	N/A
KOfam	UHGV-1488307_3	K01448	96.6	3.1e-28	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1488307_3	phrog_435	175.5	0	endolysin	lysis
UniRef90	UHGV-1488307_3	UniRef90_UPI0008317F47	326.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1488307_3	411461.DORFOR_01187	211.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1488307_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1488307_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1488307_3	PF01520,MF_00562,TIGR02883,COG0860,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_4	phrog_962	73.4	3.6e-21	holin	lysis
UniRef90	UHGV-1488307_4	UniRef90_UPI001655FC48	99.0	2.22e-25	phage holin	N/A
eggNOG-mapper	UHGV-1488307_4	887929.HMP0721_1251	94.7	2.27e-24	Bacteriophage holin	N/A
Pfam	UHGV-1488307_4	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1488307_4	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1488307_4	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1488307_4	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_5	phrog_4257	72.4	7e-21	N/A	unknown function
eggNOG-mapper	UHGV-1488307_5	1005705.HMPREF9967_1056	56.2	0.000000033	N/A	N/A
PHROG	UHGV-1488307_6	phrog_9994	126.9	1.6e-37	N/A	unknown function
UniRef90	UHGV-1488307_6	UniRef90_A0A6L8RVX5	85.5	6.31e-16	H_lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-1488307_6	1321814.HMPREF9089_00941	178.0	0	N/A	N/A
structural_annotation	UHGV-1488307_6	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_7	phrog_538	112.3	4.5e-33	minor tail protein	tail
UniRef90	UHGV-1488307_7	UniRef90_UPI001F3E20C1	145.0	2.94e-37	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1488307_7	411461.DORFOR_00733	134.0	1.14e-33	N/A	N/A
Pfam	UHGV-1488307_7	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1488307_7	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_8	phrog_33	40.0	0.000000000085	distal tail protein Dit	tail
eggNOG-mapper	UHGV-1488307_8	1280698.AUJS01000007_gene1048	144.0	7.04e-39	N/A	N/A
structural_annotation	UHGV-1488307_8	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1488307_9	K10421	51.9	0.0000000000000047	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1488307_9	phrog_1533	472.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1488307_9	UniRef90_UPI0004132D49	385.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1488307_9	1118059.CAHC01000003_gene808	382.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1488307_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1488307_9	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1488307_9	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1488307_10	phrog_3033	49.6	0.000000000000066	N/A	unknown function
PHROG	UHGV-1488307_12	phrog_88	168.9	0	major tail protein	tail
UniRef90	UHGV-1488307_12	UniRef90_A0A1K1YNJ2	204.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1488307_12	1384066.JAGT01000001_gene932	203.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1488307_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1488307_12	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1488307_13	1123315.AUIP01000001_gene1429	53.1	0.00000013	N/A	N/A
structural_annotation	UHGV-1488307_13	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
UniRef90	UHGV-1488307_14	UniRef90_UPI00040399DB	80.9	4.41e-17	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1488307_14	1121871.AUAT01000030_gene1030	80.9	7.4e-18	N/A	N/A
Pfam	UHGV-1488307_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1488307_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_15	phrog_19734	51.2	0.000000000000023	N/A	unknown function
eggNOG-mapper	UHGV-1488307_15	1235792.C808_00088	75.9	3.93e-16	N/A	N/A
structural_annotation	UHGV-1488307_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_16	phrog_749	62.7	5.5e-18	N/A	unknown function
UniRef90	UHGV-1488307_16	UniRef90_A0A371IJS1	74.7	0.00000000000000126	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1488307_16	1235792.C808_00087	76.3	6.78e-17	N/A	N/A
PHROG	UHGV-1488307_17	phrog_10	138.7	4.39994e-41	major head protein	head and packaging
UniRef90	UHGV-1488307_17	UniRef90_UPI001E2BCFCB	362.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1488307_17	1235792.C808_00086	347.0	0	Phage capsid family	N/A
Pfam	UHGV-1488307_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1488307_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1488307_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1488307_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1488307_18	K01358	152.5	4.2039e-45	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1488307_18	phrog_94	219.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1488307_18	UniRef90_UPI000541F099	187.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1488307_18	1232452.BAIB02000007_gene1626	171.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1488307_18	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1488307_18	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1488307_18	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_19	phrog_12	106.1	2.9e-31	portal protein	head and packaging
UniRef90	UHGV-1488307_19	UniRef90_A4J7R3	308.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1488307_19	349161.Dred_2606	308.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1488307_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1488307_19	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1488307_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1488307_19	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_20	phrog_9	238.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1488307_20	UniRef90_A0A1M6MVG1	644.0	0	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
eggNOG-mapper	UHGV-1488307_20	1235792.C808_00083	634.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1488307_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1488307_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1488307_20	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_21	phrog_5110	106.3	1.5e-31	terminase small subunit	head and packaging
UniRef90	UHGV-1488307_21	UniRef90_UPI001E64C17F	97.4	3.1e-24	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1488307_21	349161.Dred_2608	94.4	8.77e-24	N/A	N/A
Pfam	UHGV-1488307_21	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1488307_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_22	phrog_119	73.5	2.8e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1488307_22	UniRef90_A0A7X8Z9F1	94.4	3.36e-23	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1488307_22	86416.Clopa_0335	67.8	0.000000000000204	HNH nucleases	N/A
Pfam	UHGV-1488307_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1488307_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
Pfam	UHGV-1488307_23	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
structural_annotation	UHGV-1488307_23	PF07878,NF010256,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1488307_27	phrog_190	113.2	2.3e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1488307_27	UniRef90_A0A4S1EGJ7	94.0	1.55e-22	N/A	N/A
eggNOG-mapper	UHGV-1488307_27	693746.OBV_25250	92.4	2.94e-22	N/A	N/A
Pfam	UHGV-1488307_27	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1488307_27	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1488307_30	K03111	120.5	2.3e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1488307_30	phrog_44	116.7	2.4e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1488307_30	UniRef90_V1CFG6	168.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1488307_30	1321814.HMPREF9089_01469	168.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1488307_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1488307_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1488307_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1488307_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1488307_30	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1488307	Yes	19,550	40	52	1
UHGV-1589287	No	16,895	40	45	1