vOTU vOTU-036230

vOTU: vOTU-036230

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-036230
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00043 → vGENUS-14347 → vOTU-036230
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0080535
Biosample ID	N/A
Genome length (bp)	29,785 bps
CheckV completeness	72.39% (Medium-quality)
CDS count	42
CDS density	95.09%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	8	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0080535_1	phrog_6616	462.1	0	tail protein	tail
UniRef90	UHGV-0080535_1	UniRef90_A0A414EG21	383.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0080535_1	33035.JPJF01000043_gene1002	310.0	0	N/A	N/A
structural_annotation	UHGV-0080535_1	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_2	phrog_1194	61.6	1.3e-17	N/A	unknown function
structural_annotation	UHGV-0080535_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0080535_3	K10421	48.2	0.0000000000000092	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0080535_3	phrog_1535	449.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0080535_3	UniRef90_A0A174LLY7	778.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0080535_3	411459.RUMOBE_01384	697.0	0	phage tail tape measure protein	N/A
COG	UHGV-0080535_3	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0080535_4	phrog_706	135.5	3.4e-40	N/A	unknown function
UniRef90	UHGV-0080535_4	UniRef90_UPI00189FC907	384.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0080535_4	476272.RUMHYD_01784	204.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0080535_4	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0080535_4	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_5	phrog_11299	130.5	5.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0080535_5	33035.JPJF01000106_gene3125	88.2	3.17e-20	N/A	N/A
structural_annotation	UHGV-0080535_5	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_6	phrog_3099	134.4	6.89999e-40	N/A	unknown function
eggNOG-mapper	UHGV-0080535_6	476272.RUMHYD_01782	239.0	0	N/A	N/A
structural_annotation	UHGV-0080535_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_7	phrog_3266	106.8	1.5e-31	tail completion	connector
eggNOG-mapper	UHGV-0080535_7	663278.Ethha_0098	52.4	0.00000151	N/A	N/A
structural_annotation	UHGV-0080535_7	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_8	phrog_556	71.8	8.7e-21	minor head protein	head and packaging
UniRef90	UHGV-0080535_8	UniRef90_UPI000930E2B9	283.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0080535_8	1449050.JNLE01000003_gene3886	79.0	1.1e-16	N/A	N/A
Pfam	UHGV-0080535_8	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0080535_8	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_9	phrog_3366	102.9	2.5e-30	N/A	unknown function
Pfam	UHGV-0080535_9	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0080535_9	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_10	phrog_541	104.3	8.4e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0080535_10	1304866.K413DRAFT_3039	72.0	0.0000000000000195	N/A	N/A
PHROG	UHGV-0080535_11	phrog_10	183.0	0	major head protein	head and packaging
UniRef90	UHGV-0080535_11	UniRef90_UPI00157128C8	590.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0080535_11	411461.DORFOR_00744	559.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-0080535_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0080535_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0080535_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0080535_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_12	phrog_2303	117.6	1.3e-34	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0080535_12	411461.DORFOR_00745	163.0	0	N/A	N/A
AcrCatalog	UHGV-0080535_12	cluster_74817	88.2	4.57e-24	NA	N/A
structural_annotation	UHGV-0080535_12	PF10788,MF_02110	N/A	N/A	N/A	N/A
KOfam	UHGV-0080535_13	K07584	67.5	2.7e-19	N/A	N/A
PHROG	UHGV-0080535_13	phrog_4478	84.9	6.8e-25	peptidase	other
UniRef90	UHGV-0080535_13	UniRef90_UPI00156D7F8B	171.0	0	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0080535_13	411461.DORFOR_00746	122.0	2.44e-35	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0080535_13	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0080535_13	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080535_13	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_14	phrog_355	52.9	0.0000000000000066	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080535_14	UniRef90_UPI0018A09237	195.0	0	N/A	N/A
eggNOG-mapper	UHGV-0080535_14	397290.C810_05229	168.0	0	N/A	N/A
structural_annotation	UHGV-0080535_14	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_16	phrog_581	305.5	0	minor head protein	head and packaging
UniRef90	UHGV-0080535_16	UniRef90_UPI000930F4BD	926.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0080535_16	411461.DORFOR_01164	345.0	0	N/A	N/A
Pfam	UHGV-0080535_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0080535_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080535_16	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_17	phrog_533	397.4	0	portal protein	head and packaging
UniRef90	UHGV-0080535_17	UniRef90_UPI001897501E	802.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0080535_17	411461.DORFOR_00749	664.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-0080535_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0080535_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0080535_18	K06909	192.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0080535_18	phrog_10250	106.1	1.3e-31	N/A	unknown function
UniRef90	UHGV-0080535_18	UniRef90_UPI0018985A97	767.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0080535_18	411461.DORFOR_00750	665.0	0	COG COG1783 Phage terminase large subunit	N/A
Pfam	UHGV-0080535_18	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0080535_18	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0080535_18	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0080535_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0080535_18	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0080535_19	K07474	121.5	1.2e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0080535_19	phrog_2606	346.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0080535_19	UniRef90_A0A416BKP7	410.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0080535_19	478749.BRYFOR_07604	320.0	0	terminase, small subunit	N/A
Pfam	UHGV-0080535_19	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0080535_19	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0080535_19	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0080535_19	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080535_20	PF15968	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0080535_21	1009370.ALO_15872	154.0	8.09951e-42	N/A	N/A
structural_annotation	UHGV-0080535_21	PF20505,MF_00194,NF001463,COG2974	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_22	phrog_36	66.9	3.9e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0080535_22	UniRef90_UPI001D089637	158.0	0	N/A	N/A
eggNOG-mapper	UHGV-0080535_22	1304866.K413DRAFT_3028	182.0	0	N/A	N/A
structural_annotation	UHGV-0080535_22	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_23	phrog_19011	121.8	1.4e-36	N/A	unknown function
structural_annotation	UHGV-0080535_23	PF18359,COG4466	N/A	N/A	N/A	N/A
KOfam	UHGV-0080535_26	K00558	219.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0080535_26	phrog_116	262.8	0	DNA methyltransferase	other
UniRef90	UHGV-0080535_26	UniRef90_UPI000E43289D	971.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0080535_26	1235800.C819_02255	667.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0080535_26	MTase_II_00020	110.7	9e-35	Type II methyltransferase	RM
Pfam	UHGV-0080535_26	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0080535_26	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0080535_26	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_29	phrog_2562	173.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080535_29	UniRef90_A0A415L5F5	515.0	0	N/A	N/A
eggNOG-mapper	UHGV-0080535_29	411461.DORFOR_00014	223.0	0	N/A	N/A
Pfam	UHGV-0080535_29	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0080535_29	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0080535_29	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0080535_30	K01160	49.8	0.0000000000001	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0080535_30	phrog_140	122.7	2.5e-36	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080535_30	UniRef90_A0A415L586	267.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0080535_30	411459.RUMOBE_01038	127.0	1.46e-35	COG COG4570 Holliday junction resolvase	N/A
Pfam	UHGV-0080535_30	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0080535_30	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0080535_30	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_31	phrog_1029	288.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0080535_31	411461.DORFOR_00016	263.0	0	N/A	N/A
structural_annotation	UHGV-0080535_31	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_32	phrog_997	156.3	0	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080535_32	UniRef90_A0A1P8Q4A1	91.3	1.01e-20	Replication terminator protein	N/A
eggNOG-mapper	UHGV-0080535_32	411461.DORFOR_00017	159.0	0	N/A	N/A
KOfam	UHGV-0080535_33	K07455	286.5	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0080535_33	phrog_148	279.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080535_33	UniRef90_A0A415L5D0	520.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0080535_33	658088.HMPREF0987_00529	367.0	0	RecT family	N/A
Pfam	UHGV-0080535_33	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0080535_33	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0080535_33	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0080535_33	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_34	phrog_434	345.4	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0080535_34	UniRef90_A0A415L5E5	596.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0080535_34	97139.C824_05807	367.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0080535_34	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0080535_34	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0080535_34	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0080535_34	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_38	phrog_6058	55.9	4.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0080535_38	742733.HMPREF9469_05094	71.2	0.00000000000000646	N/A	N/A
structural_annotation	UHGV-0080535_38	PF12728,NF040990	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0080535_40	PF02185	N/A	N/A	N/A	N/A
PHROG	UHGV-0080535_41	phrog_8	54.3	0.0000000000000033	transcriptional regulator	transcription regulation
UniRef90	UHGV-0080535_41	UniRef90_A5ZPP3	119.0	7.26e-34	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0080535_41	411459.RUMOBE_00960	119.0	1.22e-34	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0080535_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0080535_41	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0080535_42	K22300	52.7	0.0000000000000087	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0080535_42	phrog_8	69.0	9.1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0080535_42	UniRef90_A5ZPP4	257.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0080535_42	411459.RUMOBE_00961	257.0	0	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0080535_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0080535_42	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0080535_42	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0080535	Yes	29,785	42	72	1
UHGV-1532904	No	29,939	42	75	1
UHGV-1513414	No	28,309	42	71	1