vOTU vOTU-036293

vOTU: vOTU-036293

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-036293
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-06715 → vOTU-036293
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0074372
Biosample ID	N/A
Genome length (bp)	22,952 bps
CheckV completeness	57.27% (Medium-quality)
CDS count	37
CDS density	92.88%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	102	Host agreement	98.04
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp001916835	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.27)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0074372_1	1226322.HMPREF1545_03794	153.0	5.60519e-45	N/A	N/A
KOfam	UHGV-0074372_2	K01449	97.2	2.6e-28	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0074372_2	phrog_938	40.8	0.0000000000074	endolysin	lysis
UniRef90	UHGV-0074372_2	UniRef90_R9M243	292.0	0	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0074372_2	1235797.C816_02623	292.0	0	Cell Wall Hydrolase	N/A
Pfam	UHGV-0074372_2	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0074372_2	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
UniRef90	UHGV-0074372_3	UniRef90_A0A1Q6RES0	169.0	0	TIGR03905 family protein	N/A
eggNOG-mapper	UHGV-0074372_3	1226322.HMPREF1545_03800	127.0	2.56e-37	TSCPD domain	N/A
Pfam	UHGV-0074372_3	PF12637	N/A	N/A	TSCPD domain	TSCPD
NCBIFam	UHGV-0074372_3	TIGR03905.1	N/A	N/A	TIGR03905 family TSCPD domain-containing protein	N/A
structural_annotation	UHGV-0074372_3	PF12637,TIGR03905	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0074372_4	1226322.HMPREF1545_00079	93.2	2.66e-23	N/A	N/A
structural_annotation	UHGV-0074372_5	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_6	phrog_20016	172.8	0	N/A	unknown function
UniRef90	UHGV-0074372_6	UniRef90_A0A2Z4QB67	167.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0074372_6	1226322.HMPREF1545_00077	153.0	0	N/A	N/A
structural_annotation	UHGV-0074372_6	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_7	phrog_16490	144.9	8.96831e-44	N/A	unknown function
eggNOG-mapper	UHGV-0074372_7	1408437.JNJN01000043_gene803	151.0	1.67035e-42	N/A	N/A
PHROG	UHGV-0074372_8	phrog_22984	84.2	9.2e-25	N/A	unknown function
PHROG	UHGV-0074372_9	phrog_21718	112.2	4.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0074372_9	397290.C810_05210	81.3	2.65e-17	N/A	N/A
PHROG	UHGV-0074372_10	phrog_3754	90.5	1.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0074372_10	1226322.HMPREF1545_00073	138.0	7.31996e-41	N/A	N/A
Pfam	UHGV-0074372_12	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0074372_12	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0074372_13	K08640	93.9	2.9e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0074372_13	phrog_894	97.0	2.4e-28	endolysin	lysis
UniRef90	UHGV-0074372_13	UniRef90_K1TJK4	221.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0074372_13	1235797.C816_04171	193.0	0	Peptidase M15	N/A
Pfam	UHGV-0074372_13	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0074372_13	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074372_13	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_14	phrog_18955	64.1	1.5e-18	N/A	unknown function
UniRef90	UHGV-0074372_14	UniRef90_UPI00164D2830	375.0	0	phosphodiester glycosidase family protein	N/A
Pfam	UHGV-0074372_14	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0074372_14	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-0074372_14	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_16	phrog_13256	71.9	5.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0074372_16	1226322.HMPREF1545_00132	72.8	3.33e-16	N/A	N/A
PHROG	UHGV-0074372_17	phrog_4105	75.1	8.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0074372_17	411460.RUMTOR_01326	56.6	0.00000000526	N/A	N/A
PHROG	UHGV-0074372_18	phrog_3904	72.2	5.3e-21	tail fiber protein	tail
eggNOG-mapper	UHGV-0074372_18	1519439.JPJG01000060_gene1892	63.2	0.0000000648	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0074372_18	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0074372_18	PF18463	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_19	phrog_32744	736.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0074372_19	1120998.AUFC01000030_gene2247	213.0	0	N/A	N/A
structural_annotation	UHGV-0074372_19	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_20	phrog_1194	43.5	0.0000000000049	N/A	unknown function
structural_annotation	UHGV-0074372_20	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_21	phrog_6900	263.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0074372_21	UniRef90_R5YSS7	296.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0074372_21	536233.CLO_1577	317.0	0	tape measure	N/A
COG	UHGV-0074372_21	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0074372_21	PF20155,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0074372_23	UniRef90_A0A285PXU7	70.1	0.00000000000084	Consensus disorder prediction	N/A
PHROG	UHGV-0074372_24	phrog_885	84.2	1.4e-24	major tail protein	tail
UniRef90	UHGV-0074372_24	UniRef90_A0A843J9F0	221.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0074372_24	1504822.CCNO01000012_gene492	254.0	0	N/A	N/A
structural_annotation	UHGV-0074372_24	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074372_25	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_26	phrog_17977	77.0	1.8e-22	N/A	unknown function
UniRef90	UHGV-0074372_26	UniRef90_A0A285PT57	93.6	2.3e-22	Phage head-tail joining protein	N/A
structural_annotation	UHGV-0074372_26	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_28	phrog_544	179.8	0	major head protein	head and packaging
UniRef90	UHGV-0074372_28	UniRef90_A0A810PZM2	727.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0074372_28	1347392.CCEZ01000005_gene1236	275.0	0	N/A	N/A
Pfam	UHGV-0074372_28	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0074372_28	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0074372_29	UniRef90_A0A6B9SU02	81.6	0.00000000000000117	Fibronectin autolysin	N/A
structural_annotation	UHGV-0074372_29	PF06810	N/A	N/A	N/A	N/A
Pfam	UHGV-0074372_30	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-0074372_32	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_33	phrog_5	72.5	7.5e-21	tail completion or Neck1 protein	connector
UniRef90	UHGV-0074372_33	UniRef90_A0A4D7AJK9	189.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0074372_33	764299.STRIC_1434	103.0	1.91e-26	N/A	N/A
Pfam	UHGV-0074372_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0074372_33	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_35	phrog_115	114.4	9e-34	minor head protein	head and packaging
UniRef90	UHGV-0074372_35	UniRef90_A0A810PSD3	584.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0074372_35	1111135.HMPREF1248_0663	188.0	0	cell adhesion	N/A
Pfam	UHGV-0074372_35	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0074372_35	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0074372_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074372_35	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0074372_36	phrog_64	164.6	0	portal protein	head and packaging
UniRef90	UHGV-0074372_36	UniRef90_UPI0018A8A301	597.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0074372_36	1235800.C819_02239	90.5	1.23e-16	phage portal protein, SPP1	N/A
Pfam	UHGV-0074372_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0074372_36	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0074372_37	K06909	128.3	7.6e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0074372_37	phrog_10250	180.4	0	N/A	unknown function
UniRef90	UHGV-0074372_37	UniRef90_A0A3D3Y0N9	676.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0074372_37	1226322.HMPREF1545_00043	561.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0074372_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0074372_37	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0074372_37	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0074372_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0074372_37	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0074372	Yes	22,952	55	57	1
UHGV-1518883	No	21,414	55	53	1