vOTU vOTU-036424

vOTU: vOTU-036424

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-036424
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00096 → vGENUS-02799 → vOTU-036424
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1528451
Biosample ID	SAMEA3541494
Genome length (bp)	27,574 bps
CheckV completeness	66.59% (Medium-quality)
CDS count	37
CDS density	87.15%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	43	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	52	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1528451_1	phrog_348	67.1	2.8e-19	minor head protein	head and packaging
eggNOG-mapper	UHGV-1528451_1	1123302.KB904182_gene67	138.0	1.65003e-41	N/A	N/A
structural_annotation	UHGV-1528451_1	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_2	phrog_132	93.3	1.8e-27	head-tail adaptor	connector
UniRef90	UHGV-1528451_2	UniRef90_A0A1I7JLB0	220.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1528451_2	1123302.KB904182_gene68	200.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1528451_2	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1528451_2	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_3	phrog_5279	70.3	1.8e-20	N/A	unknown function
UniRef90	UHGV-1528451_3	UniRef90_A0A447UCR4	92.0	9.15e-24	N/A	N/A
PHROG	UHGV-1528451_4	phrog_29	238.7	0	major head protein	head and packaging
UniRef90	UHGV-1528451_4	UniRef90_A0A4D6A5D1	662.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1528451_4	1123315.AUIP01000003_gene244	458.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1528451_4	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1528451_4	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_5	phrog_909	100.3	1.3e-29	major head protein	head and packaging
UniRef90	UHGV-1528451_5	UniRef90_A0A4D6ANB6	180.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1528451_5	1123302.KB904182_gene70	160.0	0	N/A	N/A
structural_annotation	UHGV-1528451_5	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_6	phrog_172	122.4	3.6e-36	head scaffolding protein	head and packaging
UniRef90	UHGV-1528451_6	UniRef90_A0A3L9DSR8	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-1528451_6	1123315.AUIP01000003_gene242	106.0	7.19e-26	N/A	N/A
Pfam	UHGV-1528451_6	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1528451_6	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_7	phrog_2841	339.0	0	minor head protein	head and packaging
UniRef90	UHGV-1528451_7	UniRef90_A0A4D6A5U5	881.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1528451_7	1123302.KB904182_gene74	444.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1528451_7	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1528451_7	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1528451_7	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1528451_7	PF04233,PF18812,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_8	phrog_64	437.2	0	portal protein	head and packaging
UniRef90	UHGV-1528451_8	UniRef90_A0A1I7JLS6	927.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1528451_8	1123302.KB904182_gene75	717.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1528451_8	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1528451_8	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1528451_8	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1528451_9	K06909	87.8	1.5e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1528451_9	phrog_2	76.4	5.9e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1528451_9	UniRef90_A0A1I7JLS5	929.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1528451_9	1123315.AUIP01000003_gene234	661.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1528451_9	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1528451_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1528451_9	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_10	phrog_309	171.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1528451_10	UniRef90_A0A3E2SH31	287.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1528451_10	413066.A1EAE0_9CAUD	179.0	0	endonuclease activity	N/A
structural_annotation	UHGV-1528451_10	PF07141	N/A	N/A	N/A	N/A
UniRef90	UHGV-1528451_11	UniRef90_A0A3E2SGY8	241.0	0	GIY-YIG nuclease family protein	N/A
COG	UHGV-1528451_11	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1528451_12	phrog_36	95.6	5.7e-28	transcriptional regulator	transcription regulation
UniRef90	UHGV-1528451_12	UniRef90_A0A1H7XRF7	258.0	0	Phage transcriptional activator, RinA family	N/A
eggNOG-mapper	UHGV-1528451_12	1069533.Sinf_0781	244.0	0	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1528451_12	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1528451_12	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_13	phrog_3745	103.2	8.1e-31	N/A	unknown function
UniRef90	UHGV-1528451_13	UniRef90_A0A447UCM2	142.0	4.89053e-43	Phage associated protein	N/A
structural_annotation	UHGV-1528451_14	PF20432,MF_00535,NF040507,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1528451_15	K01160	44.7	0.0000000000035	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1528451_15	phrog_140	103.1	2.8e-30	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1528451_15	UniRef90_A0A3E2SGY5	266.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1528451_15	1123302.KB904182_gene84	234.0	0	crossover junction endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1528451_15	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1528451_15	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1528451_15	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_16	phrog_121	105.3	5.6e-31	N/A	unknown function
UniRef90	UHGV-1528451_16	UniRef90_UPI000735A58E	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-1528451_16	1123315.AUIP01000003_gene225	93.6	6.97e-22	N/A	N/A
Pfam	UHGV-1528451_16	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1528451_16	PF07852	N/A	N/A	N/A	N/A
KOfam	UHGV-1528451_17	K07505	453.1	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1528451_17	phrog_2597	1246.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1528451_17	UniRef90_A0A3E2SGZ1	1532.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1528451_17	1123302.KB904182_gene86	1249.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1528451_17	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1528451_17	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1528451_17	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1528451_17	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1528451_18	K17677	382.9	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1528451_18	phrog_16	285.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1528451_18	UniRef90_A0A1S5WA97	957.0	0	Putatitive DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1528451_18	1123304.AQYA01000037_gene198	801.0	0	helicase	N/A
PADLOC	UHGV-1528451_18	mREase_IV_00005	148.2	6.44597e-44	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1528451_18	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1528451_18	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1528451_18	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1528451_18	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_19	phrog_374	193.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1528451_19	UniRef90_A0A380IPI2	223.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-1528451_19	632245.CLP_1610	193.0	0	N/A	N/A
structural_annotation	UHGV-1528451_19	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_20	phrog_2698	230.0	0	N/A	unknown function
UniRef90	UHGV-1528451_20	UniRef90_A0A3S4JK96	346.0	0	N/A	N/A
eggNOG-mapper	UHGV-1528451_20	1123302.KB904182_gene88	280.0	0	N/A	N/A
structural_annotation	UHGV-1528451_20	PF17426,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_21	phrog_1029	298.1	0	N/A	unknown function
UniRef90	UHGV-1528451_21	UniRef90_A0A4U9XM62	299.0	0	N/A	N/A
eggNOG-mapper	UHGV-1528451_21	1123302.KB904182_gene89	321.0	0	N/A	N/A
structural_annotation	UHGV-1528451_21	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_22	phrog_997	157.9	0	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1528451_22	UniRef90_A0A116LMM6	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-1528451_22	1214217.ALNF01000014_gene1400	218.0	0	N/A	N/A
PHROG	UHGV-1528451_23	phrog_124	270.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1528451_23	UniRef90_A0A3S4I583	620.0	0	N/A	N/A
eggNOG-mapper	UHGV-1528451_23	1123304.AQYA01000037_gene196	550.0	0	AAA domain	N/A
Pfam	UHGV-1528451_23	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1528451_23	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_24	phrog_2486	123.4	7.4e-37	N/A	unknown function
UniRef90	UHGV-1528451_24	UniRef90_A0A116NZT0	92.0	5.46e-22	N/A	N/A
KOfam	UHGV-1528451_25	K03546	56.0	4.9e-16	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1528451_25	phrog_1499	523.2	0	N/A	unknown function
UniRef90	UHGV-1528451_25	UniRef90_A0A1S5WAV4	796.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1528451_25	1123315.AUIP01000003_gene213	678.0	0	AAA domain	N/A
Pfam	UHGV-1528451_25	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1528451_25	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1528451_25	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_26	phrog_5118	84.6	5.5e-25	N/A	unknown function
PHROG	UHGV-1528451_27	phrog_5666	128.8	1.1e-38	N/A	unknown function
UniRef90	UHGV-1528451_27	UniRef90_A0A2I1YI46	135.0	1.84e-39	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1528451_27	764299.STRIC_0083	79.3	4.02e-18	Transcriptional	N/A
COG	UHGV-1528451_27	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1528451_28	phrog_1022	40.5	0.000000000041	N/A	unknown function
PHROG	UHGV-1528451_29	phrog_904	148.3	9.80909e-45	excisionase	integration and excision
UniRef90	UHGV-1528451_29	UniRef90_A0A368UDS7	202.0	0	Excisionase	N/A
eggNOG-mapper	UHGV-1528451_29	1069533.Sinf_0769	194.0	0	N/A	N/A
structural_annotation	UHGV-1528451_29	PF20063	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_30	phrog_6996	113.8	6.8e-34	N/A	unknown function
PHROG	UHGV-1528451_31	phrog_6178	81.0	7.6e-24	N/A	unknown function
UniRef90	UHGV-1528451_32	UniRef90_A0A3E2SH08	143.0	2.158e-43	XRE family transcriptional regulator	N/A
Pfam	UHGV-1528451_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1528451_32	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1528451_33	K22299	47.5	0.00000000000041	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1528451_33	phrog_8	89.5	5.4e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-1528451_33	UniRef90_A0A6F9N1R5	202.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1528451_33	157924.Q7Y4M0_9CAUD	160.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-1528451_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1528451_33	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_34	phrog_10226	380.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1528451_34	365659.smi_1368	349.0	0	N/A	N/A
structural_annotation	UHGV-1528451_34	PF01878,COG4127	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_35	phrog_87	77.6	1.3e-22	metallo-protease	other
UniRef90	UHGV-1528451_35	UniRef90_A0A1C3SRC4	234.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1528451_35	173707.Q938N7_9CAUD	97.1	3.02e-24	Pfam:Peptidase_M78	N/A
Pfam	UHGV-1528451_35	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1528451_35	PF13058,MF_00745,NF003339,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1528451_36	phrog_7237	180.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1528451_36	706437.HMPREF0813_00094	60.1	0.0000000807	N/A	N/A
structural_annotation	UHGV-1528451_36	MF_00867	N/A	N/A	N/A	N/A
KOfam	UHGV-1528451_37	K14059	144.6	1.10002e-42	int; integrase	N/A
PHROG	UHGV-1528451_37	phrog_1	177.6	0	integrase	integration and excision
UniRef90	UHGV-1528451_37	UniRef90_A0A3E2SH17	751.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1528451_37	1069533.Sinf_0759	476.0	0	DNA integration	N/A
Pfam	UHGV-1528451_37	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1528451_37	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1528451_37	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1528451_37	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1528451	Yes	27,574	38	67	1
UHGV-0099808	No	19,908	38	49	1