vOTU vOTU-036576

vOTU: vOTU-036576

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-036576
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00027 → vSUBFAM-01408 → vOTU-036576
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0079526
Biosample ID	SAMEA2784505
Genome length (bp)	38,273 bps
CheckV completeness	75.05% (Medium-quality)
CDS count	56
CDS density	93.62%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	118	Host agreement	85.59
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0079526_2	K02335	370.3	0	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-0079526_2	phrog_17	334.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079526_2	UniRef90_A0A316P160	1430.0	0	DNA polymerase I (Fragment)	N/A
eggNOG-mapper	UHGV-0079526_2	1340829.S5Y5D9_9CAUD	379.0	0	DNA polymerase family A	N/A
PADLOC	UHGV-0079526_2	drt-cluster58	102.0	6.8e-30	DRT	DRT
Pfam	UHGV-0079526_2	PF03167	N/A	N/A	Uracil DNA glycosylase superfamily	UDG
Pfam	UHGV-0079526_2	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-0079526_2	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
structural_annotation	UHGV-0079526_2	PF00476,PF03167,PF01612,MF_04101,MF_01956,NF004397,COG0749,COG1573	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079526_3	UniRef90_G4L0Y7	57.0	0.00000000382	zf-trcl domain-containing protein	N/A
eggNOG-mapper	UHGV-0079526_3	693746.OBV_43580	57.0	0.000000000641	Probable zinc-ribbon domain	N/A
Pfam	UHGV-0079526_3	PF13451	N/A	N/A	Probable zinc-ribbon domain	zf-trcl
COG	UHGV-0079526_3	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
KOfam	UHGV-0079526_4	K16899	54.6	0.0000000000000015	addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]	N/A
PHROG	UHGV-0079526_4	phrog_1218	211.7	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079526_4	UniRef90_A0A5H2TJR6	298.0	0	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0079526_4	706587.Desti_3464	56.2	0.0000029	PD-(D/E)XK nuclease superfamily	N/A
Pfam	UHGV-0079526_4	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
COG	UHGV-0079526_4	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0079526_4	PF12705,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_5	phrog_124	91.9	7.8e-27	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079526_5	UniRef90_A0A1L6BY46	318.0	0	Nucleotide-binding protein	N/A
eggNOG-mapper	UHGV-0079526_5	357276.EL88_08510	60.5	0.000000109	AAA domain	N/A
Pfam	UHGV-0079526_5	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0079526_5	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-0079526_5	PF13479,MF_00350,TIGR01618,COG2874	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_6	phrog_3724	112.1	3.09995e-41	N/A	unknown function
Pfam	UHGV-0079526_6	PF05037	N/A	N/A	N/A	DUF669
Pfam	UHGV-0079526_6	PF02037	N/A	N/A	SAP domain	SAP
UniRef90	UHGV-0079526_7	UniRef90_A0A5H2TVW2	119.0	9.61e-33	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0079526_7	1235835.C814_01172	68.6	0.00000000000477	phosphatase activity	N/A
COG	UHGV-0079526_7	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
PHROG	UHGV-0079526_8	phrog_1485	90.5	2.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0079526_8	1415774.U728_1099	77.8	2.98e-16	N/A	N/A
KOfam	UHGV-0079526_9	K14440	97.9	1.4013e-45	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0079526_9	phrog_62	305.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079526_9	UniRef90_A0A1L6BY27	367.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0079526_9	935948.KE386495_gene1203	184.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-0079526_9	ZorD1_00005	58.2	2.6e-22	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0079526_9	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0079526_9	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0079526_9	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0079526_9	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_12	phrog_33386	66.9	4.6e-20	N/A	unknown function
Pfam	UHGV-0079526_12	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
structural_annotation	UHGV-0079526_13	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079526_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_16	phrog_16490	125.6	6e-37	N/A	unknown function
eggNOG-mapper	UHGV-0079526_16	476272.RUMHYD_01770	123.0	6.79e-32	N/A	N/A
eggNOG-mapper	UHGV-0079526_17	658655.HMPREF0988_00918	52.8	0.0000000433	N/A	N/A
PHROG	UHGV-0079526_19	phrog_36	49.0	0.00000000000014	transcriptional regulator	transcription regulation
Pfam	UHGV-0079526_19	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0079526_19	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0079526_19	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0079526_19	PF04545,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0079526_22	K01448	63.0	5.1e-18	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0079526_22	phrog_435	93.7	2.6e-27	endolysin	lysis
UniRef90	UHGV-0079526_22	UniRef90_A0A810PUG7	392.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0079526_22	994573.T472_0211265	154.0	2.52234e-44	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0079526_22	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0079526_22	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0079526_22	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0079526_22	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_23	phrog_881	83.0	2e-24	holin	lysis
UniRef90	UHGV-0079526_23	UniRef90_A0A317M6V7	83.6	9.29e-20	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0079526_23	476272.RUMHYD_01966	75.1	4.43e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-0079526_23	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0079526_23	PF16938,COG3237	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_24	phrog_372	153.4	0	tail protein	tail
UniRef90	UHGV-0079526_24	UniRef90_A0A1C7G3H3	127.0	1.29e-27	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0079526_24	1235802.C823_05263	110.0	5.3e-23	N/A	N/A
Pfam	UHGV-0079526_24	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0079526_24	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0079526_24	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_25	phrog_1067	320.3	0	minor head protein	head and packaging
UniRef90	UHGV-0079526_25	UniRef90_A0A316NPB5	410.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0079526_25	1123263.AUKY01000068_gene489	299.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0079526_25	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-0079526_25	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0079526_25	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0079526_25	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0079526_25	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_26	phrog_33	71.9	1.6e-20	distal tail protein Dit	tail
UniRef90	UHGV-0079526_26	UniRef90_A0A173Z1X4	151.0	4.31039e-42	Phage-related protein	N/A
eggNOG-mapper	UHGV-0079526_26	1121342.AUCO01000004_gene648	123.0	5.56e-32	tail component	N/A
COG	UHGV-0079526_26	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0079526_26	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_27	phrog_1533	549.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0079526_27	UniRef90_A0A3E3ILY3	481.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0079526_27	1321782.HMPREF1986_01369	472.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0079526_27	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
Pfam	UHGV-0079526_27	PF04691	N/A	N/A	Apolipoprotein C-I (ApoC-1)	ApoC-I
NCBIFam	UHGV-0079526_27	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0079526_27	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0079526_27	PF10145,MF_04138,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_28	phrog_6541	54.7	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0079526_28	332101.JIBU02000023_gene4727	46.6	0.00000669	N/A	N/A
PHROG	UHGV-0079526_29	phrog_6280	131.1	5.5e-39	N/A	unknown function
UniRef90	UHGV-0079526_29	UniRef90_UPI001C0E35E9	112.0	4.69e-29	esterase	N/A
eggNOG-mapper	UHGV-0079526_29	445335.CBN_3078	108.0	1.57e-28	N/A	N/A
PHROG	UHGV-0079526_30	phrog_6686	107.7	6.1e-32	tail tube protein	tail
UniRef90	UHGV-0079526_30	UniRef90_A0A1C6KI12	137.0	1.62e-36	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0079526_30	871584.D9ZNE2_9CAUD	82.8	5.69e-17	N/A	N/A
structural_annotation	UHGV-0079526_30	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_31	phrog_7585	93.6	2.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0079526_31	1304880.JAGB01000002_gene2212	59.7	0.000000000675	N/A	N/A
structural_annotation	UHGV-0079526_31	PF05657,COG5003	N/A	N/A	N/A	N/A
UniRef90	UHGV-0079526_32	UniRef90_UPI00164BA869	75.9	0.00000000000000193	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0079526_32	580331.Thit_1383	80.9	3.27e-18	N/A	N/A
structural_annotation	UHGV-0079526_32	PF04883,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0079526_33	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_34	phrog_4020	56.2	6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0079526_34	1121342.AUCO01000012_gene1692	56.6	0.00000000204	N/A	N/A
structural_annotation	UHGV-0079526_35	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_36	phrog_29	251.7	0	major head protein	head and packaging
UniRef90	UHGV-0079526_36	UniRef90_UPI00082C04A5	430.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0079526_36	756499.Desde_1083	325.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0079526_36	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0079526_36	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_37	phrog_909	64.6	1.6e-18	major head protein	head and packaging
UniRef90	UHGV-0079526_37	UniRef90_UPI000DFA22F7	59.7	0.00000000804	head decoration protein	N/A
eggNOG-mapper	UHGV-0079526_37	1158612.I580_01911	86.7	3.63e-20	N/A	N/A
structural_annotation	UHGV-0079526_37	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_38	phrog_2303	108.4	7.7e-32	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0079526_38	986075.CathTA2_2461	76.3	0.0000000000000369	N/A	N/A
PHROG	UHGV-0079526_40	phrog_1657	202.6	0	head morphogenesis	head and packaging
UniRef90	UHGV-0079526_40	UniRef90_A0A1G9U003	221.0	0	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-0079526_40	536233.CLO_0535	273.0	0	N/A	N/A
structural_annotation	UHGV-0079526_40	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_42	phrog_13589	165.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0079526_42	428125.CLOLEP_01434	210.0	0	N/A	N/A
PHROG	UHGV-0079526_43	phrog_31538	40.3	0.000000000066	N/A	unknown function
structural_annotation	UHGV-0079526_44	PF08481,NF033814,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_45	phrog_64	128.7	3.2e-38	portal protein	head and packaging
UniRef90	UHGV-0079526_45	UniRef90_UPI0008331C88	451.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0079526_45	1121342.AUCO01000012_gene1700	147.0	4.22e-36	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0079526_45	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0079526_45	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0079526_46	K06909	331.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0079526_46	phrog_2	119.7	4.1e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0079526_46	UniRef90_UPI00101D64CF	583.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0079526_46	536232.CLM_2529	558.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0079526_46	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0079526_46	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0079526_46	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0079526_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0079526_46	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0079526_47	K07474	108.0	1.7e-31	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0079526_47	phrog_2606	112.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-0079526_47	UniRef90_A0A6H0TMZ4	135.0	1.62e-34	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0079526_47	552525.B5LPQ9_9CAUD	128.0	1.86e-32	Terminase small subunit	N/A
Pfam	UHGV-0079526_47	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-0079526_47	PF03592,PF06056,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0079526_49	phrog_6072	40.7	0.000000000026	N/A	unknown function
PHROG	UHGV-0079526_53	phrog_33402	56.7	1e-16	N/A	unknown function
KOfam	UHGV-0079526_54	K01493	137.5	1.3e-40	comEB; dCMP deaminase [EC:3.5.4.12]	N/A
PHROG	UHGV-0079526_54	phrog_174	144.4	3.50325e-43	dCMP deaminase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0079526_54	UniRef90_A0A101DYL2	130.0	1.13e-35	dCMP deaminase, putative	N/A
eggNOG-mapper	UHGV-0079526_54	224325.AF_1764	130.0	1.89e-36	PFAM CMP dCMP deaminase zinc-binding	N/A
PADLOC	UHGV-0079526_54	dCTPase	80.3	1.7e-33	N/A	N/A
Pfam	UHGV-0079526_54	PF00383	N/A	N/A	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
COG	UHGV-0079526_54	COG2131	N/A	N/A	Deoxycytidylate deaminase	N/A
structural_annotation	UHGV-0079526_54	PF00383,MF_00972,TIGR02571,COG2131	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0079526	Yes	38,273	46	75	1
UHGV-1541022	No	35,460	46	70	1