vOTU vOTU-041252

vOTU: vOTU-041252

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-041252
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00614 → vOTU-041252
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1971218
Biosample ID	SAMN03922483
Genome length (bp)	33,846 bps
CheckV completeness	78.13% (Medium-quality)
CDS count	62
CDS density	90.90%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	46	Host agreement	76.09
PHIST-predicted host lineage	Bacteria → Bacteroidota	Total connections	3	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1971218_1	UniRef90_UPI001F2474E7	51.2	0.000000193	GNAT family N-acetyltransferase	N/A
eggNOG-mapper	UHGV-1971218_1	1501391.LG35_01665	97.8	2.49e-25	Acetyltransferase (GNAT) domain	N/A
COG	UHGV-1971218_1	COG1670	N/A	N/A	Protein N-acetyltransferase, RimJ/RimL family	N/A
KOfam	UHGV-1971218_2	K01372	217.8	0	BLMH, pepC; bleomycin hydrolase [EC:3.4.22.40]	N/A
UniRef90	UHGV-1971218_2	UniRef90_R5WUF8	412.0	0	Aminopeptidase	N/A
eggNOG-mapper	UHGV-1971218_2	1501391.LG35_01670	411.0	0	Peptidase C1-like family	N/A
Pfam	UHGV-1971218_2	PF03051	N/A	N/A	Peptidase C1-like family	Peptidase_C1_2
COG	UHGV-1971218_2	COG3579	N/A	N/A	Aminopeptidase C	N/A
PHROG	UHGV-1971218_5	phrog_38832	63.3	1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1971218_5	665956.HMPREF1032_03087	52.4	0.00000402	N/A	N/A
PHROG	UHGV-1971218_7	phrog_22543	59.0	9.1e-17	N/A	unknown function
PHROG	UHGV-1971218_9	phrog_1934	132.6	1.5e-39	N/A	unknown function
UniRef90	UHGV-1971218_9	UniRef90_UPI0018AC0226	319.0	0	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-1971218_9	397290.C810_01488	163.0	0	zinc-finger-containing domain	N/A
Pfam	UHGV-1971218_9	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-1971218_9	PF11672	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_12	phrog_8684	99.6	2.5e-29	N/A	unknown function
UniRef90	UHGV-1971218_12	UniRef90_A0A1C6CH94	218.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-1971218_12	1226322.HMPREF1545_00036	86.7	1.23e-19	YopX protein	N/A
Pfam	UHGV-1971218_12	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1971218_12	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1971218_12	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-1971218_14	UniRef90_A0A8J6J3G6	134.0	7.02e-40	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1971218_14	1226322.HMPREF1545_00039	100.0	2.62e-27	sequence-specific DNA binding	N/A
Pfam	UHGV-1971218_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1971218_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1971218_14	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1971218_16	K22300	56.4	6.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1971218_16	phrog_1373	40.4	0.0000000000035	transcriptional regulator	transcription regulation
UniRef90	UHGV-1971218_16	UniRef90_A0A096DGF2	239.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1971218_16	742738.HMPREF9460_00887	239.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1971218_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1971218_16	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1971218_18	UniRef90_A0A8D9PDT2	165.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-1971218_18	1226322.HMPREF1545_00042	160.0	0	N/A	N/A
structural_annotation	UHGV-1971218_18	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-1971218_19	K06909	377.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1971218_19	phrog_5653	159.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1971218_19	UniRef90_A0A2U1BEH4	777.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1971218_19	33035.JPJF01000106_gene3136	474.0	0	Terminase small subunit	N/A
Pfam	UHGV-1971218_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1971218_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1971218_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1971218_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1971218_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_20	phrog_533	426.8	0	portal protein	head and packaging
UniRef90	UHGV-1971218_20	UniRef90_U2R2D2	907.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1971218_20	1226322.HMPREF1545_00044	907.0	0	N/A	N/A
Pfam	UHGV-1971218_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1971218_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_21	phrog_581	305.9	0	minor head protein	head and packaging
UniRef90	UHGV-1971218_21	UniRef90_U2SBR7	639.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1971218_21	1226322.HMPREF1545_00046	639.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1971218_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1971218_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1971218_21	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1971218_22	PF18152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1971218_23	1226322.HMPREF1545_00049	153.0	2.8026e-45	N/A	N/A
PHROG	UHGV-1971218_24	phrog_10	176.9	0	major head protein	head and packaging
UniRef90	UHGV-1971218_24	UniRef90_U2SBS0	615.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-1971218_24	1226322.HMPREF1545_00050	615.0	0	Phage capsid family	N/A
Pfam	UHGV-1971218_24	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1971218_24	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1971218_24	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1971218_24	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1971218_25	1226322.HMPREF1545_00051	209.0	0	N/A	N/A
PHROG	UHGV-1971218_26	phrog_541	113.7	9.5e-34	head-tail adaptor	connector
eggNOG-mapper	UHGV-1971218_26	642492.Clole_0822	73.6	0.00000000000000985	N/A	N/A
PHROG	UHGV-1971218_27	phrog_3366	117.6	7.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-1971218_27	1226322.HMPREF1545_00053	289.0	0	N/A	N/A
structural_annotation	UHGV-1971218_27	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_28	phrog_556	71.2	1.3e-20	minor head protein	head and packaging
UniRef90	UHGV-1971218_28	UniRef90_UPI00189F11C5	172.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1971218_28	1226322.HMPREF1545_00054	271.0	0	Minor capsid protein	N/A
Pfam	UHGV-1971218_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1971218_28	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_29	phrog_3266	50.9	0.000000000000024	tail completion	connector
eggNOG-mapper	UHGV-1971218_29	1226322.HMPREF1545_00055	276.0	0	N/A	N/A
structural_annotation	UHGV-1971218_29	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_30	phrog_3099	107.5	1.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-1971218_30	1226322.HMPREF1545_00056	343.0	0	N/A	N/A
structural_annotation	UHGV-1971218_30	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_31	phrog_11299	160.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1971218_31	1226322.HMPREF1545_00057	263.0	0	N/A	N/A
structural_annotation	UHGV-1971218_31	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_32	phrog_706	128.6	4.3e-38	N/A	unknown function
UniRef90	UHGV-1971218_32	UniRef90_UPI0018A0FACA	218.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1971218_32	1226322.HMPREF1545_00058	371.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1971218_32	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1971218_32	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_33	phrog_1535	314.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1971218_33	UniRef90_R6TDK7	351.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-1971218_33	1226322.HMPREF1545_00059	648.0	0	tape measure	N/A
COG	UHGV-1971218_33	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1971218_33	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_34	phrog_1194	57.0	3.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1971218_34	1226322.HMPREF1545_00060	227.0	0	N/A	N/A
structural_annotation	UHGV-1971218_34	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_35	phrog_32744	1037.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1971218_35	1232449.BAHV02000010_gene2725	119.0	2.56e-25	N/A	N/A
structural_annotation	UHGV-1971218_35	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_36	phrog_18794	43.6	0.0000000000031	N/A	unknown function
UniRef90	UHGV-1971218_36	UniRef90_A0A4D7AHL6	78.6	0.000000000000417	Collagen-like protein	N/A
eggNOG-mapper	UHGV-1971218_36	1226322.HMPREF1545_00064	92.8	3.4e-18	N/A	N/A
structural_annotation	UHGV-1971218_36	PF18459	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_37	phrog_4628	44.9	0.0000000000022	tail fiber assembly	tail
eggNOG-mapper	UHGV-1971218_37	1226322.HMPREF1545_00128	102.0	8.65e-27	N/A	N/A
PHROG	UHGV-1971218_38	phrog_2310	58.2	8.2e-17	N/A	unknown function
PHROG	UHGV-1971218_39	phrog_937	50.0	0.000000000000029	hemolysin	other
eggNOG-mapper	UHGV-1971218_39	445972.ANACOL_03381	117.0	7.49e-33	N/A	N/A
PHROG	UHGV-1971218_40	phrog_23092	147.8	2.66247e-44	N/A	unknown function
eggNOG-mapper	UHGV-1971218_40	1226322.HMPREF1545_02799	133.0	6.73e-39	N/A	N/A
PHROG	UHGV-1971218_41	phrog_355	58.8	8e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1971218_41	UniRef90_A0A3R6TX12	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-1971218_41	97138.C820_00250	133.0	4.13e-39	N/A	N/A
Pfam	UHGV-1971218_41	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1971218_41	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_42	phrog_13256	75.3	4.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1971218_42	1226322.HMPREF1545_00132	92.8	4.92e-24	N/A	N/A
KOfam	UHGV-1971218_43	K01447	110.3	2.3e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1971218_43	phrog_670	148.5	5.32493e-44	endolysin	lysis
UniRef90	UHGV-1971218_43	UniRef90_U2SBT6	421.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1971218_43	1226322.HMPREF1545_00070	421.0	0	Ami_2	N/A
Pfam	UHGV-1971218_43	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1971218_43	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1971218_43	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-1971218_44	UniRef90_U2R3E6	65.9	0.00000000000167	KORA domain-containing protein	N/A
structural_annotation	UHGV-1971218_44	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_45	phrog_7929	50.8	0.00000000000003	N/A	unknown function
UniRef90	UHGV-1971218_45	UniRef90_UPI001D013B08	288.0	0	NYN domain-containing protein	N/A
eggNOG-mapper	UHGV-1971218_45	663278.Ethha_1443	227.0	0	NYN domain	N/A
Pfam	UHGV-1971218_45	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-1971218_45	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-1971218_45	PF01936,MF_04140,TIGR00288,COG1432	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_47	phrog_3754	86.1	2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1971218_47	1226322.HMPREF1545_00073	153.0	0	N/A	N/A
PHROG	UHGV-1971218_48	phrog_21718	117.8	7.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-1971218_48	397290.C810_05210	82.0	1.56e-17	N/A	N/A
PHROG	UHGV-1971218_49	phrog_22984	79.3	3.7e-23	N/A	unknown function
PHROG	UHGV-1971218_50	phrog_16490	128.8	6e-38	N/A	unknown function
eggNOG-mapper	UHGV-1971218_50	397290.C810_05212	68.9	0.0000000000846	N/A	N/A
PHROG	UHGV-1971218_51	phrog_20016	193.0	0	N/A	unknown function
UniRef90	UHGV-1971218_51	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1971218_51	1226322.HMPREF1545_00077	171.0	0	N/A	N/A
structural_annotation	UHGV-1971218_51	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1971218_52	phrog_28802	59.9	7.3e-17	N/A	unknown function
structural_annotation	UHGV-1971218_52	PF12510	N/A	N/A	N/A	N/A
UniRef90	UHGV-1971218_53	UniRef90_A0A7M1RRU0	68.9	0.0000000000222	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1971218_53	1378168.N510_03079	117.0	2.45e-30	N/A	N/A
eggNOG-mapper	UHGV-1971218_54	1226322.HMPREF1545_00079	68.6	0.0000000000000163	N/A	N/A
KOfam	UHGV-1971218_55	K14059	211.3	0	int; integrase	N/A
PHROG	UHGV-1971218_55	phrog_1	184.2	0	integrase	integration and excision
UniRef90	UHGV-1971218_55	UniRef90_U2QJL8	615.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1971218_55	1226322.HMPREF1545_00144	615.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1971218_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1971218_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1971218_55	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1971218_56	UniRef90_UPI001C0BFF51	60.8	0.000000000158	LITAF-like zinc ribbon domain-containing protein	N/A
structural_annotation	UHGV-1971218_56	TIGR04165,COG3478	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1971218_59	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1971218	Yes	33,846	51	78	1
UHGV-0134457	No	30,807	51	72	1
UHGV-1472457	No	30,807	51	72	1