vOTU vOTU-041534

vOTU: vOTU-041534

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-041534
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00368 → vGENUS-01241 → vOTU-041534
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1426419
Biosample ID	SAMEA2338667
Genome length (bp)	42,320 bps
CheckV completeness	68.94% (Medium-quality)
CDS count	60
CDS density	87.80%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	109	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → RUG115 → RUG115 sp900066395	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1426419_1	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_4	phrog_229	119.6	1.7e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-1426419_4	UniRef90_R6C0D1	242.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1426419_4	665956.HMPREF1032_00660	104.0	4.16e-27	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1426419_4	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1426419_4	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1426419_4	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426419_6	318464.IO99_07375	80.5	3.65e-18	N/A	N/A
UniRef90	UHGV-1426419_8	UniRef90_UPI001D011ACB	145.0	2.43826e-43	zinc ribbon domain-containing protein	N/A
Pfam	UHGV-1426419_10	PF10122	N/A	N/A	N/A	Mu-like_Com
structural_annotation	UHGV-1426419_10	PF10122,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_11	phrog_21101	43.9	0.000000000002	N/A	unknown function
UniRef90	UHGV-1426419_11	UniRef90_N2B8W4	109.0	2.8e-29	N/A	N/A
eggNOG-mapper	UHGV-1426419_11	1410633.JHWR01000018_gene9	120.0	1.65e-34	N/A	N/A
Pfam	UHGV-1426419_11	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1426419_11	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426419_11	PF07866,COG4728	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_12	phrog_38	184.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1426419_12	UniRef90_A0A8D9PG33	518.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1426419_12	1232453.BAIF02000058_gene1623	500.0	0	TIGRFAM Phage	N/A
COG	UHGV-1426419_12	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426419_12	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_13	phrog_11237	110.6	1.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-1426419_13	476272.RUMHYD_01941	139.0	1.17e-40	N/A	N/A
PHROG	UHGV-1426419_14	phrog_64	186.8	0	portal protein	head and packaging
UniRef90	UHGV-1426419_14	UniRef90_UPI00156EA9F5	801.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1426419_14	1298920.KI911353_gene2663	223.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1426419_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1426419_14	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426419_15	UniRef90_A0A7C7EK05	92.4	6.27e-20	N/A	N/A
PHROG	UHGV-1426419_16	phrog_1328	114.4	6.5e-34	major head protein	head and packaging
UniRef90	UHGV-1426419_16	UniRef90_UPI001D096CC5	521.0	0	N/A	N/A
eggNOG-mapper	UHGV-1426419_16	665956.HMPREF1032_03619	206.0	0	N/A	N/A
Pfam	UHGV-1426419_16	PF17236	N/A	N/A	N/A	DUF5309
Pfam	UHGV-1426419_16	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1426419_16	PF17236,PF18316,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426419_17	UniRef90_A0A7C7ERG0	53.1	0.00000136	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1426419_17	397290.C810_01402	76.6	1.35e-16	N/A	N/A
Pfam	UHGV-1426419_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
PHROG	UHGV-1426419_18	phrog_355	57.8	1.9e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426419_18	UniRef90_UPI0018A09237	137.0	3.12001e-40	N/A	N/A
eggNOG-mapper	UHGV-1426419_18	397290.C810_05229	142.0	9.03838e-43	N/A	N/A
structural_annotation	UHGV-1426419_18	PF14359	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426419_20	1298920.KI911353_gene2656	92.8	3.54e-22	N/A	N/A
structural_annotation	UHGV-1426419_20	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426419_21	1232453.BAIF02000058_gene1631	231.0	0	N/A	N/A
AcrCatalog	UHGV-1426419_21	cluster_24841	181.0	0	NA	N/A
structural_annotation	UHGV-1426419_22	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_23	phrog_158	44.7	0.0000000000023	major tail protein	tail
UniRef90	UHGV-1426419_23	UniRef90_A0A3A6HES5	191.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1426419_23	1232453.BAIF02000058_gene1634	149.0	2.10195e-44	N/A	N/A
structural_annotation	UHGV-1426419_23	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_26	phrog_28918	206.2	0	N/A	unknown function
UniRef90	UHGV-1426419_26	UniRef90_R9KPG7	491.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_26	1298920.KI911353_gene2649	556.0	0	tape measure	N/A
COG	UHGV-1426419_26	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1426419_29	phrog_130	86.1	5.3e-25	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1426419_29	UniRef90_UPI000E119442	199.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_29	1151292.QEW_0652	184.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1426419_29	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1426419_29	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1426419_29	PF02498,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_30	phrog_1194	135.5	1.7e-40	N/A	unknown function
eggNOG-mapper	UHGV-1426419_30	997830.HMPREF1124_0608	99.4	2.11e-25	N/A	N/A
Pfam	UHGV-1426419_30	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1426419_30	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_31	phrog_6616	715.5	0	tail protein	tail
UniRef90	UHGV-1426419_31	UniRef90_A0A412RR71	478.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_31	476272.RUMHYD_01992	554.0	0	N/A	N/A
structural_annotation	UHGV-1426419_31	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_32	phrog_18444	47.6	0.00000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1426419_33	476272.RUMHYD_01994	76.3	0.000000000000186	N/A	N/A
eggNOG-mapper	UHGV-1426419_34	742733.HMPREF9469_01801	68.6	0.0000000000728	N/A	N/A
structural_annotation	UHGV-1426419_34	PF14600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426419_35	1235790.C805_00610	52.0	0.000000441	Phage integrase, N-terminal SAM-like domain	N/A
COG	UHGV-1426419_35	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1426419_36	PF10618,MF_01370	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426419_37	UniRef90_A0A011UAK9	46.6	0.00000989	Antitoxin	N/A
PHROG	UHGV-1426419_38	phrog_937	53.8	0.0000000000000036	hemolysin	other
eggNOG-mapper	UHGV-1426419_38	1298920.KI911353_gene2670	50.4	0.00000178	N/A	N/A
PHROG	UHGV-1426419_39	phrog_1129	87.8	6.2e-26	holin	lysis
UniRef90	UHGV-1426419_39	UniRef90_A0A412KF76	166.0	0	Holin	N/A
eggNOG-mapper	UHGV-1426419_39	1256908.HMPREF0373_00463	153.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1426419_39	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1426419_39	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1426419_40	K01185	159.2	0	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-1426419_40	phrog_7	183.1	0	endolysin	lysis
UniRef90	UHGV-1426419_40	UniRef90_A0A3R6HYB3	310.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1426419_40	397291.C804_01109	160.0	3.22299e-44	Phage lysozyme	N/A
Pfam	UHGV-1426419_40	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-1426419_40	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1426419_40	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
HAMAP	UHGV-1426419_40	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-1426419_40	PF01471,PF00959,MF_04110,COG3772,COG3409	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426419_41	1121296.JONJ01000001_gene1595	89.7	5.28e-22	N/A	N/A
KOfam	UHGV-1426419_42	K23779	54.0	0.0000000000000038	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-1426419_42	phrog_8	41.5	0.000000000028	transcriptional regulator	transcription regulation
UniRef90	UHGV-1426419_42	UniRef90_A0A417W8X2	74.3	3.86e-16	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1426419_42	411470.RUMGNA_00189	60.1	0.0000000000279	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-1426419_42	retron_type_VI_hth_cluster2_1	41.6	0.000000000036	N/A	Retron
Pfam	UHGV-1426419_42	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1426419_42	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_44	phrog_8	55.1	0.0000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1426419_44	UniRef90_A0A1Q9J746	136.0	1.02e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_44	665950.HMPREF1025_02562	79.3	5.82e-16	TRANSCRIPTIONal	N/A
COG	UHGV-1426419_44	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1426419_44	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_45	phrog_8	52.5	0.000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1426419_45	UniRef90_UPI001D00CAB4	71.2	0.00000000000000539	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_45	1219626.HMPREF1639_07265	63.9	0.00000000000174	sequence-specific DNA binding	N/A
Pfam	UHGV-1426419_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1426419_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1426419_45	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1426419_46	K07741	57.1	6.6e-16	antB; anti-repressor protein	N/A
PHROG	UHGV-1426419_46	phrog_373	120.0	2.3e-35	anti-repressor	transcription regulation
UniRef90	UHGV-1426419_46	UniRef90_A0A1Q9J883	427.0	0	Toxin Bro	N/A
eggNOG-mapper	UHGV-1426419_46	552396.HMPREF0863_00756	225.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-1426419_46	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1426419_46	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1426419_46	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-1426419_49	K08306	43.9	0.0000000000028	mltC; membrane-bound lytic murein transglycosylase C [EC:4.2.2.-]	N/A
PHROG	UHGV-1426419_49	phrog_19890	98.8	4.7e-29	N/A	unknown function
UniRef90	UHGV-1426419_49	UniRef90_UPI001C014972	201.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_49	397290.C810_01448	94.0	4.41e-22	lytic transglycosylase activity	N/A
Pfam	UHGV-1426419_49	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1426419_49	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1426419_49	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
KOfam	UHGV-1426419_50	K03111	53.4	0.0000000000000025	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1426419_50	phrog_26861	120.7	7.7e-36	N/A	unknown function
UniRef90	UHGV-1426419_50	UniRef90_G2T2G3	303.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1426419_50	622312.ROSEINA2194_00317	304.0	0	PFAM single-strand binding protein Primosomal replication protein n	N/A
Pfam	UHGV-1426419_50	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1426419_50	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1426419_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1426419_50	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1426419_51	K07699	65.6	7.4e-19	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
PHROG	UHGV-1426419_51	phrog_24603	87.7	9.7e-26	N/A	unknown function
UniRef90	UHGV-1426419_51	UniRef90_A0A2M8Z2V5	91.3	4.99e-21	Sporulation initiation factor Spo0A-like protein	N/A
eggNOG-mapper	UHGV-1426419_51	411470.RUMGNA_01611	73.6	0.00000000000000467	Sporulation initiation factor Spo0A C terminal	N/A
Pfam	UHGV-1426419_51	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-1426419_51	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
structural_annotation	UHGV-1426419_51	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-1426419_52	K19171	75.6	2.4e-22	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1426419_52	phrog_77	238.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426419_52	UniRef90_A0A1Q9J750	785.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_52	1294142.CINTURNW_1008	311.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1426419_52	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1426419_52	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1426419_52	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_53	phrog_10079	59.4	3e-35	N/A	unknown function
eggNOG-mapper	UHGV-1426419_53	621372.ACIH01000214_gene1012	107.0	6.59e-25	N/A	N/A
PHROG	UHGV-1426419_56	phrog_2164	94.9	3.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1426419_56	1232453.BAIF02000057_gene1135	74.3	0.000000000000936	N/A	N/A
PHROG	UHGV-1426419_57	phrog_2185	305.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426419_57	UniRef90_UPI00157154DF	497.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1426419_57	1232453.BAIF02000057_gene1136	458.0	0	N/A	N/A
structural_annotation	UHGV-1426419_57	NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1426419_58	K06940	49.7	0.000000000000068	N/A	N/A
PHROG	UHGV-1426419_58	phrog_32498	207.9	0	N/A	unknown function
UniRef90	UHGV-1426419_58	UniRef90_A0A3R6ASD4	233.0	0	YkgJ family cysteine cluster protein	N/A
eggNOG-mapper	UHGV-1426419_58	397290.C810_01479	149.0	1.26117e-44	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-1426419_58	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
structural_annotation	UHGV-1426419_58	PF03692	N/A	N/A	N/A	N/A
PHROG	UHGV-1426419_59	phrog_59	101.8	4.7e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426419_59	UniRef90_C0CR26	238.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1426419_59	767806.D7PQ37_9CAUD	92.8	3.68e-21	HNH endonuclease	N/A
PADLOC	UHGV-1426419_59	HEase_00016	83.4	5.6e-24	homing endonuclease	RM
Pfam	UHGV-1426419_59	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1426419_59	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1426419_59	PF13392,PF07463	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426419_60	1121098.HMPREF1534_01074	63.5	0.0000000000219	Metallo-beta-lactamase superfamily	N/A
COG	UHGV-1426419_60	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1426419	Yes	42,320	38	69	1
UHGV-0061691	No	42,320	38	69	1
UHGV-0144136	No	11,264	37	18	1