vOTU vOTU-041543

vOTU: vOTU-041543

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-041543
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01430 → vGENUS-08213 → vOTU-041543
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas phoceensis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0114541
Biosample ID	SAMEA37064668
Genome length (bp)	27,766 bps
CheckV completeness	79.07% (Medium-quality)
CDS count	52
CDS density	92.02%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas phoceensis	Total connections	194	Host agreement	97.94
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas phoceensis	Total connections	8	Host agreement	87.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0114541_1	511680.BUTYVIB_01634	114.0	6.67e-33	N/A	N/A
structural_annotation	UHGV-0114541_1	PF02701	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114541_2	UniRef90_UPI001BBA5CF0	84.0	3.49e-20	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0114541_2	1280698.AUJS01000007_gene1001	81.6	4.82e-20	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0114541_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0114541_2	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0114541_4	K18830	71.1	2.1e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0114541_4	phrog_4	51.8	0.00000000000002	transcriptional repressor	transcription regulation
UniRef90	UHGV-0114541_4	UniRef90_A0A4R4FGI2	153.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0114541_4	642492.Clole_0718	109.0	2.34e-29	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0114541_4	retron_type_VI_hth_cluster2_1	40.8	0.00000000005	N/A	Retron
Pfam	UHGV-0114541_4	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0114541_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0114541_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_5	phrog_28456	44.1	0.0000000000038	N/A	unknown function
PHROG	UHGV-0114541_6	phrog_585	99.0	4.5e-29	N/A	unknown function
UniRef90	UHGV-0114541_6	UniRef90_UPI001897C570	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114541_6	438780.D2KRD9_9CAUD	75.1	0.00000000000000226	N/A	N/A
Pfam	UHGV-0114541_6	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0114541_6	PF10711,TIGR03433,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114541_14	UniRef90_A0A894KJ06	117.0	5.95e-33	Type II secretory pathway component PulF-like protein	N/A
UniRef90	UHGV-0114541_15	UniRef90_A0A894K899	133.0	3.07e-39	Putative geraniol 8-hydroxylase	N/A
PHROG	UHGV-0114541_17	phrog_3584	229.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0114541_17	411902.CLOBOL_03891	345.0	0	N/A	N/A
structural_annotation	UHGV-0114541_17	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0114541_18	K03469	54.9	0.0000000000000017	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0114541_18	phrog_531	57.7	2.7e-16	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114541_18	UniRef90_A0A894KKE1	294.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0114541_18	697281.Mahau_1396	63.2	0.00000000137	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0114541_18	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0114541_18	COG0328	N/A	N/A	Ribonuclease HI	N/A
PHROG	UHGV-0114541_19	phrog_17690	92.1	3.6e-27	N/A	unknown function
KOfam	UHGV-0114541_20	K01356	44.8	0.0000000000028	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0114541_20	phrog_362	43.3	0.0000000000067	transcriptional repressor	transcription regulation
UniRef90	UHGV-0114541_20	UniRef90_A0A174J3W3	74.7	5.01e-16	LexA repressor	N/A
eggNOG-mapper	UHGV-0114541_20	545697.HMPREF0216_00360	53.5	0.0000000232	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0114541_20	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0114541_20	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0114541_20	PF01726,MF_00732,NF006812,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_21	phrog_10192	47.8	0.0000000000002	N/A	unknown function
PHROG	UHGV-0114541_22	phrog_16351	65.4	8.5e-20	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114541_22	UniRef90_UPI001D072F7E	85.5	8.55e-18	N/A	N/A
eggNOG-mapper	UHGV-0114541_22	742723.HMPREF9477_00922	68.6	0.000000000000362	N/A	N/A
eggNOG-mapper	UHGV-0114541_24	1298920.KI911353_gene2704	55.8	0.00000000179	N/A	N/A
PHROG	UHGV-0114541_26	phrog_15198	57.1	2.9e-26	N/A	unknown function
UniRef90	UHGV-0114541_26	UniRef90_UPI00046759AC	133.0	6.4e-38	N/A	N/A
eggNOG-mapper	UHGV-0114541_26	742723.HMPREF9477_00919	103.0	3.61e-26	N/A	N/A
KOfam	UHGV-0114541_27	K03744	138.2	8.00001e-41	lemA; LemA protein	N/A
PHROG	UHGV-0114541_27	phrog_1383	152.6	1.4013e-45	virion structural protein	head and packaging
UniRef90	UHGV-0114541_27	UniRef90_A0A6M5GAR0	288.0	0	LemA family protein	N/A
eggNOG-mapper	UHGV-0114541_27	742735.HMPREF9467_00879	283.0	0	LemA family	N/A
Pfam	UHGV-0114541_27	PF04011	N/A	N/A	LemA family	LemA
COG	UHGV-0114541_27	COG1704	N/A	N/A	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	N/A
structural_annotation	UHGV-0114541_27	PF04011,NF040966,COG1704	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_28	phrog_3886	263.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0114541_28	742740.HMPREF9474_02292	263.0	0	N/A	N/A
PHROG	UHGV-0114541_30	phrog_36	83.9	2e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0114541_30	UniRef90_A0A3A6C6E7	199.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0114541_30	97139.C824_05976	186.0	0	sigma factor activity	N/A
Pfam	UHGV-0114541_30	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0114541_30	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0114541_30	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_31	phrog_338	101.9	7.3e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114541_31	UniRef90_UPI00196116DA	210.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0114541_31	1280698.AUJS01000007_gene1032	201.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-0114541_31	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0114541_31	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0114541_31	PF01844	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_32	phrog_104	263.4	0	portal protein	head and packaging
UniRef90	UHGV-0114541_32	UniRef90_A0A1C5MKT6	646.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0114541_32	665950.HMPREF1025_02537	654.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0114541_32	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_33	phrog_2494	341.1	0	minor head protein	head and packaging
UniRef90	UHGV-0114541_33	UniRef90_A0A1C5MKJ0	380.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0114541_33	665950.HMPREF1025_02536	289.0	0	N/A	N/A
PHROG	UHGV-0114541_35	phrog_17688	344.5	0	N/A	unknown function
UniRef90	UHGV-0114541_35	UniRef90_A0A1C5Y909	741.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0114541_35	665950.HMPREF1025_02532	774.0	0	phage terminase, large subunit	N/A
COG	UHGV-0114541_35	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0114541_35	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_36	phrog_233	89.9	4.1e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0114541_36	UniRef90_UPI001961E2FD	121.0	2.11e-32	N/A	N/A
eggNOG-mapper	UHGV-0114541_36	665950.HMPREF1025_02531	128.0	9.52e-36	N/A	N/A
Pfam	UHGV-0114541_36	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0114541_36	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_37	phrog_32396	149.2	7.00649e-45	N/A	unknown function
UniRef90	UHGV-0114541_37	UniRef90_A0A1C5MLP2	486.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0114541_37	665950.HMPREF1025_02530	516.0	0	Phage capsid family	N/A
structural_annotation	UHGV-0114541_37	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_39	phrog_137	109.7	1.5e-32	head-tail adaptor Ad1	connector
UniRef90	UHGV-0114541_39	UniRef90_A0A1C5MM07	178.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-0114541_39	12390.Q77MV1_9CAUD	177.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0114541_39	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0114541_39	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_40	phrog_501	93.6	1.7e-27	head closure Hc1	connector
UniRef90	UHGV-0114541_40	UniRef90_A0A139QHM6	147.0	9.10844e-44	Phage-associated protein	N/A
eggNOG-mapper	UHGV-0114541_40	665950.HMPREF1025_02528	165.0	0	N/A	N/A
structural_annotation	UHGV-0114541_40	PF12206,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114541_41	908337.HMPREF9257_0534	50.1	0.000000325	N/A	N/A
PHROG	UHGV-0114541_42	phrog_123	53.0	0.0000000000000068	tail terminator	connector
eggNOG-mapper	UHGV-0114541_42	1280698.AUJS01000007_gene1043	137.0	8.55002e-41	N/A	N/A
structural_annotation	UHGV-0114541_42	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_43	phrog_117	175.8	0	major tail protein	tail
UniRef90	UHGV-0114541_43	UniRef90_UPI00156E6ACC	271.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0114541_43	665950.HMPREF1025_02525	275.0	0	domain, Protein	N/A
COG	UHGV-0114541_43	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114541_43	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_44	phrog_1526	96.4	1.8e-28	N/A	unknown function
UniRef90	UHGV-0114541_44	UniRef90_A0A380KP73	72.4	0.00000000000000718	N/A	N/A
eggNOG-mapper	UHGV-0114541_44	665950.HMPREF1025_02524	97.4	1.71e-25	N/A	N/A
PHROG	UHGV-0114541_45	phrog_1633	69.0	7.6e-20	N/A	unknown function
UniRef90	UHGV-0114541_45	UniRef90_UPI0006C2F0F2	86.7	3.37e-20	N/A	N/A
eggNOG-mapper	UHGV-0114541_45	665950.HMPREF1025_02523	84.7	3.32e-20	N/A	N/A
Pfam	UHGV-0114541_45	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0114541_45	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_46	phrog_6900	252.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0114541_46	UniRef90_A0A1C5Y9X6	515.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0114541_46	665950.HMPREF1025_02522	589.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0114541_46	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114541_46	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_47	phrog_33	45.1	0.0000000000022	distal tail protein Dit	tail
UniRef90	UHGV-0114541_47	UniRef90_UPI001F242491	273.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0114541_47	1280698.AUJS01000007_gene1048	251.0	0	N/A	N/A
structural_annotation	UHGV-0114541_47	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_48	phrog_538	193.2	0	minor tail protein	tail
UniRef90	UHGV-0114541_48	UniRef90_UPI001E30CCA1	300.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0114541_48	411468.CLOSCI_00276	283.0	0	N/A	N/A
Pfam	UHGV-0114541_48	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0114541_48	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_49	phrog_9994	187.1	0	N/A	unknown function
UniRef90	UHGV-0114541_49	UniRef90_A0A7K3I4P1	125.0	3.74e-31	H_lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-0114541_49	411468.CLOSCI_02412	100.0	4.32e-22	N/A	N/A
structural_annotation	UHGV-0114541_49	PF20747,PF16990	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_50	phrog_12931	94.8	6.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0114541_50	742723.HMPREF9477_00891	117.0	4.13e-32	N/A	N/A
structural_annotation	UHGV-0114541_50	PF17642	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_51	phrog_1382	42.4	0.0000000000072	N/A	unknown function
NCBIFam	UHGV-0114541_51	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0114541_51	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0114541_52	phrog_16164	214.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0114541_52	411470.RUMGNA_00122	237.0	0	N/A	N/A
structural_annotation	UHGV-0114541_52	PF10651,NF032891	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0114541	Yes	27,766	40	79	1
UHGV-2033231	No	10,676	39	31	1