vOTU vOTU-041592

vOTU: vOTU-041592

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-041592
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q fessum
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vGENUS-05835 → vOTU-041592
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q fessum
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2091138
Biosample ID	N/A
Genome length (bp)	27,277 bps
CheckV completeness	70.24% (Medium-quality)
CDS count	37
CDS density	90.56%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q fessum	Total connections	77	Host agreement	77.92
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q fessum	Total connections	35	Host agreement	91.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2091138_1	K17733	149.3	2.52234e-44	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-2091138_1	phrog_2649	140.7	1.40004e-41	endolysin	lysis
UniRef90	UHGV-2091138_1	UniRef90_A0A2T3FT45	356.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2091138_1	1235802.C823_01946	216.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
AcrCatalog	UHGV-2091138_1	cluster_9940	67.0	2.69e-16	NA	N/A
Pfam	UHGV-2091138_1	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-2091138_1	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-2091138_1	PF02557,MF_01924,NF007557,COG2173	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_2	phrog_1129	73.0	2.9e-21	holin	lysis
UniRef90	UHGV-2091138_2	UniRef90_A0A3R6U6I1	135.0	8.32e-40	Enolase	N/A
eggNOG-mapper	UHGV-2091138_2	411461.DORFOR_00721	106.0	3.67e-29	N/A	N/A
Pfam	UHGV-2091138_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2091138_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_3	phrog_4105	101.3	5.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-2091138_3	657322.FPR_27220	105.0	3.91e-28	N/A	N/A
PHROG	UHGV-2091138_4	phrog_1382	67.8	8.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-2091138_4	411902.CLOBOL_00118	70.5	5.68e-16	N/A	N/A
NCBIFam	UHGV-2091138_4	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-2091138_4	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_5	phrog_1382	51.0	0.000000000000015	N/A	unknown function
UniRef90	UHGV-2091138_5	UniRef90_A0A3E2UAD4	56.2	0.000000000648	ASCH domain-containing protein	N/A
NCBIFam	UHGV-2091138_5	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-2091138_5	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2091138_7	742740.HMPREF9474_03519	128.0	8.19e-33	ATPase involved in DNA repair	N/A
COG	UHGV-2091138_7	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-2091138_7	PF17994,MF_00813,NF038128,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2091138_8	742740.HMPREF9474_03518	187.0	0	N/A	N/A
PHROG	UHGV-2091138_9	phrog_18725	123.2	1.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-2091138_9	1298920.KI911353_gene4838	231.0	0	N/A	N/A
PHROG	UHGV-2091138_10	phrog_13879	417.9	0	N/A	unknown function
eggNOG-mapper	UHGV-2091138_10	742740.HMPREF9474_03516	921.0	0	N/A	N/A
structural_annotation	UHGV-2091138_10	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_11	phrog_1194	80.9	1.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-2091138_11	742740.HMPREF9474_03515	214.0	0	N/A	N/A
structural_annotation	UHGV-2091138_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_12	phrog_1535	356.1	0	tail length tape measure protein	tail
UniRef90	UHGV-2091138_12	UniRef90_A0A174WQ97	866.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-2091138_12	742740.HMPREF9474_03514	855.0	0	tape measure	N/A
COG	UHGV-2091138_12	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2091138_12	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_13	phrog_8300	86.1	3.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-2091138_13	742740.HMPREF9474_03512	124.0	5.75e-36	N/A	N/A
structural_annotation	UHGV-2091138_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_14	phrog_820	121.6	4.4e-36	major tail protein	tail
eggNOG-mapper	UHGV-2091138_14	483218.BACPEC_01149	184.0	0	domain, Protein	N/A
COG	UHGV-2091138_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2091138_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_15	phrog_2595	85.0	7.8e-25	head-tail connector protein	connector
UniRef90	UHGV-2091138_15	UniRef90_UPI001D068DAC	176.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2091138_15	742740.HMPREF9474_03510	166.0	0	N/A	N/A
Pfam	UHGV-2091138_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-2091138_15	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_16	phrog_556	62.0	8.9e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-2091138_16	742740.HMPREF9474_03509	210.0	0	N/A	N/A
PHROG	UHGV-2091138_17	phrog_8710	138.3	2.20004e-41	N/A	unknown function
eggNOG-mapper	UHGV-2091138_17	742740.HMPREF9474_03508	182.0	0	N/A	N/A
structural_annotation	UHGV-2091138_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_18	phrog_541	85.8	4.3e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-2091138_18	742740.HMPREF9474_03507	216.0	0	N/A	N/A
PHROG	UHGV-2091138_19	phrog_422	276.5	0	major head protein	head and packaging
UniRef90	UHGV-2091138_19	UniRef90_A0A3R6QST7	567.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2091138_19	663278.Ethha_1589	397.0	0	N/A	N/A
structural_annotation	UHGV-2091138_19	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_20	phrog_2303	142.8	2.29953e-42	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-2091138_20	483218.BACPEC_01156	205.0	0	N/A	N/A
KOfam	UHGV-2091138_21	K24213	87.5	1.1e-25	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-2091138_21	phrog_5073	107.9	9.3e-32	tail fiber protein	tail
UniRef90	UHGV-2091138_21	UniRef90_A0A1C5PND8	583.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-2091138_21	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-2091138_24	phrog_581	250.1	0	minor head protein	head and packaging
UniRef90	UHGV-2091138_24	UniRef90_A0A417GP81	701.0	0	ADPrib_exo_Tox domain-containing protein	N/A
eggNOG-mapper	UHGV-2091138_24	742740.HMPREF9474_03503	503.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2091138_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-2091138_24	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-2091138_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2091138_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_25	phrog_25639	112.4	1.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-2091138_25	742740.HMPREF9474_03502	105.0	1.35e-28	N/A	N/A
PHROG	UHGV-2091138_26	phrog_533	284.0	0	portal protein	head and packaging
UniRef90	UHGV-2091138_26	UniRef90_A0A3R6U7L6	1009.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-2091138_26	742740.HMPREF9474_03501	748.0	0	N/A	N/A
structural_annotation	UHGV-2091138_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2091138_27	K06909	94.5	1.6e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2091138_27	phrog_2	76.7	4.7e-22	terminase large subunit	head and packaging
UniRef90	UHGV-2091138_27	UniRef90_A0A3R6QNE9	931.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2091138_27	1304866.K413DRAFT_0811	789.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-2091138_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2091138_27	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-2091138_28	K07474	131.6	1e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2091138_28	phrog_51	149.4	1.82169e-44	terminase small subunit	head and packaging
UniRef90	UHGV-2091138_28	UniRef90_A0A416L200	298.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-2091138_28	1298920.KI911353_gene4857	211.0	0	Terminase small subunit	N/A
Pfam	UHGV-2091138_28	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2091138_28	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2091138_28	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_29	phrog_36	56.2	6.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2091138_29	UniRef90_A0A416G5Z3	268.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-2091138_29	742740.HMPREF9474_03497	148.0	3.64338e-44	N/A	N/A
structural_annotation	UHGV-2091138_29	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-2091138_31	K00558	218.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-2091138_31	phrog_116	256.9	0	DNA methyltransferase	other
UniRef90	UHGV-2091138_31	UniRef90_A0A3R6RTV6	1093.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-2091138_31	1235800.C819_02255	723.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-2091138_31	MTase_II_00020	102.9	1.6e-32	Type II methyltransferase	RM
Pfam	UHGV-2091138_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-2091138_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2091138_31	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-2091138_33	UniRef90_R7AG63	194.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-2091138_33	1410626.JHXB01000002_gene645	107.0	3.75e-29	Protein conserved in bacteria	N/A
Pfam	UHGV-2091138_33	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-2091138_33	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2091138_33	PF07866,COG4728	N/A	N/A	N/A	N/A
PHROG	UHGV-2091138_35	phrog_23707	72.7	5.6e-21	N/A	unknown function
UniRef90	UHGV-2091138_35	UniRef90_A0A3R6R1A2	140.0	3.75968e-42	Alanine racemase	N/A
eggNOG-mapper	UHGV-2091138_37	742740.HMPREF9474_04352	52.8	0.000000438	Replication initiation and membrane attachment	N/A
COG	UHGV-2091138_37	COG3935	N/A	N/A	DNA replication protein DnaD	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2091138	Yes	27,277	47	70	1
UHGV-2043293	No	17,661	48	45	1