vOTU vOTU-041883

vOTU: vOTU-041883

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-041883
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01347 → vGENUS-02881 → vOTU-041883
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900544705
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2104255
Biosample ID	N/A
Genome length (bp)	32,564 bps
CheckV completeness	75.91% (Medium-quality)
CDS count	50
CDS density	94.35%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900544705	Total connections	53	Host agreement	88.68
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-2104255_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2104255_1	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2104255_3	1232449.BAHV02000010_gene3216	60.5	0.00000017	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-2104255_3	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-2104255_3	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
KOfam	UHGV-2104255_5	K18830	76.7	4.1e-22	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-2104255_5	phrog_8	57.1	3.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2104255_5	UniRef90_A0A1Q6KH79	132.0	2.36e-37	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-2104255_5	445972.ANACOL_03315	125.0	1.04e-35	N/A	N/A
Pfam	UHGV-2104255_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2104255_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2104255_5	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_11	phrog_7566	90.2	1.4e-26	N/A	unknown function
UniRef90	UHGV-2104255_11	UniRef90_A0A3D5LSW4	59.7	0.000000000976	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-2104255_11	1507.HMPREF0262_00433	101.0	5.18e-27	N/A	N/A
KOfam	UHGV-2104255_14	K22300	47.1	0.00000000000051	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
Pfam	UHGV-2104255_14	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2104255_14	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
KOfam	UHGV-2104255_15	K00571	119.4	3.9e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2104255_15	phrog_67	105.7	2.7e-31	DNA methyltransferase	other
UniRef90	UHGV-2104255_15	UniRef90_A0A1C6E5W1	418.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-2104255_15	411468.CLOSCI_00299	374.0	0	DNA methylase	N/A
PADLOC	UHGV-2104255_15	MTase_II_00157	96.2	5.1e-28	Type II methyltransferase	RM
Pfam	UHGV-2104255_15	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2104255_15	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-2104255_15	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-2104255_16	K00558	142.7	1.4013e-45	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-2104255_16	phrog_363	233.1	0	DNA methyltransferase	other
UniRef90	UHGV-2104255_16	UniRef90_UPI00082E0CBC	365.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-2104255_16	608534.GCWU000341_02304	279.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-2104255_16	DruM2_00001	125.4	3.6e-37	DNA cytosine methylase	Druantia
Pfam	UHGV-2104255_16	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-2104255_16	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-2104255_16	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2104255_16	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_18	phrog_5781	82.7	4.5e-24	N/A	unknown function
UniRef90	UHGV-2104255_18	UniRef90_A0A2V2FSM6	123.0	1.69e-34	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-2104255_18	573061.Clocel_3558	93.6	1.86e-23	N/A	N/A
Pfam	UHGV-2104255_18	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-2104255_18	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-2104255_18	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_20	phrog_355	53.4	0.0000000000000039	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2104255_20	UniRef90_A0A415G5B2	146.0	1.05097e-43	N/A	N/A
eggNOG-mapper	UHGV-2104255_20	397290.C810_05229	142.0	1.3004e-42	N/A	N/A
structural_annotation	UHGV-2104255_20	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_24	phrog_2245	100.3	1.8e-29	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-2104255_24	293826.Amet_2596	89.4	2.3e-21	N/A	N/A
structural_annotation	UHGV-2104255_24	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_31	phrog_3584	130.9	7.7e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2104255_31	1226322.HMPREF1545_03841	148.0	3.08e-40	N/A	N/A
structural_annotation	UHGV-2104255_31	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_33	phrog_25567	50.3	0.000000000000033	N/A	unknown function
eggNOG-mapper	UHGV-2104255_33	1235798.C817_04600	59.3	0.000000000769	N/A	N/A
structural_annotation	UHGV-2104255_33	NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-2104255_34	UniRef90_UPI0013C3FC23	50.4	0.000000863	chromate transporter	N/A
eggNOG-mapper	UHGV-2104255_34	1304866.K413DRAFT_4686	83.6	1.27e-20	N/A	N/A
PHROG	UHGV-2104255_35	phrog_606	72.5	1.7e-21	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-2104255_35	1226322.HMPREF1545_03842	69.7	0.0000000000045	DNA-packaging protein gp3	N/A
Pfam	UHGV-2104255_35	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-2104255_35	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-2104255_36	K08135	49.3	0.000000000000023	COL15A; collagen type XV alpha	N/A
PHROG	UHGV-2104255_36	phrog_12105	74.4	8.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-2104255_36	1226322.HMPREF1545_03850	76.6	0.0000000000000837	N/A	N/A
Pfam	UHGV-2104255_36	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-2104255_37	phrog_937	52.9	0.0000000000000072	hemolysin	other
eggNOG-mapper	UHGV-2104255_37	1519439.JPJG01000023_gene533	57.8	0.0000000012	N/A	N/A
PHROG	UHGV-2104255_38	phrog_881	84.1	9.1e-25	holin	lysis
UniRef90	UHGV-2104255_38	UniRef90_A0A4Q7P349	113.0	1.02e-31	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-2104255_38	742740.HMPREF9474_02251	114.0	1.31e-32	Putative phage holin Dp-1	N/A
Pfam	UHGV-2104255_38	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-2104255_38	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_39	phrog_21357	92.9	2.5e-27	endolysin	lysis
UniRef90	UHGV-2104255_39	UniRef90_A0A6N7WM72	213.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-2104255_39	97139.C824_00684	217.0	0	lysozyme activity	N/A
Pfam	UHGV-2104255_39	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-2104255_39	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2104255_39	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-2104255_39	PF01471,PF10030,TIGR02594,NF038080,COG3409,COG3942	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2104255_40	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_42	phrog_35275	155.0	0	N/A	unknown function
eggNOG-mapper	UHGV-2104255_42	1226322.HMPREF1545_03846	132.0	1.61e-33	N/A	N/A
PHROG	UHGV-2104255_43	phrog_24113	84.6	8e-25	N/A	unknown function
eggNOG-mapper	UHGV-2104255_43	1226322.HMPREF1545_03847	67.0	0.00000000000346	N/A	N/A
structural_annotation	UHGV-2104255_43	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_44	phrog_371	122.9	2.7e-36	major head protein	head and packaging
UniRef90	UHGV-2104255_44	UniRef90_A0A8F2JBL2	247.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-2104255_44	1226322.HMPREF1545_03848	276.0	0	N/A	N/A
Pfam	UHGV-2104255_44	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-2104255_44	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_46	phrog_511	162.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-2104255_46	1519439.JPJG01000060_gene1903	278.0	0	N/A	N/A
structural_annotation	UHGV-2104255_46	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-2104255_47	K06909	220.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2104255_47	phrog_3717	206.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-2104255_47	UniRef90_A0A1Y3SC75	587.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2104255_47	1226322.HMPREF1545_03843	569.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-2104255_47	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-2104255_47	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2104255_47	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2104255_47	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2104255_48	phrog_156	208.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-2104255_48	1519439.JPJG01000060_gene1886	540.0	0	N/A	N/A
structural_annotation	UHGV-2104255_48	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2104255_49	1203606.HMPREF1526_02741	77.4	0.00000000000034	N/A	N/A
eggNOG-mapper	UHGV-2104255_50	1226322.HMPREF1545_00787	313.0	0	N/A	N/A
Pfam	UHGV-2104255_50	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-2104255_50	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2104255	Yes	32,564	58	76	1
UHGV-0109821	No	30,692	58	71	1