vOTU vOTU-041966

vOTU: vOTU-041966

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-041966
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00016 → vSUBFAM-00903 → vGENUS-05573 → vOTU-041966
Host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Mesosutterella
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2119631
Biosample ID	SAMEA3449170
Genome length (bp)	21,134 bps
CheckV completeness	52.17% (Medium-quality)
CDS count	33
CDS density	97.56%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Mesosutterella	Total connections	37	Host agreement	97.3
PHIST-predicted host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Mesosutterella	Total connections	41	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2119631_1	phrog_184	211.4	0	DNA circularization	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2119631_1	UniRef90_R7I967	578.0	0	DNA_circ_N domain-containing protein	N/A
eggNOG-mapper	UHGV-2119631_1	742821.HMPREF9464_01823	195.0	0	DNA circularisation protein N-terminus	N/A
Pfam	UHGV-2119631_1	PF07157	N/A	N/A	DNA circularisation protein N-terminus	DNA_circ_N
COG	UHGV-2119631_1	COG4228	N/A	N/A	Mu-like prophage DNA circulation protein	N/A
PHROG	UHGV-2119631_2	phrog_3981	298.3	0	tail length tape measure protein	tail
UniRef90	UHGV-2119631_2	UniRef90_A0A6L6YME8	266.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2119631_2	1122135.KB893169_gene2496	132.0	1.57e-30	phage tail tape measure protein	N/A
NCBIFam	UHGV-2119631_2	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2119631_2	COG5412	N/A	N/A	Phage-related protein	N/A
Pfam	UHGV-2119631_4	PF10109	N/A	N/A	Phage tail assembly chaperone proteins, E, or 41 or 14	Phage_TAC_7
PHROG	UHGV-2119631_5	phrog_185	112.4	2.4e-33	tail tube protein	tail
UniRef90	UHGV-2119631_5	UniRef90_A0A6L6YJW8	119.0	1.92e-32	Phage tail protein	N/A
eggNOG-mapper	UHGV-2119631_5	742821.HMPREF9464_01826	125.0	8.66e-36	Phage tail tube protein	N/A
Pfam	UHGV-2119631_5	PF10618	N/A	N/A	Phage tail tube protein	Tail_tube
structural_annotation	UHGV-2119631_5	PF10618,TIGR02241,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_6	phrog_165	646.7	0	tail sheath	tail
UniRef90	UHGV-2119631_6	UniRef90_R7I957	875.0	0	Mu tail sheath family protein	N/A
eggNOG-mapper	UHGV-2119631_6	742821.HMPREF9464_01827	488.0	0	tail sheath	N/A
Pfam	UHGV-2119631_6	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-2119631_6	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
COG	UHGV-2119631_6	COG4386	N/A	N/A	Mu-like prophage tail sheath protein gpL	N/A
structural_annotation	UHGV-2119631_6	PF10758,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_7	phrog_209	114.4	7.8e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-2119631_7	29486.NJ56_17665	65.5	0.000000000118	N/A	N/A
structural_annotation	UHGV-2119631_7	PF09646	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_8	phrog_879	172.4	0	tail completion or Neck1 protein	connector
UniRef90	UHGV-2119631_8	UniRef90_A0A7U6JN97	99.8	9.25e-24	Putative membrane protein	N/A
eggNOG-mapper	UHGV-2119631_8	1042876.PPS_1254	68.2	0.00000000000327	N/A	N/A
structural_annotation	UHGV-2119631_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_9	phrog_25	59.1	7.2e-17	head closure Hc1	connector
UniRef90	UHGV-2119631_9	UniRef90_A0A7Y1FS28	65.5	0.0000000000246	Phage head closure protein	N/A
eggNOG-mapper	UHGV-2119631_9	742821.HMPREF9464_01829	80.9	4.91e-18	Phage head-tail joining protein	N/A
Pfam	UHGV-2119631_9	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-2119631_9	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-2119631_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_10	phrog_40	66.2	3.8e-19	head-tail adaptor Ad1	connector
UniRef90	UHGV-2119631_10	UniRef90_A0A853IME7	63.9	0.0000000000558	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-2119631_10	742821.HMPREF9464_01830	142.0	1.74041e-42	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-2119631_10	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-2119631_10	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-2119631_10	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_12	phrog_10	216.1	0	major head protein	head and packaging
UniRef90	UHGV-2119631_12	UniRef90_A0A5B7ZMF6	482.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2119631_12	742821.HMPREF9464_01831	456.0	0	Phage capsid family	N/A
Pfam	UHGV-2119631_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2119631_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2119631_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2119631_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-2119631_13	K06904	164.2	0	N/A	N/A
PHROG	UHGV-2119631_13	phrog_80	162.7	0	head maturation protease	head and packaging
UniRef90	UHGV-2119631_13	UniRef90_A0A5B7ZLN2	223.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-2119631_13	742821.HMPREF9464_01832	208.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-2119631_13	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-2119631_13	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-2119631_13	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-2119631_13	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_14	phrog_12	280.1	0	portal protein	head and packaging
UniRef90	UHGV-2119631_14	UniRef90_A0A5B7ZK00	505.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2119631_14	742821.HMPREF9464_01833	528.0	0	Phage portal protein	N/A
Pfam	UHGV-2119631_14	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-2119631_14	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-2119631_14	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2119631_14	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_15	phrog_9	441.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-2119631_15	UniRef90_UPI0006710F9A	741.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-2119631_15	742821.HMPREF9464_01834	801.0	0	Terminase	N/A
Pfam	UHGV-2119631_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2119631_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2119631_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2119631_15	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_16	phrog_83	80.9	1.8e-23	terminase small subunit	head and packaging
UniRef90	UHGV-2119631_16	UniRef90_UPI000DE972B2	113.0	2.95e-29	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-2119631_16	1454004.AW11_02579	77.4	6.58e-16	phage terminase small subunit	N/A
Pfam	UHGV-2119631_16	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-2119631_16	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2119631_16	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2119631_19	PF06530,NF006930,COG1595	N/A	N/A	N/A	N/A
KOfam	UHGV-2119631_20	K01160	52.2	0.000000000000018	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2119631_20	phrog_140	104.8	8.3e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2119631_20	UniRef90_R7IL81	294.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-2119631_20	411470.RUMGNA_02196	92.8	3.7e-22	COG COG4570 Holliday junction resolvase	N/A
Pfam	UHGV-2119631_20	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2119631_20	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2119631_20	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_23	phrog_678	97.5	2.1e-28	replication initiation O-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2119631_23	UniRef90_A0A6J5PRC2	73.2	0.0000000000229	Helix-turn-helix domain containing protein	N/A
Pfam	UHGV-2119631_23	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-2119631_23	PF13730,MF_01819,TIGR01610,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-2119631_24	K01356	57.5	3.6e-16	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2119631_24	phrog_4	149.2	2.8026e-44	transcriptional repressor	transcription regulation
UniRef90	UHGV-2119631_24	UniRef90_UPI0012BC92CF	219.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2119631_24	762966.HMPREF9439_01015	216.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2119631_24	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
Pfam	UHGV-2119631_24	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-2119631_24	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-2119631_24	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-2119631_27	phrog_2324	130.2	8.8e-39	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2119631_27	UniRef90_UPI001C62BAB2	91.7	6.46e-19	ERF family protein	N/A
eggNOG-mapper	UHGV-2119631_27	1123276.KB893279_gene2211	89.7	7.48e-19	Erf family	N/A
Pfam	UHGV-2119631_27	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-2119631_27	PF04404,COG5055	N/A	N/A	N/A	N/A
KOfam	UHGV-2119631_28	K01143	67.6	2.4e-19	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	N/A
PHROG	UHGV-2119631_28	phrog_149	116.5	2.2e-34	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2119631_28	UniRef90_A0A415CGP2	219.0	0	Exonuclease	N/A
eggNOG-mapper	UHGV-2119631_28	382640.BT_0376	167.0	0	Exonuclease (EC 3.1.11.3) (P03697 of bacteriophage lambda)	N/A
Pfam	UHGV-2119631_28	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-2119631_28	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
structural_annotation	UHGV-2119631_28	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-2119631_30	K03111	153.8	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2119631_30	phrog_44	122.3	4.4e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2119631_30	UniRef90_A0A388SB36	184.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2119631_30	1203554.HMPREF1476_02173	135.0	1e-38	Single-strand binding protein family	N/A
Pfam	UHGV-2119631_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2119631_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2119631_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2119631_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2119631_30	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-2119631_33	K14059	130.1	3.2e-38	int; integrase	N/A
PHROG	UHGV-2119631_33	phrog_1	163.2	0	integrase	integration and excision
UniRef90	UHGV-2119631_33	UniRef90_F3QJ78	250.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-2119631_33	469610.HMPREF0189_01147	255.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2119631_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2119631_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2119631_33	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2119631	Yes	21,134	58	52	1
UHGV-0093601	No	15,329	57	37	1