vOTU vOTU-042142

vOTU: vOTU-042142

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042142
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 → vSUBFAM-02706 → vGENUS-15381 → vOTU-042142
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-557 → CAG-557 sp000435275
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0089576
Biosample ID	SAMEA3449180
Genome length (bp)	26,522 bps
CheckV completeness	75.84% (Medium-quality)
CDS count	32
CDS density	86.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-557 → CAG-557 sp000435275	Total connections	49	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.84)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0089576_3	phrog_620	159.7	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0089576_3	UniRef90_R6GQ75	355.0	0	Phage DNA methylase	N/A
eggNOG-mapper	UHGV-0089576_3	1154860.SAG0136_06270	165.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0089576_3	MTase_II_00015	97.0	3.5e-28	Type II methyltransferase	RM
Pfam	UHGV-0089576_3	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0089576_3	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0089576_3	PF02195,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_4	phrog_13321	52.3	0.0000000000000059	N/A	unknown function
UniRef90	UHGV-0089576_4	UniRef90_A0A316L5W6	421.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-0089576_4	748224.HMPREF9436_03343	400.0	0	DNA photolyase activity	N/A
COG	UHGV-0089576_4	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0089576_4	PF20903,MF_00660,NF033668,COG1180	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_5	phrog_13845	165.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0089576_5	1399942.U3PDR2_9CAUD	148.0	1.26117e-44	N/A	N/A
structural_annotation	UHGV-0089576_5	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_6	phrog_9	280.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0089576_6	UniRef90_UPI001F2E3C42	749.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0089576_6	1399942.U3PBG5_9CAUD	731.0	0	Phage Terminase	N/A
Pfam	UHGV-0089576_6	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0089576_6	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-0089576_6	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_7	phrog_12	205.6	0	portal protein	head and packaging
UniRef90	UHGV-0089576_7	UniRef90_UPI0009E8B747	455.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0089576_7	1414720.CBYM010000001_gene697	392.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0089576_7	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0089576_7	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0089576_7	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0089576_7	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_8	phrog_4936	115.3	1.10002e-42	transcriptional regulator	transcription regulation
UniRef90	UHGV-0089576_8	UniRef90_R6HCE3	178.0	0	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-0089576_8	572544.Ilyop_1031	94.4	1.81e-20	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0089576_8	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0089576_8	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0089576_8	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
KOfam	UHGV-0089576_9	K06904	87.2	2.9e-25	N/A	N/A
PHROG	UHGV-0089576_9	phrog_80	109.7	4.4e-32	head maturation protease	head and packaging
UniRef90	UHGV-0089576_9	UniRef90_R6GRF8	328.0	0	Phage prohead protease HK97 family	N/A
eggNOG-mapper	UHGV-0089576_9	1414720.CBYM010000002_gene573	205.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0089576_9	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0089576_9	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0089576_9	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0089576_9	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_10	phrog_10	203.5	0	major head protein	head and packaging
UniRef90	UHGV-0089576_10	UniRef90_UPI001961BFFE	286.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0089576_10	903814.ELI_1299	282.0	0	Phage capsid family	N/A
Pfam	UHGV-0089576_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0089576_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0089576_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0089576_10	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_11	phrog_12102	84.4	9.3e-25	N/A	unknown function
UniRef90	UHGV-0089576_11	UniRef90_UPI00058C5FBA	85.1	2.82e-20	head fiber protein	N/A
eggNOG-mapper	UHGV-0089576_11	1410653.JHVC01000011_gene986	89.7	6.65e-23	N/A	N/A
UniRef90	UHGV-0089576_12	UniRef90_UPI001BA8BAD6	116.0	7.24e-32	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0089576_12	1399942.U3PCS3_9CAUD	92.4	3.27e-23	N/A	N/A
NCBIFam	UHGV-0089576_12	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0089576_12	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_13	phrog_25	59.8	5.1e-17	head closure Hc1	connector
UniRef90	UHGV-0089576_13	UniRef90_A0A371ATA0	94.0	1.02e-22	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0089576_13	1262449.CP6013_1044	72.0	0.00000000000000894	Phage head-tail joining protein	N/A
Pfam	UHGV-0089576_13	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0089576_13	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0089576_13	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0089576_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_14	phrog_5	54.4	0.0000000000000033	tail completion or Neck1 protein	connector
UniRef90	UHGV-0089576_14	UniRef90_R6GE33	226.0	0	Phage protein HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0089576_14	1262449.CP6013_1045	50.4	0.00000434	Bacteriophage HK97-gp10, putative tail-component	N/A
NCBIFam	UHGV-0089576_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0089576_14	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_15	phrog_78	46.9	0.00000000000054	tail terminator	connector
eggNOG-mapper	UHGV-0089576_15	1399942.U3PDS3_9CAUD	48.1	0.00000574	N/A	N/A
PHROG	UHGV-0089576_16	phrog_88	96.5	2.9e-28	major tail protein	tail
UniRef90	UHGV-0089576_16	UniRef90_R6GFP9	318.0	0	Putative major tail protein	N/A
eggNOG-mapper	UHGV-0089576_16	1195236.CTER_5106	112.0	9.43e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0089576_16	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0089576_16	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0089576_16	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_17	phrog_2115	50.8	0.000000000000038	tail protein	tail
eggNOG-mapper	UHGV-0089576_17	1399942.U3PCS7_9CAUD	90.1	1.05e-21	N/A	N/A
structural_annotation	UHGV-0089576_17	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_19	phrog_2268	40.6	0.000000000043	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0089576_19	UniRef90_R6GJE0	166.0	0	Antitoxin	N/A
eggNOG-mapper	UHGV-0089576_19	610130.Closa_1754	103.0	6.76e-28	Antitoxin component of a toxin-antitoxin (TA) module	N/A
Pfam	UHGV-0089576_19	PF02604	N/A	N/A	Antitoxin Phd_YefM, type II toxin-antitoxin system	PhdYeFM_antitox
NCBIFam	UHGV-0089576_19	TIGR01552.1	N/A	N/A	type II toxin-antitoxin system prevent-host-death family antitoxin	N/A
COG	UHGV-0089576_19	COG2161	N/A	N/A	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	N/A
structural_annotation	UHGV-0089576_19	PF02604,TIGR01552,COG2161	N/A	N/A	N/A	N/A
KOfam	UHGV-0089576_20	K19092	60.6	4.5e-17	parE1_3_4; toxin ParE1/3/4	N/A
PHROG	UHGV-0089576_20	phrog_2455	71.9	8.3e-21	N/A	unknown function
UniRef90	UHGV-0089576_20	UniRef90_UPI0004272534	114.0	4.02e-31	type II toxin-antitoxin system RelE/ParE family toxin	N/A
eggNOG-mapper	UHGV-0089576_20	1280698.AUJS01000003_gene2577	100.0	1.96e-26	ParE toxin of type II toxin-antitoxin system, parDE	N/A
Pfam	UHGV-0089576_20	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
COG	UHGV-0089576_20	COG3668	N/A	N/A	Plasmid stabilization system protein ParE	N/A
structural_annotation	UHGV-0089576_20	PF05016,TIGR00053,COG3668	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_21	phrog_5493	213.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0089576_21	138119.DSY2176	246.0	0	tape measure	N/A
COG	UHGV-0089576_21	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0089576_21	PF20155,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_22	phrog_33	89.8	5.8e-26	distal tail protein Dit	tail
UniRef90	UHGV-0089576_22	UniRef90_UPI0005750BC7	203.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0089576_22	545697.HMPREF0216_00910	172.0	0	tail component	N/A
Pfam	UHGV-0089576_22	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0089576_22	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0089576_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0089576_22	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_23	phrog_1067	340.9	0	minor head protein	head and packaging
UniRef90	UHGV-0089576_23	UniRef90_A0A1M6KY09	269.0	0	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-0089576_23	1567011.A0A0A7RUI9_9VIRU	258.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0089576_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0089576_23	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0089576_23	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0089576_26	phrog_23008	74.5	1.1e-25	tail fiber protein	tail
eggNOG-mapper	UHGV-0089576_26	500637.PROVRUST_04953	76.3	0.0000000000111	Phage tail-collar fibre protein	N/A
Pfam	UHGV-0089576_26	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0089576_26	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
KOfam	UHGV-0089576_28	K01448	126.6	2.5e-37	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0089576_28	phrog_435	150.0	1.96182e-44	endolysin	lysis
UniRef90	UHGV-0089576_28	UniRef90_R6GHD8	372.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0089576_28	1408437.JNJN01000040_gene194	248.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0089576_28	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0089576_28	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0089576_28	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0089576_28	PF01520,PF18342,MF_00562,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0089576	Yes	26,522	39	76	1
UHGV-2162276	No	17,032	40	50	1