vOTU vOTU-042274

vOTU: vOTU-042274

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042274
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-02741 → vOTU-042274
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2204646
Biosample ID	N/A
Genome length (bp)	37,717 bps
CheckV completeness	89.40% (Medium-quality)
CDS count	68
CDS density	95.34%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	161	Host agreement	75.78
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp003539495	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-2204646_1	411471.SUBVAR_06929	144.0	7.48994e-41	ATPase involved in DNA repair	N/A
COG	UHGV-2204646_1	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-2204646_3	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_4	phrog_13879	226.9	0	N/A	unknown function
eggNOG-mapper	UHGV-2204646_4	693746.OBV_18210	369.0	0	N/A	N/A
structural_annotation	UHGV-2204646_4	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_5	phrog_1194	74.0	1.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-2204646_5	411902.CLOBOL_00125	120.0	3.38e-33	N/A	N/A
structural_annotation	UHGV-2204646_5	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_6	phrog_1535	114.2	0	tail length tape measure protein	tail
UniRef90	UHGV-2204646_6	UniRef90_A0A810PX76	217.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2204646_6	1235797.C816_04182	360.0	0	SLT domain	N/A
COG	UHGV-2204646_6	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_7	phrog_706	117.0	1.5e-34	N/A	unknown function
UniRef90	UHGV-2204646_7	UniRef90_A0A2U1BEN4	209.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-2204646_7	693746.OBV_18170	192.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2204646_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2204646_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_8	phrog_11299	66.1	6.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-2204646_8	693746.OBV_18160	132.0	1.24e-37	N/A	N/A
structural_annotation	UHGV-2204646_8	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_9	phrog_3099	86.9	2.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-2204646_9	693746.OBV_18150	232.0	0	N/A	N/A
structural_annotation	UHGV-2204646_9	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_10	phrog_3266	51.1	0.000000000000019	tail completion	connector
eggNOG-mapper	UHGV-2204646_10	1232443.BAIA02000078_gene24	172.0	0	N/A	N/A
structural_annotation	UHGV-2204646_10	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_11	phrog_556	74.8	1.1e-21	minor head protein	head and packaging
UniRef90	UHGV-2204646_11	UniRef90_UPI00195E1497	214.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2204646_11	1226322.HMPREF1545_00054	167.0	0	Minor capsid protein	N/A
Pfam	UHGV-2204646_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2204646_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_12	phrog_3366	105.1	5.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-2204646_12	1226322.HMPREF1545_00053	166.0	0	N/A	N/A
Pfam	UHGV-2204646_12	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-2204646_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_13	phrog_541	103.7	1.1e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-2204646_13	642492.Clole_0822	67.0	0.0000000000029	N/A	N/A
PHROG	UHGV-2204646_14	phrog_544	179.7	0	major head protein	head and packaging
UniRef90	UHGV-2204646_14	UniRef90_A0A810PZM2	706.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-2204646_14	1347392.CCEZ01000005_gene1236	278.0	0	N/A	N/A
Pfam	UHGV-2204646_14	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-2204646_14	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2204646_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_16	phrog_581	298.2	0	minor head protein	head and packaging
UniRef90	UHGV-2204646_16	UniRef90_A0A1C5N7V1	478.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-2204646_16	1226322.HMPREF1545_00046	369.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2204646_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2204646_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2204646_16	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_18	phrog_533	396.2	0	portal protein	head and packaging
UniRef90	UHGV-2204646_18	UniRef90_A0A1C5N775	595.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2204646_18	1226322.HMPREF1545_00044	545.0	0	N/A	N/A
Pfam	UHGV-2204646_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2204646_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2204646_19	K06909	113.8	2e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2204646_19	phrog_2	117.7	1.7e-34	terminase large subunit	head and packaging
UniRef90	UHGV-2204646_19	UniRef90_A0A3D3Y0N9	418.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2204646_19	1226322.HMPREF1545_00043	396.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-2204646_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-2204646_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2204646_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2204646_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-2204646_21	K07319	116.3	2.8e-34	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-2204646_21	phrog_498	431.2	0	DNA methyltransferase	other
UniRef90	UHGV-2204646_21	UniRef90_UPI001782D995	427.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-2204646_21	1423758.BN55_01455	421.0	0	DNA methylase	N/A
PADLOC	UHGV-2204646_21	MTase_II_00015	221.6	0	Type II methyltransferase	RM
Pfam	UHGV-2204646_21	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-2204646_21	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2204646_21	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-2204646_21	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2204646_22	742738.HMPREF9460_02503	90.5	1.95e-22	N/A	N/A
structural_annotation	UHGV-2204646_22	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_23	phrog_3377	136.0	1.7e-40	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2204646_23	UniRef90_A0A3Q9RLP4	135.0	1.96e-33	Deoxyuridine 5'-triphosphate nucleotidohydrolase family protein	N/A
eggNOG-mapper	UHGV-2204646_23	1540091.A0A0A0RNF3_9CAUD	110.0	5.45e-25	sequence-specific DNA binding transcription factor activity	N/A
Pfam	UHGV-2204646_23	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
PHROG	UHGV-2204646_26	phrog_1770	63.6	3.9e-18	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2204646_26	536233.CLO_1822	153.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-2204646_26	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-2204646_27	UniRef90_UPI0019D1E2CF	249.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-2204646_27	1410632.JHWW01000006_gene695	194.0	0	N/A	N/A
structural_annotation	UHGV-2204646_27	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_31	phrog_38832	44.3	0.000000000000004	N/A	unknown function
eggNOG-mapper	UHGV-2204646_31	665956.HMPREF1032_00143	63.9	0.000000000205	N/A	N/A
structural_annotation	UHGV-2204646_31	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_32	phrog_355	59.7	5.1e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2204646_32	UniRef90_A0A413FXK8	108.0	4.88e-29	N/A	N/A
eggNOG-mapper	UHGV-2204646_32	573061.Clocel_3558	78.6	1.17e-17	N/A	N/A
Pfam	UHGV-2204646_32	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-2204646_32	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-2204646_32	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_33	phrog_3136	59.7	1.4e-29	N/A	unknown function
UniRef90	UHGV-2204646_33	UniRef90_A0A3D0HBD2	80.9	9.49e-17	ASCH domain-containing protein	N/A
COG	UHGV-2204646_33	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-2204646_33	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-2204646_36	K00390	107.9	1.1e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-2204646_36	phrog_424	118.7	4.4e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2204646_36	UniRef90_UPI001D087498	427.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-2204646_36	1408437.JNJN01000032_gene2312	333.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-2204646_36	BrxP_00001	69.7	2.7e-20	BrxP	BREX
Pfam	UHGV-2204646_36	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-2204646_36	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-2204646_36	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_38	phrog_2149	75.0	1.2e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2204646_38	742740.HMPREF9474_03117	179.0	0	N/A	N/A
structural_annotation	UHGV-2204646_38	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_39	phrog_378	96.0	4.8e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2204646_39	UniRef90_UPI001E43F9BA	76.3	0.0000000000000133	N/A	N/A
eggNOG-mapper	UHGV-2204646_39	1423732.BALS01000134_gene393	60.8	0.00000000239	N/A	N/A
Pfam	UHGV-2204646_39	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-2204646_39	PF05037,NF004948	N/A	N/A	N/A	N/A
UniRef90	UHGV-2204646_40	UniRef90_A0A2Z4QA33	239.0	0	PD-(D/E)XK nuclease	N/A
eggNOG-mapper	UHGV-2204646_40	718252.FP2_01050	129.0	9.24e-35	N/A	N/A
structural_annotation	UHGV-2204646_40	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_41	phrog_124	114.5	9.6e-34	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2204646_41	UniRef90_A0A2Z4QBI4	388.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-2204646_41	445972.ANACOL_00146	223.0	0	AAA domain	N/A
Pfam	UHGV-2204646_41	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-2204646_41	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-2204646_41	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2204646_46	1235835.C814_03153	55.8	0.0000000018	N/A	N/A
structural_annotation	UHGV-2204646_46	PF09035,NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_47	phrog_18248	53.9	0.0000000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-2204646_47	UniRef90_A0A371AUE2	75.9	2.66e-16	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2204646_47	1449336.JQLO01000001_gene2237	64.3	0.00000000000215	Transcriptional regulator, Cro CI family	N/A
Pfam	UHGV-2204646_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2204646_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2204646_47	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2204646_48	K22299	40.6	0.000000000053	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-2204646_48	phrog_18248	56.4	3.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2204646_48	UniRef90_A0A1G7UMC4	67.8	0.00000000000134	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2204646_48	1589749.A0A0B5A036_9CAUD	67.0	0.0000000000137	sequence-specific DNA binding	N/A
Pfam	UHGV-2204646_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2204646_48	PF01381,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2204646_49	PF13601,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2204646_52	1298920.KI911353_gene413	137.0	1.58e-37	N/A	N/A
Pfam	UHGV-2204646_52	PF12773	N/A	N/A	Double zinc ribbon	DZR
Pfam	UHGV-2204646_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2204646_54	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2204646_54	PF12844	N/A	N/A	N/A	N/A
KOfam	UHGV-2204646_55	K14059	128.8	7.7e-38	int; integrase	N/A
PHROG	UHGV-2204646_55	phrog_1	148.9	4.34403e-44	integrase	integration and excision
UniRef90	UHGV-2204646_55	UniRef90_A0A810Q0Y2	409.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-2204646_55	693746.OBV_43340	362.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2204646_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2204646_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2204646_55	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2204646_56	1226322.HMPREF1545_00079	91.7	2.49e-22	N/A	N/A
structural_annotation	UHGV-2204646_57	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_58	phrog_20016	186.3	0	N/A	unknown function
UniRef90	UHGV-2204646_58	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-2204646_58	1226322.HMPREF1545_00077	164.0	0	N/A	N/A
structural_annotation	UHGV-2204646_58	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-2204646_59	phrog_16490	138.2	1.29998e-41	N/A	unknown function
eggNOG-mapper	UHGV-2204646_59	1408437.JNJN01000043_gene803	130.0	2.33e-34	N/A	N/A
PHROG	UHGV-2204646_60	phrog_22984	76.9	6.2e-23	N/A	unknown function
PHROG	UHGV-2204646_61	phrog_21718	86.9	1.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-2204646_61	397290.C810_05210	60.5	0.00000000333	N/A	N/A
PHROG	UHGV-2204646_62	phrog_3754	95.8	4.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-2204646_62	476272.RUMHYD_01764	156.0	0	N/A	N/A
UniRef90	UHGV-2204646_63	UniRef90_UPI00164AED9E	86.3	1.26e-19	helix-turn-helix domain-containing protein	N/A
COG	UHGV-2204646_63	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-2204646_63	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
Pfam	UHGV-2204646_64	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2204646_64	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
UniRef90	UHGV-2204646_66	UniRef90_A0A1C6JAI6	68.6	0.000000000000177	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-2204646_66	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-2204646_67	UniRef90_UPI00164EA432	223.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2204646_67	525254.HMPREF0072_1273	222.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-2204646_67	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2204646_67	NF033743	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2204646	Yes	37,717	53	89	1
UHGV-0139452	No	30,296	53	72	1
UHGV-1389952	No	30,296	53	72	1