vOTU vOTU-042532

vOTU: vOTU-042532

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042532
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-02647 → vSUBGEN-15988 → vOTU-042532
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0008757
Biosample ID	SAMEA4765888
Genome length (bp)	40,376 bps
CheckV completeness	100.00% (Complete)
CDS count	67
CDS density	90.11%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	476	Host agreement	98.53
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0008757_1	phrog_16490	197.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0008757_1	397290.C810_01328	129.0	1.4e-32	N/A	N/A
PHROG	UHGV-0008757_2	phrog_20016	197.3	0	N/A	unknown function
UniRef90	UHGV-0008757_2	UniRef90_A0A285PT46	214.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0008757_2	1226322.HMPREF1545_00077	182.0	0	N/A	N/A
structural_annotation	UHGV-0008757_2	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008757_3	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0008757_5	K14059	154.6	1.4013e-45	int; integrase	N/A
PHROG	UHGV-0008757_5	phrog_1	180.6	0	integrase	integration and excision
UniRef90	UHGV-0008757_5	UniRef90_A0A174D176	438.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0008757_5	411471.SUBVAR_05137	265.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0008757_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0008757_5	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0008757_5	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0008757_6	K22300	40.7	0.000000000043	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0008757_6	UniRef90_A0A6N7TLT0	330.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0008757_6	266265.Bxe_A3948	49.7	0.00000955	Helix-turn-helix domain	N/A
Pfam	UHGV-0008757_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0008757_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0008757_6	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008757_11	PF21715,NF008122,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_12	phrog_8	45.3	0.0000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0008757_12	UniRef90_UPI001C020D87	223.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0008757_12	198094.BA_3829	61.2	0.000000000316	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0008757_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0008757_12	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0008757_12	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0008757_13	K07729	40.9	0.00000000004	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0008757_13	phrog_8	42.3	0.000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0008757_13	UniRef90_UPI001C009F10	117.0	3.43e-33	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0008757_13	1268072.PSAB_01325	52.4	0.0000000397	Transcriptional regulator	N/A
Pfam	UHGV-0008757_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0008757_13	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0008757_13	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_14	phrog_7168	63.9	2.2e-18	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008757_14	UniRef90_UPI001CCCB47B	58.5	0.0000000495	GIY-YIG nuclease family protein	N/A
PADLOC	UHGV-0008757_14	HEase_00030	43.1	0.000000000013	homing endonuclease	RM
Pfam	UHGV-0008757_14	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
NCBIFam	UHGV-0008757_14	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-0008757_14	PF19835,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_15	phrog_463	206.5	0	anti-repressor	transcription regulation
UniRef90	UHGV-0008757_15	UniRef90_UPI00156FBCEE	267.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0008757_15	411490.ANACAC_00813	231.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0008757_15	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0008757_15	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0008757_15	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0008757_15	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008757_21	PF14120	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0008757_22	760568.Desku_0919	105.0	1.92e-25	N/A	N/A
structural_annotation	UHGV-0008757_22	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_24	phrog_561	108.2	8.1e-32	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008757_24	UniRef90_UPI0011C8A287	146.0	1.7e-40	recombinase RecT	N/A
eggNOG-mapper	UHGV-0008757_24	33035.JPJF01000071_gene4462	140.0	7.57e-39	N/A	N/A
structural_annotation	UHGV-0008757_24	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0008757_25	K03111	145.4	5.99756e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0008757_25	phrog_44	152.5	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008757_25	UniRef90_D4K451	213.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0008757_25	718252.FP2_06770	213.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0008757_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0008757_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0008757_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0008757_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0008757_25	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_26	phrog_19415	55.3	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-0008757_26	UniRef90_A0A844D5V0	197.0	0	DnaD domain protein	N/A
Pfam	UHGV-0008757_26	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0008757_26	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
structural_annotation	UHGV-0008757_26	PF19808,TIGR01446	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008757_27	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_28	phrog_2245	44.7	0.0000000000022	nucleoside triphosphate pyrophosphohydrolase	other
structural_annotation	UHGV-0008757_28	PF11998,COG5420	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0008757_30	445972.ANACOL_01819	102.0	5.9e-23	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0008757_30	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0008757_31	phrog_424	47.9	0.00000000000021	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0008757_31	693746.OBV_43240	226.0	0	N/A	N/A
COG	UHGV-0008757_31	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0008757_32	phrog_3136	108.9	2.2e-32	N/A	unknown function
UniRef90	UHGV-0008757_32	UniRef90_UPI001C26B029	226.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0008757_32	394503.Ccel_3165	51.6	0.00000765	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0008757_32	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0008757_32	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0008757_33	K01160	57.1	5.8e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0008757_33	phrog_34	58.9	1.1e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008757_33	UniRef90_A0A6N7TND6	219.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0008757_33	875454.BAEW01000002_gene491	134.0	4.96e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0008757_33	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0008757_33	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0008757_33	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008757_34	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0008757_35	UniRef90_UPI0018CC2891	120.0	9.07e-32	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0008757_35	1235790.C805_00037	109.0	2.95e-28	N/A	N/A
structural_annotation	UHGV-0008757_35	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-0008757_36	K06909	143.2	2.49992e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0008757_36	phrog_10250	175.3	0	N/A	unknown function
UniRef90	UHGV-0008757_36	UniRef90_A0A844D8I4	842.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0008757_36	411490.ANACAC_00783	495.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0008757_36	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0008757_36	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0008757_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0008757_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0008757_36	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_37	phrog_64	120.7	5.1e-36	portal protein	head and packaging
UniRef90	UHGV-0008757_37	UniRef90_A0A6N7TNT3	891.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0008757_37	642492.Clole_2764	83.2	0.0000000000000312	phage portal protein, SPP1	N/A
Pfam	UHGV-0008757_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0008757_37	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008757_38	PF08863,MF_01077	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_39	phrog_2468	81.7	1.3e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0008757_39	UniRef90_A0A6N7TLR7	627.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0008757_39	1504822.CCNO01000013_gene286	110.0	1.1e-23	cell adhesion	N/A
Pfam	UHGV-0008757_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0008757_39	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008757_39	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_41	phrog_8680	205.2	0	N/A	unknown function
UniRef90	UHGV-0008757_41	UniRef90_A0A6N7TNE8	438.0	0	N/A	N/A
eggNOG-mapper	UHGV-0008757_41	1423790.BN53_04265	181.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0008757_41	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0008757_41	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0008757_41	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_43	phrog_5	42.2	0.000000000019	tail completion or Neck1 protein	connector
UniRef90	UHGV-0008757_43	UniRef90_A0A6N7TNP6	266.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0008757_43	268407.PWYN_03010	66.6	0.00000000000639	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-0008757_43	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_47	phrog_544	141.9	4.19969e-42	major head protein	head and packaging
UniRef90	UHGV-0008757_47	UniRef90_R0BKA1	436.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0008757_47	476272.RUMHYD_01776	318.0	0	N/A	N/A
structural_annotation	UHGV-0008757_47	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_49	phrog_17977	43.3	0.0000000000055	N/A	unknown function
UniRef90	UHGV-0008757_49	UniRef90_A0A844DHJ8	125.0	8.58e-35	Phage head closure protein	N/A
structural_annotation	UHGV-0008757_49	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0008757_50	UniRef90_A0A415JI88	67.8	0.00000000000444	N/A	N/A
structural_annotation	UHGV-0008757_50	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_51	phrog_885	71.0	1.4e-20	major tail protein	tail
eggNOG-mapper	UHGV-0008757_51	1111121.HMPREF1247_0789	151.0	7.9874e-44	N/A	N/A
structural_annotation	UHGV-0008757_51	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_54	phrog_9959	78.6	4e-23	tail length tape measure protein	tail
UniRef90	UHGV-0008757_54	UniRef90_UPI001C038824	1107.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0008757_54	1492737.FEM08_12070	141.0	2.33e-32	tape measure	N/A
Pfam	UHGV-0008757_54	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0008757_54	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0008757_54	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0008757_54	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_55	phrog_3558	265.8	0	tail protein	tail
UniRef90	UHGV-0008757_55	UniRef90_UPI001C01D15B	818.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0008757_55	877414.ATWA01000019_gene2050	125.0	6.31e-27	Phage minor structural protein	N/A
Pfam	UHGV-0008757_55	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0008757_55	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0008757_55	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0008757_57	1111121.HMPREF1247_1241	98.6	4.89e-23	N/A	N/A
structural_annotation	UHGV-0008757_57	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_58	phrog_3279	46.5	0.00000000000048	tail fiber protein	tail
eggNOG-mapper	UHGV-0008757_58	935840.JAEQ01000036_gene3232	59.3	0.00000134	N/A	N/A
structural_annotation	UHGV-0008757_58	NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_60	phrog_28526	96.1	1.7e-28	N/A	unknown function
UniRef90	UHGV-0008757_60	UniRef90_A0A415D4T1	72.4	7.29e-16	N/A	N/A
eggNOG-mapper	UHGV-0008757_60	411462.DORLON_00769	75.9	5.17e-18	N/A	N/A
KOfam	UHGV-0008757_61	K07273	152.9	2.8026e-45	acm; lysozyme	N/A
PHROG	UHGV-0008757_61	phrog_291	108.3	8.5e-32	endolysin	lysis
UniRef90	UHGV-0008757_61	UniRef90_A0A564U0D3	409.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0008757_61	718252.FP2_04890	241.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0008757_61	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0008757_61	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0008757_61	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0008757_63	phrog_15303	83.4	2.1e-24	N/A	unknown function
PHROG	UHGV-0008757_65	phrog_3754	93.6	2.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0008757_65	1235790.C805_00054	106.0	5.11e-28	N/A	N/A
PHROG	UHGV-0008757_66	phrog_21718	88.5	8.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0008757_66	397290.C810_05210	75.9	0.00000000000000345	N/A	N/A
PHROG	UHGV-0008757_67	phrog_22984	55.4	7.1e-16	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0008757	Yes	40,376	56	100	1
UHGV-0008498	No	39,700	56	94	1
UHGV-0014780	No	38,710	56	92	1
UHGV-0026346	No	34,570	56	82	1
UHGV-0014926	No	24,620	54	58	1
UHGV-0018379	No	23,140	56	55	1