vOTU vOTU-042639

vOTU: vOTU-042639

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042639
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00095 → vSUBFAM-03938 → vGENUS-06250 → vSUBGEN-24964 → vOTU-042639
Host lineage	Bacteria → Cyanobacteria → Vampirovibrionia → Gastranaerophilales → Gastranaerophilaceae → UBA6984 → UBA6984 sp900550295
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0012149
Biosample ID	SAMEA4765516
Genome length (bp)	35,672 bps
CheckV completeness	100.00% (Complete)
CDS count	57
CDS density	90.20%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Cyanobacteria → Vampirovibrionia → Gastranaerophilales → Gastranaerophilaceae → UBA6984 → UBA6984 sp900550295	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0012149_4	phrog_15768	71.4	1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0012149_4	1158294.JOMI01000009_gene1122	83.6	9.14e-17	N/A	N/A
Pfam	UHGV-0012149_4	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0012149_8	phrog_4287	48.1	0.00000000000016	DNA ejection protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0012149_8	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0012149_9	PF11039,MF_02210,NF008072,COG1247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0012149_11	PF11134,MF_00923,NF000022,COG4257	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_12	phrog_270	45.7	0.00000000000095	replication initiation protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0012149_12	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0012149_12	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-0012149_13	PF12728,NF033787,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0012149_14	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_17	phrog_267	76.4	2.9e-22	major head protein	head and packaging
UniRef90	UHGV-0012149_17	UniRef90_A0A353QSS2	197.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0012149_17	1232428.CAVO010000021_gene803	127.0	3.81e-32	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0012149_17	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_20	phrog_332	87.9	6e-26	head-tail adaptor	connector
UniRef90	UHGV-0012149_20	UniRef90_R7LWV3	227.0	0	Portal protein	N/A
structural_annotation	UHGV-0012149_20	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_24	phrog_625	56.5	2.7e-16	N/A	unknown function
structural_annotation	UHGV-0012149_24	PF12961,MF_00684,COG4043	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_26	phrog_98	68.3	5.8e-20	N/A	unknown function
UniRef90	UHGV-0012149_26	UniRef90_UPI001F3CE393	59.7	0.0000000223	YopX family protein	N/A
Pfam	UHGV-0012149_26	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0012149_26	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
KOfam	UHGV-0012149_33	K01160	61.5	2.1e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0012149_33	phrog_34	60.5	3e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0012149_33	UniRef90_A0A2T0APF7	110.0	1.16e-28	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0012149_33	525919.Apre_0813	82.4	1.77e-18	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0012149_33	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0012149_33	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0012149_34	K00571	178.8	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0012149_34	phrog_67	150.4	0	DNA methyltransferase	other
UniRef90	UHGV-0012149_34	UniRef90_A0A8D9PAN6	297.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0012149_34	1122243.KB903771_gene1539	243.0	0	DNA methylase	N/A
PADLOC	UHGV-0012149_34	MTase_II_00157	166.5	0	Type II methyltransferase	RM
Pfam	UHGV-0012149_34	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0012149_34	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0012149_34	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0012149_35	K02314	268.9	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0012149_35	phrog_19	258.1	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0012149_35	UniRef90_A0A292SUW2	305.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0012149_35	1347392.CCEZ01000060_gene3289	179.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0012149_35	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0012149_35	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0012149_35	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0012149_35	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_36	phrog_2514	75.9	3.8e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0012149_36	397291.C804_01603	110.0	2.99e-26	DnaD domain protein	N/A
COG	UHGV-0012149_36	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0012149_36	PF10771,MF_01177,TIGR01610,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0012149_37	K03111	104.1	2.1e-30	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0012149_37	phrog_44	98.1	1.1e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0012149_37	UniRef90_R5SAB4	97.8	6.93e-24	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0012149_37	1140001.I571_02846	88.2	2.8e-20	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0012149_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0012149_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0012149_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0012149_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0012149_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_38	phrog_11717	138.6	2.59997e-41	N/A	unknown function
eggNOG-mapper	UHGV-0012149_38	508419.F8J181_9CAUD	136.0	1.21e-37	N/A	N/A
eggNOG-mapper	UHGV-0012149_44	439235.Dalk_5245	61.6	0.000000000631	N/A	N/A
PHROG	UHGV-0012149_46	phrog_6201	64.2	1.2e-18	N/A	unknown function
UniRef90	UHGV-0012149_46	UniRef90_A0A292QUL5	91.7	1.85e-19	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-0012149_46	1144672.F966_03630	60.1	0.0000000297	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0012149_46	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0012149_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0012149_46	PF00717,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0012149_47	929558.SMGD1_2056	117.0	3.23e-32	N/A	N/A
structural_annotation	UHGV-0012149_47	PF09499,COG4998	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_49	phrog_3064	88.3	6.5e-26	terminase	head and packaging
UniRef90	UHGV-0012149_49	UniRef90_A0A2I7QK24	109.0	8.77e-28	Coil containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0012149_49	1173749.S4TTT2_9CAUD	64.7	0.0000000000761	N/A	N/A
Pfam	UHGV-0012149_49	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-0012149_50	K06909	104.1	1.5e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0012149_50	phrog_3717	82.2	5e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0012149_50	UniRef90_A0A1Q6U4X6	540.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0012149_50	1267535.KB906767_gene2463	71.2	0.000000000142	phage Terminase large subunit	N/A
Pfam	UHGV-0012149_50	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0012149_50	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0012149_50	PF04466,PF17289,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0012149_52	phrog_5867	50.3	0.000000000000012	endolysin	lysis
UniRef90	UHGV-0012149_52	UniRef90_A0A327J4T5	201.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
Pfam	UHGV-0012149_52	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
structural_annotation	UHGV-0012149_52	PF01510,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0012149_54	NF008552	N/A	N/A	N/A	N/A
KOfam	UHGV-0012149_55	K04763	92.9	4.2e-27	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0012149_55	phrog_216	141.7	2.79979e-42	integrase	integration and excision
UniRef90	UHGV-0012149_55	UniRef90_A0A1Q6UEK1	170.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0012149_55	1462526.BN990_04499	156.0	2.8026e-45	Phage integrase family	N/A
Pfam	UHGV-0012149_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0012149_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0012149	Yes	35,672	33	100	1