vOTU vOTU-042792

vOTU: vOTU-042792

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042792
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00124 → vSUBFAM-00848 → vGENUS-00727 → vSUBGEN-35434 → vOTU-042792
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → UMGS973
Host range breadth	Genus
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0015609
Biosample ID	N/A
Genome length (bp)	42,316 bps
CheckV completeness	100.00% (Complete)
CDS count	71
CDS density	92.43%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → UMGS973	Total connections	58	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0015609_1	phrog_27197	64.3	2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0015609_1	445970.ALIPUT_01592	77.8	0.00000000000000221	DNA-templated transcription, initiation	N/A
COG	UHGV-0015609_1	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-0015609_2	phrog_72	69.9	3e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015609_2	UniRef90_A0A8D9PDS2	124.0	1.1e-32	NinB protein	N/A
eggNOG-mapper	UHGV-0015609_2	1507.HMPREF0262_00432	115.0	2.45e-30	N/A	N/A
structural_annotation	UHGV-0015609_2	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_4	phrog_25385	58.1	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0015609_4	411468.CLOSCI_00565	67.4	0.000000000000608	N/A	N/A
KOfam	UHGV-0015609_5	K03111	140.3	2.20004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0015609_5	phrog_44	130.7	1.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015609_5	UniRef90_A0A645FRU2	162.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015609_5	1321814.HMPREF9089_01469	158.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0015609_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0015609_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0015609_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0015609_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0015609_5	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_8	phrog_21026	43.4	0.000000000003	N/A	unknown function
PHROG	UHGV-0015609_9	phrog_419	100.5	2.1e-29	N/A	unknown function
UniRef90	UHGV-0015609_9	UniRef90_A0A4U9RIR3	124.0	3.44e-35	N/A	N/A
eggNOG-mapper	UHGV-0015609_9	476272.RUMHYD_03324	131.0	8.99e-39	N/A	N/A
structural_annotation	UHGV-0015609_9	PF14083	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015609_10	1443122.Z958_05695	63.9	0.0000000000353	N/A	N/A
Pfam	UHGV-0015609_13	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
PHROG	UHGV-0015609_14	phrog_1770	109.0	4.1e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015609_14	UniRef90_A0A7V9HWC2	100.0	3.82e-24	Crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0015609_14	1144932.ATTF01000015_gene1210	83.2	4.2e-18	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	N/A
COG	UHGV-0015609_14	COG0817	N/A	N/A	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	N/A
structural_annotation	UHGV-0015609_14	PF16921,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_16	phrog_36	53.3	0.0000000000000056	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0015609_16	PF05263,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015609_19	PF00181	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015609_20	PF13973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015609_21	PF09392	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015609_23	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_24	phrog_38	352.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0015609_24	UniRef90_A0A845QMQ7	591.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0015609_24	755731.Clo1100_2438	437.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0015609_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0015609_24	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0015609_24	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0015609_24	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0015609_24	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_26	phrog_156	104.2	1e-31	portal protein	head and packaging
eggNOG-mapper	UHGV-0015609_26	1232449.BAHV02000016_gene1822	395.0	0	N/A	N/A
structural_annotation	UHGV-0015609_26	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_28	phrog_267	106.2	3.5e-31	major head protein	head and packaging
UniRef90	UHGV-0015609_28	UniRef90_A0A4R3KBP0	155.0	2.43966e-42	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0015609_28	665956.HMPREF1032_03906	248.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0015609_28	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015609_29	PF07100,COG4288	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_31	phrog_3287	97.1	1.4e-28	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0015609_31	1232449.BAHV02000016_gene1816	280.0	0	N/A	N/A
structural_annotation	UHGV-0015609_31	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_32	phrog_21765	43.9	0.0000000000032	N/A	unknown function
eggNOG-mapper	UHGV-0015609_32	552398.HMPREF0866_01593	76.3	0.00000000000393	tail collar domain protein	N/A
COG	UHGV-0015609_32	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0015609_33	phrog_37900	53.4	2.9e-16	N/A	unknown function
UniRef90	UHGV-0015609_33	UniRef90_UPI001AB049E6	146.0	1.07e-36	N/A	N/A
eggNOG-mapper	UHGV-0015609_33	693746.OBV_22720	165.0	1.97583e-43	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0015609_33	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-0015609_33	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0015609_33	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0015609_33	PF19789,PF14686,TIGR04183,COG2512	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015609_34	PF05635,NF008911	N/A	N/A	N/A	N/A
KOfam	UHGV-0015609_35	K00986	125.4	6.4e-37	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0015609_35	phrog_1423	220.3	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015609_35	UniRef90_R6GXU6	330.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0015609_35	1410650.JHWL01000003_gene2820	258.0	0	Reverse transcriptase	N/A
PADLOC	UHGV-0015609_35	icity0040	91.9	1.1e-26	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0015609_35	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0015609_35	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0015609_35	PF00078,TIGR04416,COG3344	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0015609_37	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0015609_37	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015609_43	1131462.DCF50_p1798	165.0	3.76e-38	N/A	N/A
PHROG	UHGV-0015609_44	phrog_4105	81.5	7.6e-24	N/A	unknown function
UniRef90	UHGV-0015609_44	UniRef90_A0A8D9UHA9	71.6	0.0000000000000475	Holin protein	N/A
eggNOG-mapper	UHGV-0015609_44	428125.CLOLEP_01431	79.0	1.43e-17	N/A	N/A
PHROG	UHGV-0015609_45	phrog_443	53.9	0.0000000000000052	holin	lysis
UniRef90	UHGV-0015609_45	UniRef90_A0A1I1Y2T2	89.7	2.43e-22	Phage r1t holin	N/A
eggNOG-mapper	UHGV-0015609_45	1469948.JPNB01000002_gene3855	86.3	9.62e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0015609_45	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0015609_45	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0015609_46	K01448	110.6	1.9e-32	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0015609_46	phrog_435	166.9	0	endolysin	lysis
UniRef90	UHGV-0015609_46	UniRef90_B0MAM2	228.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0015609_46	411490.ANACAC_00597	228.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0015609_46	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0015609_46	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0015609_46	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015609_47	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_48	phrog_21718	46.4	0.00000000000065	N/A	unknown function
eggNOG-mapper	UHGV-0015609_48	476272.RUMHYD_01768	63.5	0.0000000000452	N/A	N/A
eggNOG-mapper	UHGV-0015609_50	397290.C810_01328	54.3	0.00000398	N/A	N/A
structural_annotation	UHGV-0015609_51	PF18573,NF033147	N/A	N/A	N/A	N/A
KOfam	UHGV-0015609_53	K14059	202.6	0	int; integrase	N/A
PHROG	UHGV-0015609_53	phrog_1	198.4	0	integrase	integration and excision
UniRef90	UHGV-0015609_53	UniRef90_A0A858BPV1	271.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0015609_53	397290.C810_00805	261.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0015609_53	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0015609_53	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0015609_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0015609_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0015609_53	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015609_54	1449050.JNLE01000003_gene3644	52.0	0.00000868	domain protein	N/A
COG	UHGV-0015609_54	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
PHROG	UHGV-0015609_56	phrog_8	50.9	0.000000000000036	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015609_56	UniRef90_UPI000BA57F70	74.3	0.0000000000000178	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0015609_56	642492.Clole_1825	68.2	0.000000000000626	sequence-specific DNA binding	N/A
COG	UHGV-0015609_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0015609_59	phrog_8	53.1	0.0000000000000079	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015609_59	UniRef90_V5XT77	64.3	0.0000000000121	Repressor protein	N/A
eggNOG-mapper	UHGV-0015609_59	1300150.EMQU_2529	64.3	0.00000000000202	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0015609_59	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0015609_59	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0015609_59	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_60	phrog_989	80.9	8e-24	N/A	unknown function
UniRef90	UHGV-0015609_60	UniRef90_Q8SBM7	73.9	2.83e-16	Gp27 protein	N/A
eggNOG-mapper	UHGV-0015609_60	1540257.JQMW01000013_gene708	70.5	0.00000000000000112	N/A	N/A
KOfam	UHGV-0015609_61	K08309	45.9	0.00000000000066	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0015609_61	phrog_19349	153.8	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0015609_61	UniRef90_UPI000DE563D6	139.0	3.66e-38	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0015609_61	1120746.CCNL01000011_gene1661	123.0	1.34e-32	lytic transglycosylase activity	N/A
Pfam	UHGV-0015609_61	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0015609_61	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0015609_61	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_64	phrog_2514	103.5	1.2e-30	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015609_64	UniRef90_A0A1C6HCT9	63.2	0.0000000348	Phage replisome organizer, putative, N-terminal region	N/A
eggNOG-mapper	UHGV-0015609_64	742733.HMPREF9469_01845	116.0	1.02e-28	N/A	N/A
structural_annotation	UHGV-0015609_64	PF09681,TIGR01714,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_65	phrog_9804	124.8	6.6e-37	N/A	unknown function
UniRef90	UHGV-0015609_65	UniRef90_A0A1C5T9U7	174.0	0	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0015609_65	585394.RHOM_14005	119.0	1.48e-31	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0015609_65	cluster_137185	108.0	3.47e-32	NA	N/A
Pfam	UHGV-0015609_65	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0015609_65	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_67	phrog_155	155.8	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015609_67	UniRef90_UPI001CF85C41	213.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0015609_67	201846.Q6JM07_9CAUD	177.0	0	ERF superfamily	N/A
Pfam	UHGV-0015609_67	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0015609_67	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_69	phrog_674	140.0	5.395e-43	N/A	unknown function
UniRef90	UHGV-0015609_69	UniRef90_A0A6N7XHF2	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0015609_69	1095750.HMPREF9970_1676	147.0	1.49e-40	N/A	N/A
Pfam	UHGV-0015609_69	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0015609_69	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0015609_70	phrog_7370	72.4	5.2e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015609_70	UniRef90_UPI001D07AE80	140.0	4.69996e-41	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0015609_70	358681.BBR47_35660	53.9	0.0000000903	HNH endonuclease	N/A
Pfam	UHGV-0015609_70	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0015609_70	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0015609_71	phrog_4433	84.2	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0015609_71	886882.PPSC2_p0363	103.0	2.32e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0015609_71	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0015609	Yes	42,316	42	100	1