vOTU vOTU-042814

vOTU: vOTU-042814

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042814
Number of genomes	9
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-05848 → vGENUS-13576 → vSUBGEN-21960 → vOTU-042814
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas_A → Selenomonas_A sp900769615
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0015968
Biosample ID	SAMEA4765909
Genome length (bp)	58,378 bps
CheckV completeness	100.00% (Complete)
CDS count	77
CDS density	92.84%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas_A → Selenomonas_A sp900769615	Total connections	75	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Selenomonadales → Selenomonadaceae → Selenomonas_A → Selenomonas_A sp900769615	Total connections	31	Host agreement	96.77

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0015968_1	PF00210,MF_01441,TIGR00754,COG2193	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015968_2	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_3	phrog_16490	64.6	3.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0015968_3	1408437.JNJN01000043_gene803	97.1	9.76e-22	N/A	N/A
PHROG	UHGV-0015968_5	phrog_2655	50.8	0.00000000000003	excisionase	integration and excision
UniRef90	UHGV-0015968_5	UniRef90_UPI001D052CFD	68.9	0.0000000000000504	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0015968_5	398512.JQKC01000005_gene5483	48.1	0.00000626	N/A	N/A
Pfam	UHGV-0015968_5	PF20038	N/A	N/A	Helix-turn-helix domain	HTH_59
structural_annotation	UHGV-0015968_5	PF20038,TIGR01764	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015968_7	UniRef90_A0A8H0WGG9	58.5	0.000000000313	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0015968_7	1105031.HMPREF1141_0644	53.9	0.00000000347	N/A	N/A
structural_annotation	UHGV-0015968_7	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_8	phrog_373	42.3	0.000000000013	anti-repressor	transcription regulation
UniRef90	UHGV-0015968_8	UniRef90_UPI0009F220B6	60.5	0.000000000254	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0015968_8	218284.CCDN010000001_gene838	72.4	0.0000000000000171	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0015968_8	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
COG	UHGV-0015968_8	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
UniRef90	UHGV-0015968_9	UniRef90_A0A1M2ZNM7	48.5	0.00000294	CopG family transcriptional regulator	N/A
Pfam	UHGV-0015968_9	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0015968_9	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0015968_10	K07741	47.0	0.00000000000047	antB; anti-repressor protein	N/A
PHROG	UHGV-0015968_10	phrog_7940	210.0	0	N/A	unknown function
UniRef90	UHGV-0015968_10	UniRef90_B1C7M5	236.0	0	BRO family, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0015968_10	445971.ANASTE_00727	236.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0015968_10	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0015968_10	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0015968_11	PF08281,MF_00245,NF001075,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_13	phrog_18996	47.8	0.00000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0015968_13	1273103.NM10_01746	128.0	1.15e-37	N/A	N/A
PHROG	UHGV-0015968_14	phrog_918	124.1	3.2e-37	N/A	unknown function
UniRef90	UHGV-0015968_14	UniRef90_UPI001D017B4D	139.0	2.72006e-41	N/A	N/A
eggNOG-mapper	UHGV-0015968_14	357809.Cphy_2966	118.0	8.82e-34	N/A	N/A
Pfam	UHGV-0015968_14	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0015968_14	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0015968_15	K07273	130.3	2.1e-38	acm; lysozyme	N/A
PHROG	UHGV-0015968_15	phrog_291	117.4	1.6e-34	endolysin	lysis
UniRef90	UHGV-0015968_15	UniRef90_A0A1H0P8Q4	291.0	0	Glycosyl hydrolases family 25	N/A
eggNOG-mapper	UHGV-0015968_15	1280706.AUJE01000010_gene684	282.0	0	Glycosyl hydrolase family 25	N/A
Pfam	UHGV-0015968_15	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0015968_15	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0015968_15	PF01183,NF008377,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_19	phrog_10691	1051.3	0	N/A	unknown function
UniRef90	UHGV-0015968_19	UniRef90_UPI0009DF25C8	2018.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0015968_19	1485543.JMME01000020_gene773	2018.0	0	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	N/A
Pfam	UHGV-0015968_19	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
Pfam	UHGV-0015968_19	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-0015968_19	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0015968_19	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0015968_19	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
UniRef90	UHGV-0015968_21	UniRef90_UPI00047F33D6	447.0	0	Hint domain-containing protein	N/A
eggNOG-mapper	UHGV-0015968_21	1485543.JMME01000020_gene776	447.0	0	N/A	N/A
Pfam	UHGV-0015968_21	PF05203	N/A	N/A	Hom_end-associated Hint	Hom_end_hint
NCBIFam	UHGV-0015968_21	TIGR01443.1	N/A	N/A	intein C-terminal splicing region	N/A
structural_annotation	UHGV-0015968_21	PF07591,NF038136,TIGR03017,COG4942	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015968_22	PF00765,MF_02210,NF007644,COG2153	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015968_23	883156.HMPREF9282_00569	215.0	0	N/A	N/A
structural_annotation	UHGV-0015968_23	PF11134,MF_03008,NF010237,TIGR04362,COG4257	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015968_24	PF05899,MF_01537,NF007875,COG3123	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_25	phrog_13890	41.7	0.000000000015	N/A	unknown function
UniRef90	UHGV-0015968_25	UniRef90_UPI000B499598	53.9	0.0000000353	Arc family DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015968_25	1235790.C805_00066	47.8	0.00000179	N/A	N/A
structural_annotation	UHGV-0015968_25	PF19807,NF010256,COG4453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015968_29	657322.FPR_21920	73.6	0.0000000000144	N/A	N/A
COG	UHGV-0015968_29	COG5563	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015968_30	1150626.PHAMO_80093	89.7	1.46e-16	extracellular polysaccharide biosynthetic process	N/A
COG	UHGV-0015968_30	COG3206	N/A	N/A	Exopolysaccharide export protein/domain GumC/Wzc1	N/A
structural_annotation	UHGV-0015968_30	NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_31	phrog_5417	78.7	6.6e-23	N/A	unknown function
UniRef90	UHGV-0015968_31	UniRef90_H8FY63	170.0	0	Putative BcepGomrgp18	N/A
eggNOG-mapper	UHGV-0015968_31	1459636.NTE_01434	65.1	0.0000000000498	N/A	N/A
structural_annotation	UHGV-0015968_31	PF12571	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015968_32	1232428.CAVO010000067_gene421	449.0	0	cellulase activity	N/A
COG	UHGV-0015968_32	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0015968_32	PF18001,PF01828,PF16389,MF_01905,NF010681,COG3401,COG3506	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015968_33	1485543.JMME01000020_gene785	221.0	0	N/A	N/A
structural_annotation	UHGV-0015968_33	PF20387	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015968_34	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_36	phrog_1328	156.2	0	major head protein	head and packaging
UniRef90	UHGV-0015968_36	UniRef90_UPI0004838F8E	494.0	0	N/A	N/A
eggNOG-mapper	UHGV-0015968_36	1485543.JMME01000020_gene788	494.0	0	N/A	N/A
Pfam	UHGV-0015968_36	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0015968_36	PF17236,MF_04133,NF033394,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015968_37	1232428.CAVO010000067_gene424	85.1	0.00000000000000224	N/A	N/A
PHROG	UHGV-0015968_39	phrog_1216	283.5	0	portal protein	head and packaging
UniRef90	UHGV-0015968_39	UniRef90_A0A0U1L376	545.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0015968_39	1485543.JMME01000020_gene791	949.0	0	Membrane	N/A
COG	UHGV-0015968_39	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0015968_39	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_40	phrog_5902	193.2	0	N/A	unknown function
UniRef90	UHGV-0015968_40	UniRef90_A0A414NWF6	1110.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0015968_40	1115515.EV102420_06_00290	615.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0015968_40	PF05204	N/A	N/A	Homing endonuclease	Hom_end
COG	UHGV-0015968_40	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0015968_40	PF04466,PF01079,PF20441,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_41	phrog_309	178.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0015968_41	UniRef90_A0A414NWE7	176.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0015968_41	742733.HMPREF9469_01828	161.0	0	transposase activity	N/A
Pfam	UHGV-0015968_41	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0015968_41	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0015968_41	PF07141	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015968_43	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_46	phrog_8514	55.8	9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0015968_46	629265.PMA4326_10045	52.8	0.00000125	N/A	N/A
KOfam	UHGV-0015968_47	K21919	95.4	5.8e-28	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0015968_47	phrog_923	114.7	4.1e-34	N/A	unknown function
Pfam	UHGV-0015968_47	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
structural_annotation	UHGV-0015968_47	PF13599,NF011744	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015968_48	PF11998,COG5420	N/A	N/A	N/A	N/A
KOfam	UHGV-0015968_50	K01160	47.6	0.00000000000044	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0015968_50	phrog_140	142.9	1.3004e-42	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015968_50	UniRef90_C9LU68	172.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0015968_50	864563.HMPREF9166_1267	176.0	0	crossover junction endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0015968_50	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0015968_50	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0015968_50	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0015968_55	K03111	139.1	4.60004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0015968_55	phrog_44	133.5	1.4e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015968_55	UniRef90_A0A6B4JHN5	146.0	1.48958e-42	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015968_55	536233.CLO_0510	146.0	2.49431e-43	Single-strand binding protein family	N/A
Pfam	UHGV-0015968_55	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0015968_55	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0015968_55	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0015968_55	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0015968_55	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_56	phrog_9804	75.1	9.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0015968_56	1280706.AUJE01000046_gene1152	131.0	4.82e-36	N/A	N/A
structural_annotation	UHGV-0015968_56	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_57	phrog_678	82.5	6.5e-24	replication initiation O-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015968_57	UniRef90_UPI0011C364A6	150.0	7.72003e-41	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0015968_57	742741.HMPREF9475_02794	114.0	1.88e-26	N/A	N/A
Pfam	UHGV-0015968_57	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0015968_57	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0015968_57	PF02082,MF_01819,NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_58	phrog_398	196.5	0	N/A	unknown function
UniRef90	UHGV-0015968_58	UniRef90_UPI000489F9F0	304.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0015968_58	1485543.JMME01000021_gene802	304.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0015968_58	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0015968_58	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_59	phrog_155	155.0	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015968_59	UniRef90_UPI0009F184EE	200.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0015968_59	386415.NT01CX_2192	163.0	0	ERF superfamily	N/A
Pfam	UHGV-0015968_59	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0015968_59	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_60	phrog_253	96.9	2.2e-28	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015968_60	UniRef90_UPI000488EA39	122.0	2.88e-32	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0015968_60	1485543.JMME01000021_gene804	119.0	6.57e-32	Siphovirus Gp157	N/A
Pfam	UHGV-0015968_60	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0015968_60	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_65	phrog_989	73.5	1.6e-21	N/A	unknown function
UniRef90	UHGV-0015968_65	UniRef90_A0A357Y2J0	63.5	0.00000000000361	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0015968_65	97138.C820_01834	47.8	0.00000107	N/A	N/A
structural_annotation	UHGV-0015968_65	PF11372	N/A	N/A	N/A	N/A
PHROG	UHGV-0015968_68	phrog_1760	152.5	1.4013e-45	anti-termination protein	transcription regulation
UniRef90	UHGV-0015968_68	UniRef90_A0A6I3SG68	190.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-0015968_68	1280706.AUJE01000003_gene2285	172.0	0	Phage regulatory protein	N/A
Pfam	UHGV-0015968_68	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-0015968_68	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0015968_68	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015968_70	UniRef90_UPI001EDE8FCE	83.6	1e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0015968_70	642492.Clole_2800	74.3	7.46e-17	N/A	N/A
Pfam	UHGV-0015968_70	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0015968_70	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0015968_71	K22299	57.3	3.5e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0015968_71	phrog_8	61.8	1.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015968_71	UniRef90_F2JK85	84.3	8.93e-18	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0015968_71	642492.Clole_2801	84.3	1.5e-18	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0015968_71	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0015968_71	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0015968_77	K14059	230.0	0	int; integrase	N/A
PHROG	UHGV-0015968_77	phrog_1	228.5	0	integrase	integration and excision
UniRef90	UHGV-0015968_77	UniRef90_A0A356ULL2	493.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0015968_77	1443122.Z958_08600	311.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0015968_77	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0015968_77	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0015968_77	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0015968_77	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0015968_77	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0015968	Yes	58,378	41	100	1
UHGV-0148798	No	38,308	42	62	1
UHGV-1489642	No	38,307	42	62	1
UHGV-1721754	No	26,681	43	42	1
UHGV-1827804	No	15,946	42	25	1
UHGV-1808117	No	15,779	42	25	1
UHGV-1808387	No	14,841	43	24	1
UHGV-1611809	No	13,290	42	21	1
UHGV-1705011	No	10,682	44	17	1