vOTU vOTU-042867

vOTU: vOTU-042867

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042867
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01513 → vGENUS-01525 → vSUBGEN-00871 → vOTU-042867
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → RUG472 → RUG472 sp900545265
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0016453
Biosample ID	SAMEA4766007
Genome length (bp)	32,509 bps
CheckV completeness	100.00% (Complete)
CDS count	54
CDS density	92.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → RUG472 → RUG472 sp900545265	Total connections	287	Host agreement	99.3
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0016453_2	K21471	71.6	1.9e-20	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0016453_2	phrog_329	49.6	0.0000000000000039	minor tail protein	tail
UniRef90	UHGV-0016453_2	UniRef90_A0A316PD96	85.5	1.12e-16	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0016453_2	1449353.JQMQ01000005_gene4103	65.5	0.00000000203	PFAM NLP P60 protein	N/A
Pfam	UHGV-0016453_2	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0016453_2	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0016453_2	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0016453_2	PF00877,PF18342,NF033742,NF041850,COG0791,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_3	phrog_1863	57.6	1.4e-16	N/A	unknown function
UniRef90	UHGV-0016453_3	UniRef90_UPI001F2EB35F	78.2	1.1e-16	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0016453_3	1235797.C816_02840	109.0	7.49e-30	N/A	N/A
UniRef90	UHGV-0016453_5	UniRef90_A0A354CP49	56.6	0.00000000488	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0016453_5	1408437.JNJN01000040_gene204	73.2	3.58e-16	N/A	N/A
structural_annotation	UHGV-0016453_5	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_8	phrog_18108	73.5	2.4e-21	N/A	unknown function
UniRef90	UHGV-0016453_8	UniRef90_UPI0018C3A07F	87.4	1.2e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0016453_8	1193128.A200_07674	68.2	0.0000000000166	N/A	N/A
AcrCatalog	UHGV-0016453_8	cluster_115962	63.9	0.000000000000016	NA	N/A
structural_annotation	UHGV-0016453_8	PF07443	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016453_9	397290.C810_01347	55.5	0.00000000124	N/A	N/A
structural_annotation	UHGV-0016453_9	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_11	phrog_12389	70.5	2.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0016453_11	693746.OBV_p-00550	72.0	0.00000000000035	N/A	N/A
KOfam	UHGV-0016453_12	K14059	124.8	1.2e-36	int; integrase	N/A
PHROG	UHGV-0016453_12	phrog_1	123.9	1.7e-36	integrase	integration and excision
UniRef90	UHGV-0016453_12	UniRef90_UPI00030B7B7C	319.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0016453_12	1007096.BAGW01000023_gene159	318.0	0	Phage integrase family	N/A
Pfam	UHGV-0016453_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0016453_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0016453_12	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-0016453_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0016453_14	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-0016453_16	K18830	70.8	2.9e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0016453_16	phrog_4	51.8	0.000000000000019	transcriptional repressor	transcription regulation
UniRef90	UHGV-0016453_16	UniRef90_UPI001A9C6895	128.0	9.13e-36	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0016453_16	903814.ELI_1263	118.0	1.14e-32	Helix-turn-helix domain	N/A
Pfam	UHGV-0016453_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0016453_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0016453_16	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0016453_17	K18830	68.5	1.4e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0016453_17	phrog_2967	60.6	2.4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0016453_17	UniRef90_R7BIH5	126.0	3.61e-35	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0016453_17	445972.ANACOL_03315	121.0	5.72e-34	N/A	N/A
Pfam	UHGV-0016453_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0016453_17	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0016453_17	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016453_21	PF05339,MF_00535,NF002773,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016453_25	UniRef90_UPI000C7BF263	80.5	5.45e-16	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0016453_25	445972.ANACOL_01825	93.2	1.38e-21	N/A	N/A
PHROG	UHGV-0016453_26	phrog_7566	85.3	5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0016453_26	483218.BACPEC_01171	77.4	4.11e-17	N/A	N/A
KOfam	UHGV-0016453_27	K03111	131.0	1.4e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0016453_27	phrog_44	124.0	9.6e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016453_27	UniRef90_A0A2N2A191	180.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0016453_27	1042163.BRLA_c031440	121.0	8.21e-34	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0016453_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0016453_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0016453_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0016453_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0016453_27	PF00436,MF_00984,NF006445,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_28	phrog_16304	61.1	2.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0016453_28	1105031.HMPREF1141_0552	57.8	0.0000000264	N/A	N/A
Pfam	UHGV-0016453_28	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0016453_30	phrog_2245	73.1	4.2e-21	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0016453_30	UniRef90_A0A1E7GWT5	49.7	0.00000864	MazG domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0016453_30	428127.EUBDOL_01514	52.4	0.000000147	N/A	N/A
structural_annotation	UHGV-0016453_30	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016453_32	UniRef90_A0A173SAG0	64.7	0.00000000000515	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0016453_32	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0016453_32	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0016453_32	PF05223,NF003262	N/A	N/A	N/A	N/A
KOfam	UHGV-0016453_37	K01491	148.7	1.4013e-45	folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]	N/A
PHROG	UHGV-0016453_37	phrog_7320	129.3	2.29999e-40	tetrahydrofolate dehydrogenase and cyclohydrolase	other
UniRef90	UHGV-0016453_37	UniRef90_A0A847PND7	132.0	1.06e-33	Bifunctional protein FolD	N/A
eggNOG-mapper	UHGV-0016453_37	1463864.JOGO01000016_gene4597	125.0	8.5e-32	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	N/A
Pfam	UHGV-0016453_37	PF02882	N/A	N/A	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain	THF_DHG_CYH_C
COG	UHGV-0016453_37	COG0190	N/A	N/A	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	N/A
structural_annotation	UHGV-0016453_37	PF02882,MF_01576,NF010769,COG0190	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_38	phrog_36	60.4	3.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0016453_38	UniRef90_A0A1C6LD55	70.5	0.00000000000088	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-0016453_38	1121335.Clst_0383	76.3	9.41e-16	N/A	N/A
structural_annotation	UHGV-0016453_38	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0016453_39	K07451	49.5	0.000000000000084	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0016453_39	phrog_119	86.3	3.7e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016453_39	UniRef90_A0A0D8IV26	124.0	2.11e-35	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0016453_39	1226322.HMPREF1545_00111	110.0	7.92e-31	HNH nucleases	N/A
Pfam	UHGV-0016453_39	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0016453_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0016453_39	TIGR02646	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_40	phrog_361	64.7	1.5e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0016453_40	UniRef90_A0A1C6H6I9	142.0	1.59005e-41	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0016453_40	1033744.CAEL01000029_gene1286	82.8	8.81e-19	Phage terminase, small subunit	N/A
Pfam	UHGV-0016453_40	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0016453_40	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_41	phrog_9	295.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0016453_41	UniRef90_A0A2V2GQ67	1007.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0016453_41	1226322.HMPREF1545_00113	909.0	0	Phage Terminase	N/A
Pfam	UHGV-0016453_41	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0016453_41	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0016453_41	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0016453_41	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_42	phrog_12	188.9	0	portal protein	head and packaging
UniRef90	UHGV-0016453_42	UniRef90_A0A0D8IVL0	572.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0016453_42	1226322.HMPREF1545_00114	487.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0016453_42	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0016453_42	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0016453_42	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0016453_42	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0016453_43	K06904	145.5	4.40008e-43	N/A	N/A
PHROG	UHGV-0016453_43	phrog_80	165.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0016453_43	UniRef90_U2SBX0	291.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-0016453_43	1226322.HMPREF1545_00115	291.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0016453_43	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0016453_43	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0016453_43	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0016453_43	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_44	phrog_10	221.7	0	major head protein	head and packaging
UniRef90	UHGV-0016453_44	UniRef90_A0A1C6H720	642.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0016453_44	1226322.HMPREF1545_00116	575.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0016453_44	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0016453_44	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0016453_44	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0016453_44	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_45	phrog_2550	81.9	4.1e-24	N/A	unknown function
UniRef90	UHGV-0016453_45	UniRef90_R5V091	80.5	6.61e-18	Phage related protein	N/A
eggNOG-mapper	UHGV-0016453_45	1226322.HMPREF1545_00117	93.6	7.54e-24	N/A	N/A
structural_annotation	UHGV-0016453_45	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_46	phrog_19734	79.5	4.7e-23	N/A	unknown function
UniRef90	UHGV-0016453_46	UniRef90_A0A3R6AW46	95.5	4.06e-23	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0016453_46	1235798.C817_04587	79.0	1.99e-17	N/A	N/A
structural_annotation	UHGV-0016453_46	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016453_47	1235798.C817_04588	80.1	4.7e-18	N/A	N/A
structural_annotation	UHGV-0016453_47	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_48	phrog_5	46.9	0.00000000000058	tail completion or Neck1 protein	connector
UniRef90	UHGV-0016453_48	UniRef90_R6UNR2	142.0	1.59e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0016453_48	908340.HMPREF9406_2573	142.0	2.65994e-41	N/A	N/A
structural_annotation	UHGV-0016453_48	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_49	phrog_88	94.2	1.2e-27	major tail protein	tail
NCBIFam	UHGV-0016453_49	TIGR01603.1	N/A	N/A	major tail protein	N/A
PHROG	UHGV-0016453_51	phrog_3981	78.1	1.5e-22	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0016453_51	720554.Clocl_3669	229.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0016453_51	COG5185	N/A	N/A	Chromosome segregation protein NDC80, interacts with SMC proteins	N/A
structural_annotation	UHGV-0016453_51	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_52	phrog_33	67.7	2.9e-19	distal tail protein Dit	tail
UniRef90	UHGV-0016453_52	UniRef90_A0A173Z1X4	187.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0016453_52	1123263.AUKY01000068_gene490	106.0	2.51e-25	tail component	N/A
COG	UHGV-0016453_52	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0016453_52	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_53	phrog_1067	207.9	0	minor head protein	head and packaging
UniRef90	UHGV-0016453_53	UniRef90_A0A1C6H6B4	344.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0016453_53	1123263.AUKY01000068_gene489	285.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0016453_53	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0016453_53	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0016453_53	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0016453_53	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0016453_54	phrog_372	161.9	0	tail protein	tail
UniRef90	UHGV-0016453_54	UniRef90_UPI00195FD9F2	99.8	3.7e-18	N/A	N/A
eggNOG-mapper	UHGV-0016453_54	658659.HMPREF0983_03294	125.0	3.62e-28	N/A	N/A
Pfam	UHGV-0016453_54	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0016453_54	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0016453_54	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0016453	Yes	32,509	53	100	1