vOTU vOTU-042921

vOTU: vOTU-042921

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042921
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00152 → vSUBFAM-01760 → vGENUS-14028 → vSUBGEN-23173 → vOTU-042921
Host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → UBA932 → Cryptobacteroides → Cryptobacteroides sp000432655
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0016973
Biosample ID	SAMEA4765554
Genome length (bp)	28,013 bps
CheckV completeness	100.00% (Complete)
CDS count	39
CDS density	94.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → UBA932 → Cryptobacteroides → Cryptobacteroides sp000432655	Total connections	40	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0016973_2	phrog_11226	107.9	2.7e-32	portal protein	head and packaging
UniRef90	UHGV-0016973_2	UniRef90_UPI0018AAB575	352.0	0	phage portal protein	N/A
Pfam	UHGV-0016973_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0016973_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0016973_2	PF04860,MF_04135,TIGR01540,COG5518	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016973_3	PF20459	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016973_4	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_5	phrog_25468	45.4	0.00000000000092	N/A	unknown function
KOfam	UHGV-0016973_7	K08640	50.3	0.000000000000056	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0016973_7	phrog_894	50.9	0.000000000000025	endolysin	lysis
UniRef90	UHGV-0016973_7	UniRef90_A0A1V5IXL1	150.0	1.12104e-44	Peptidase M15	N/A
eggNOG-mapper	UHGV-0016973_7	1443665.JACA01000065_gene3987	70.1	0.000000000000203	Peptidase M15	N/A
Pfam	UHGV-0016973_7	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0016973_7	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016973_7	PF08291,NF007557,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_8	phrog_26448	44.5	0.00000000000061	N/A	unknown function
eggNOG-mapper	UHGV-0016973_8	1122985.HMPREF1991_01566	67.8	0.00000000000648	N/A	N/A
Pfam	UHGV-0016973_8	PF20647	N/A	N/A	N/A	DUF6808
structural_annotation	UHGV-0016973_8	PF20647	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_9	phrog_5809	65.5	8.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0016973_9	402612.FP0804	68.2	0.0000000000000599	N/A	N/A
PHROG	UHGV-0016973_13	phrog_7838	117.4	1.3e-34	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016973_13	UniRef90_A0A8D9UGW3	169.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0016973_13	742767.HMPREF9456_02052	149.0	7.13962e-42	N/A	N/A
structural_annotation	UHGV-0016973_13	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_15	phrog_6969	73.3	3.1e-21	N/A	unknown function
UniRef90	UHGV-0016973_15	UniRef90_UPI001B593220	100.0	2.17e-21	DnaD domain protein	N/A
COG	UHGV-0016973_15	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0016973_20	K03111	118.8	6.9e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0016973_20	phrog_44	100.5	2e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016973_20	UniRef90_A0A2E1ARW4	105.0	2.33e-26	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0016973_20	865937.Gilli_1434	102.0	4.38e-26	Single-strand binding protein family	N/A
Pfam	UHGV-0016973_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0016973_20	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0016973_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0016973_20	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0016973_20	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_21	phrog_1770	94.8	9.5e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0016973_21	1235788.C802_00065	142.0	1.67007e-41	N/A	N/A
structural_annotation	UHGV-0016973_21	PF02075,MF_00034,NF000711,COG2410	N/A	N/A	N/A	N/A
COG	UHGV-0016973_24	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-0016973_27	phrog_21498	213.1	0	N/A	unknown function
UniRef90	UHGV-0016973_27	UniRef90_R6E8L3	264.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0016973_27	469378.Ccur_02830	159.0	8.46945e-42	DNA binding	N/A
Pfam	UHGV-0016973_27	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0016973_27	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0016973_27	PF02195,PF05869,MF_02015,TIGR04285,TIGR01712,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_29	phrog_72	47.8	0.00000000000026	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0016973_29	1121100.JCM6294_522	126.0	2.05e-35	N/A	N/A
structural_annotation	UHGV-0016973_29	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0016973_31	K06909	186.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0016973_31	phrog_5653	108.5	4.5e-32	terminase large subunit	head and packaging
UniRef90	UHGV-0016973_31	UniRef90_UPI0018AA1D83	354.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0016973_31	742767.HMPREF9456_03236	280.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0016973_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0016973_31	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0016973_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0016973_31	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016973_34	PF19266,PF12245,TIGR02126,COG3499	N/A	N/A	N/A	N/A
Pfam	UHGV-0016973_36	PF01544	N/A	N/A	CorA-like Mg2+ transporter protein	CorA
PHROG	UHGV-0016973_37	phrog_24921	110.6	1.8e-34	N/A	unknown function
UniRef90	UHGV-0016973_37	UniRef90_UPI0018A9D52E	270.0	0	XkdF-like putative serine protease domain-containing protein	N/A
eggNOG-mapper	UHGV-0016973_37	742766.HMPREF9455_00505	86.7	0.00000000000000168	Putative phage serine protease XkdF	N/A
Pfam	UHGV-0016973_37	PF14550	N/A	N/A	Putative phage serine protease XkdF	Peptidase_S78_2
structural_annotation	UHGV-0016973_37	PF14550	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_38	phrog_11320	62.6	1.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0016973_38	742767.HMPREF9456_03253	66.2	0.00000000212	N/A	N/A
structural_annotation	UHGV-0016973_38	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0016973_39	phrog_19091	43.0	0.0000000000054	N/A	unknown function
structural_annotation	UHGV-0016973_39	TIGR01603,COG5437	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0016973	Yes	28,013	50	100	1