vOTU vOTU-042925

vOTU: vOTU-042925

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-042925
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-01325 → vGENUS-01944 → vSUBGEN-26722 → vOTU-042925
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → CAG-1024 → CAG-1024 sp000432015
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0017024
Biosample ID	SAMEA4766126
Genome length (bp)	51,864 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	93.86%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → CAG-1024 → CAG-1024 sp000432015	Total connections	15	Host agreement	80
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0017024_2	UniRef90_A0A7M1RS47	71.2	0.0000000000011	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0017024_2	1408437.JNJN01000043_gene801	78.6	8.32e-16	N/A	N/A
KOfam	UHGV-0017024_3	K14059	165.0	0	int; integrase	N/A
PHROG	UHGV-0017024_3	phrog_1	162.1	0	integrase	integration and excision
UniRef90	UHGV-0017024_3	UniRef90_A0A3D3Y5E0	738.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0017024_3	693746.OBV_41260	293.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0017024_3	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0017024_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0017024_3	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0017024_3	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017024_4	UniRef90_A0A3D3Y4M8	355.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0017024_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0017024_4	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0017024_5	K19167	52.4	0.000000000000012	abiQ; protein AbiQ	N/A
PHROG	UHGV-0017024_5	phrog_8049	82.0	4.9e-24	N/A	unknown function
UniRef90	UHGV-0017024_5	UniRef90_A0A2S6FUC3	102.0	6.39e-25	Protein AbiQ	N/A
eggNOG-mapper	UHGV-0017024_5	1095747.HMPREF1049_1829	112.0	6.99e-30	N/A	N/A
AcrCatalog	UHGV-0017024_5	cluster_9537	120.0	1.39e-37	NA	N/A
eggNOG-mapper	UHGV-0017024_6	1131462.DCF50_p2449	55.1	0.00000759	Bacterial Ig-like domain 2	N/A
NCBIFam	UHGV-0017024_6	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-0017024_6	COG5492	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017024_7	UniRef90_A0A3C1K3F5	58.2	0.0000000188	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-0017024_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0017024_7	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0017024_8	K22300	53.0	0.0000000000000069	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0017024_8	phrog_8	48.6	0.00000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-0017024_8	UniRef90_A0A3D3Y6C1	71.2	0.00000000000000403	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0017024_8	1226322.HMPREF1545_02925	51.6	0.000000655	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0017024_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0017024_8	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0017024_8	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_13	phrog_4973	63.6	2.6e-18	N/A	unknown function
UniRef90	UHGV-0017024_13	UniRef90_UPI001D0904CC	99.4	1.14e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0017024_13	935261.JAGL01000009_gene1175	47.4	0.00000499	Helix-turn-helix domain	N/A
Pfam	UHGV-0017024_13	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0017024_13	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_15	phrog_155	148.7	3.08286e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017024_15	UniRef90_UPI00130EB09C	201.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0017024_15	748224.HMPREF9436_03360	172.0	0	ERF superfamily	N/A
Pfam	UHGV-0017024_15	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0017024_15	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_16	phrog_72	57.8	1.9e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017024_16	UniRef90_UPI001F3F3E5C	163.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0017024_16	445972.ANACOL_01825	123.0	3.83e-33	N/A	N/A
structural_annotation	UHGV-0017024_16	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0017024_18	K03111	134.5	1.1e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0017024_18	phrog_44	143.1	1.49939e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017024_18	UniRef90_A0A2V2CEG7	191.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0017024_18	693746.OBV_19910	174.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0017024_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0017024_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0017024_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0017024_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0017024_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_19	phrog_16304	105.7	4.9e-31	N/A	unknown function
UniRef90	UHGV-0017024_19	UniRef90_UPI001C10203E	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-0017024_19	1007096.BAGW01000033_gene1617	94.4	4.34e-21	ROK family	N/A
Pfam	UHGV-0017024_19	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0017024_19	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0017024_19	PF19808	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017024_20	1444310.JANV01000162_gene1216	133.0	1.41e-34	N/A	N/A
KOfam	UHGV-0017024_22	K01160	49.3	0.00000000000012	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
UniRef90	UHGV-0017024_22	UniRef90_A0A1V5ZUM0	114.0	4.02e-30	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-0017024_22	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0017024_23	K00571	124.9	7.4e-37	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0017024_23	phrog_67	100.3	8.5e-30	DNA methyltransferase	other
UniRef90	UHGV-0017024_23	UniRef90_A0A2U1CFM2	425.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0017024_23	658655.HMPREF0988_00878	372.0	0	DNA methylase	N/A
PADLOC	UHGV-0017024_23	MTase_II_00157	91.5	1.5e-26	Type II methyltransferase	RM
Pfam	UHGV-0017024_23	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0017024_23	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0017024_23	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0017024_25	K00390	95.5	4.9e-28	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0017024_25	phrog_424	108.6	5.1e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0017024_25	UniRef90_A0A3D3Y454	483.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0017024_25	1408437.JNJN01000032_gene2312	331.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0017024_25	BrxP_00001	77.2	2.6e-23	BrxP	BREX
Pfam	UHGV-0017024_25	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0017024_25	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0017024_25	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_27	phrog_5781	80.8	1.5e-23	N/A	unknown function
UniRef90	UHGV-0017024_27	UniRef90_A0A810Q4L2	118.0	1.68e-32	N/A	N/A
eggNOG-mapper	UHGV-0017024_27	573061.Clocel_3558	97.8	4.3e-25	N/A	N/A
Pfam	UHGV-0017024_27	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0017024_27	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0017024_27	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
COG	UHGV-0017024_30	COG1315	N/A	N/A	Flagellar assembly protein FapA, interacts with EIIAGlc	N/A
PHROG	UHGV-0017024_31	phrog_2118	94.3	1.5e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017024_31	UniRef90_A0A417HX51	207.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0017024_31	742740.HMPREF9474_03129	116.0	4.03e-32	HNH endonuclease	N/A
Pfam	UHGV-0017024_31	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0017024_31	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0017024_31	TIGR02646,COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017024_34	UniRef90_A0A374AB28	176.0	0	Thymidylate synthase ThyX	N/A
eggNOG-mapper	UHGV-0017024_34	935948.KE386495_gene2250	94.0	7.76e-22	N/A	N/A
Pfam	UHGV-0017024_34	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0017024_34	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_37	phrog_801	80.1	3e-23	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0017024_37	UniRef90_A0A2K9P078	108.0	7.18e-29	N/A	N/A
Pfam	UHGV-0017024_37	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0017024_37	PF18909	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017024_38	1134413.ANNK01000120_gene2036	60.8	0.000000000839	N/A	N/A
NCBIFam	UHGV-0017024_38	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0017024_38	PF05263,TIGR01636,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_39	phrog_25567	48.2	0.00000000000009	N/A	unknown function
COG	UHGV-0017024_39	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
PHROG	UHGV-0017024_42	phrog_38	350.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0017024_42	UniRef90_A0A845QMQ7	471.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0017024_42	755731.Clo1100_2438	400.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0017024_42	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0017024_42	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0017024_42	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0017024_42	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0017024_42	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_44	phrog_156	114.5	6.7e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-0017024_44	693746.OBV_01670	249.0	0	N/A	N/A
structural_annotation	UHGV-0017024_44	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_46	phrog_422	202.9	0	major head protein	head and packaging
UniRef90	UHGV-0017024_46	UniRef90_UPI00124590F3	295.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0017024_46	755731.Clo1100_2434	267.0	0	N/A	N/A
structural_annotation	UHGV-0017024_46	PF19821,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_47	phrog_13046	53.9	0.0000000000000026	N/A	unknown function
structural_annotation	UHGV-0017024_47	PF20387	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017024_48	UniRef90_A0A847CX66	221.0	0	N/A	N/A
eggNOG-mapper	UHGV-0017024_48	871968.DESME_08885	127.0	5.64e-28	N/A	N/A
structural_annotation	UHGV-0017024_48	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
COG	UHGV-0017024_49	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
KOfam	UHGV-0017024_50	K16628	118.5	1.8e-35	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0017024_50	phrog_819	111.0	4.00001e-40	tail protein	tail
eggNOG-mapper	UHGV-0017024_50	1519439.JPJG01000060_gene1892	88.6	0.00000000000000239	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0017024_50	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0017024_50	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0017024_51	phrog_35892	57.9	2e-28	N/A	unknown function
UniRef90	UHGV-0017024_51	UniRef90_A0A843FMD8	187.0	0	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-0017024_51	471875.RUMLAC_02240	158.0	7.03003e-41	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-0017024_51	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-0017024_51	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-0017024_51	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017024_51	PF13306,NF041351	N/A	N/A	N/A	N/A
KOfam	UHGV-0017024_53	K18454	43.9	0.0000000000029	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0017024_53	phrog_30034	71.9	1e-20	N/A	unknown function
UniRef90	UHGV-0017024_53	UniRef90_A0A1C5VT90	145.0	2.26029e-42	Chitinase A1	N/A
eggNOG-mapper	UHGV-0017024_53	1235796.C815_00903	126.0	8.83e-35	N/A	N/A
Pfam	UHGV-0017024_53	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0017024_53	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_54	phrog_937	57.8	2.2e-16	hemolysin	other
eggNOG-mapper	UHGV-0017024_54	1519439.JPJG01000023_gene533	70.9	0.0000000000000102	N/A	N/A
PHROG	UHGV-0017024_56	phrog_355	62.9	4.6e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017024_56	UniRef90_UPI0019572D92	150.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0017024_56	397290.C810_05229	139.0	7.71975e-42	N/A	N/A
Pfam	UHGV-0017024_56	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0017024_56	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0017024_57	phrog_13256	73.1	1.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0017024_57	1226322.HMPREF1545_00166	67.8	0.0000000000000541	N/A	N/A
KOfam	UHGV-0017024_58	K01447	97.1	2.4e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0017024_58	phrog_670	119.0	4.6e-35	endolysin	lysis
UniRef90	UHGV-0017024_58	UniRef90_A0A3D4VSU2	149.0	3.06002e-41	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0017024_58	1203606.HMPREF1526_00589	83.6	9.3e-17	Ami_2	N/A
Pfam	UHGV-0017024_58	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0017024_58	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0017024_58	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
Pfam	UHGV-0017024_60	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-0017024_60	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
COG	UHGV-0017024_60	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0017024_61	PF16509,MF_00245,NF008895,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017024_63	1160721.RBI_I00206	57.0	0.000000000331	N/A	N/A
structural_annotation	UHGV-0017024_63	PF10723	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0017024	Yes	51,864	54	100	1
UHGV-0026615	No	38,988	55	75	1