vOTU vOTU-043195

vOTU: vOTU-043195

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043195
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00486 → vGENUS-05687 → vSUBGEN-16708 → vOTU-043195
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900555735
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020123
Biosample ID	N/A
Genome length (bp)	39,487 bps
CheckV completeness	100.00% (Complete)
CDS count	51
CDS density	93.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900555735	Total connections	50	Host agreement	86
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900555735	Total connections	8	Host agreement	87.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0020123_1	1408437.JNJN01000002_gene1389	63.5	0.000000000413	N/A	N/A
PHROG	UHGV-0020123_2	phrog_3287	121.6	5.1e-36	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0020123_2	693746.OBV_23870	783.0	0	N/A	N/A
structural_annotation	UHGV-0020123_2	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020123_3	693746.OBV_23880	158.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0020123_3	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_4	phrog_371	123.1	2.2e-36	major head protein	head and packaging
UniRef90	UHGV-0020123_4	UniRef90_R6TFU9	465.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0020123_4	693746.OBV_23890	409.0	0	N/A	N/A
Pfam	UHGV-0020123_4	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0020123_4	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_5	phrog_24113	79.4	3.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0020123_5	1226322.HMPREF1545_03847	76.3	6.97e-16	N/A	N/A
structural_annotation	UHGV-0020123_5	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_6	phrog_35275	84.0	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0020123_6	693746.OBV_23910	150.0	1.44999e-40	N/A	N/A
structural_annotation	UHGV-0020123_8	NF007241	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_9	phrog_156	238.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0020123_9	693746.OBV_23930	597.0	0	N/A	N/A
structural_annotation	UHGV-0020123_9	PF12236,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0020123_10	K07474	90.0	5.4e-26	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0020123_10	phrog_51	88.0	1.2e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0020123_10	UniRef90_G4KPV4	118.0	6.66e-31	Terminase small subunit family protein	N/A
eggNOG-mapper	UHGV-0020123_10	693746.OBV_23940	118.0	1.12e-31	DNA packaging	N/A
Pfam	UHGV-0020123_10	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0020123_10	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0020123_10	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020123_11	1226322.HMPREF1545_00288	47.8	0.00000969	N/A	N/A
PHROG	UHGV-0020123_12	phrog_3584	141.9	3.39955e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020123_12	1226322.HMPREF1545_03841	126.0	2.76e-32	N/A	N/A
structural_annotation	UHGV-0020123_12	PF01446,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0020123_14	K22300	56.6	3.1e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020123_14	phrog_8	47.9	0.0000000000003	transcriptional regulator	transcription regulation
Pfam	UHGV-0020123_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-0020123_15	UniRef90_A0A174XWS3	70.9	0.0000000000000798	Bacterial regulatory proteins, luxR family	N/A
eggNOG-mapper	UHGV-0020123_15	485916.Dtox_2202	53.5	0.000000731	Plasmid pRiA4b ORF-3-like protein	N/A
Pfam	UHGV-0020123_15	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0020123_15	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020123_16	NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-0020123_18	K01448	64.3	1.9e-18	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0020123_18	phrog_435	84.1	2.2e-24	endolysin	lysis
UniRef90	UHGV-0020123_18	UniRef90_R6GV68	145.0	1.09e-39	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0020123_18	428125.CLOLEP_01588	91.3	2.61e-19	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0020123_18	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0020123_18	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0020123_18	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0020123_18	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_19	phrog_355	58.1	7.7e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020123_19	397290.C810_05229	139.0	5.54001e-40	N/A	N/A
PHROG	UHGV-0020123_20	phrog_2	102.8	5e-30	terminase large subunit	head and packaging
UniRef90	UHGV-0020123_20	UniRef90_R6TQ60	638.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0020123_20	693746.OBV_23980	617.0	0	phage Terminase large subunit	N/A
COG	UHGV-0020123_20	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0020123_20	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_25	phrog_15609	192.4	0	N/A	unknown function
UniRef90	UHGV-0020123_25	UniRef90_UPI001C102D5E	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020123_25	693746.OBV_24000	154.0	7.31996e-41	N/A	N/A
Pfam	UHGV-0020123_25	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0020123_25	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0020123_25	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_26	phrog_8470	217.2	0	N/A	unknown function
UniRef90	UHGV-0020123_26	UniRef90_UPI00195E492B	434.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0020123_26	1378168.N510_01842	403.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0020123_26	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0020123_26	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_27	phrog_38338	73.2	4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0020123_27	693746.OBV_24020	95.1	1.36e-23	N/A	N/A
structural_annotation	UHGV-0020123_31	PF15591,MF_01549,NF007981	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020123_32	693746.OBV_21850	52.8	0.0000000195	N/A	N/A
structural_annotation	UHGV-0020123_33	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_35	phrog_14088	47.0	0.00000000000027	N/A	unknown function
UniRef90	UHGV-0020123_35	UniRef90_A0A3E5GTA5	63.5	0.00000000000409	Carboxypeptidase	N/A
eggNOG-mapper	UHGV-0020123_35	626523.GCWU000342_01045	62.8	0.0000000000012	N/A	N/A
KOfam	UHGV-0020123_39	K18830	73.8	3.5e-21	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0020123_39	phrog_4	59.9	6.3e-17	transcriptional repressor	transcription regulation
UniRef90	UHGV-0020123_39	UniRef90_A0A2U1BEG8	153.0	1.4013e-45	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0020123_39	445972.ANACOL_03315	143.0	1.32983e-42	N/A	N/A
Pfam	UHGV-0020123_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020123_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020123_39	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0020123_41	K07729	57.0	4.5e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0020123_41	phrog_5823	47.7	0.00000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020123_41	UniRef90_A0A810QAJ3	61.6	0.0000000000415	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020123_41	477974.Daud_0777	56.2	0.00000000179	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-0020123_41	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0020123_41	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0020123_42	K14059	150.3	2.10195e-44	int; integrase	N/A
PHROG	UHGV-0020123_42	phrog_1	149.4	2.66247e-44	integrase	integration and excision
UniRef90	UHGV-0020123_42	UniRef90_UPI001EDEB0AD	283.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0020123_42	1226322.HMPREF1545_00144	234.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0020123_42	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0020123_42	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0020123_42	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_44	phrog_14770	61.5	5.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-0020123_44	445971.ANASTE_00728	343.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-0020123_44	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0020123_44	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0020123_44	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
Pfam	UHGV-0020123_45	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
PHROG	UHGV-0020123_46	phrog_1129	66.4	3e-19	holin	lysis
UniRef90	UHGV-0020123_46	UniRef90_A0A8D9PDD4	148.0	8.40779e-45	Holin	N/A
eggNOG-mapper	UHGV-0020123_46	1007096.BAGW01000036_gene2663	110.0	1.11e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0020123_46	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0020123_46	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_47	phrog_1863	70.6	6.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0020123_47	1226322.HMPREF1545_04027	104.0	2.31e-28	N/A	N/A
KOfam	UHGV-0020123_48	K03651	62.9	4.9e-18	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-0020123_48	phrog_7158	120.0	1.7e-35	N/A	unknown function
UniRef90	UHGV-0020123_48	UniRef90_A0A1E8F0N5	103.0	4.94e-20	3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA	N/A
eggNOG-mapper	UHGV-0020123_48	1151292.QEW_0668	63.9	0.0000000717	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0020123_48	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0020123_48	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0020123_48	PF14582,MF_00905,NF008359,COG2129	N/A	N/A	N/A	N/A
PHROG	UHGV-0020123_51	phrog_25979	45.9	0.00000000000041	N/A	unknown function
eggNOG-mapper	UHGV-0020123_51	483218.BACPEC_01141	72.0	0.000000000149	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020123	Yes	39,487	60	100	1
UHGV-0010429	No	41,617	59	100	1
UHGV-0011991	No	40,630	60	100	1
UHGV-0012103	No	39,644	60	100	1
UHGV-0001443	No	39,393	60	100	1
UHGV-0002941	No	39,393	60	100	1
UHGV-0000913	No	35,160	61	91	1
UHGV-0002963	No	21,682	61	57	1