vOTU vOTU-043273

vOTU: vOTU-043273

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-043273
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00102 → vSUBFAM-00709 → vGENUS-00656 → vSUBGEN-22659 → vOTU-043273
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → ERR7738581_bin.237
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0021171
Biosample ID	N/A
Genome length (bp)	58,859 bps
CheckV completeness	100.00% (Complete)
CDS count	85
CDS density	92.70%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → ERR7738581_bin.237	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0021171_4	K22300	62.5	9.1e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0021171_4	phrog_4	48.9	0.00000000000015	transcriptional repressor	transcription regulation
UniRef90	UHGV-0021171_4	UniRef90_R9K5V7	97.8	6.58e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0021171_4	397290.C810_05152	97.8	1.1e-24	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0021171_4	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0021171_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0021171_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0021171_5	K22300	80.2	3.1e-23	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0021171_5	phrog_8	60.9	2.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021171_5	UniRef90_A0A8B5W9C9	66.2	0.0000000000126	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0021171_5	416870.llmg_0008	62.8	0.000000000029	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0021171_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021171_5	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0021171_6	K07729	57.8	2.3e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0021171_6	phrog_8	49.8	0.00000000000006	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021171_6	UniRef90_A0A1I3CXA4	60.1	0.00000000481	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0021171_6	411460.RUMTOR_01319	65.5	0.000000000136	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0021171_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021171_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0021171_6	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_8	phrog_3292	49.6	0.000000000000058	N/A	unknown function
UniRef90	UHGV-0021171_8	UniRef90_A0A5B0C3F0	52.8	0.000000506	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0021171_8	1117319.PSPO_09654	64.3	0.000000000137	KTSC domain	N/A
Pfam	UHGV-0021171_8	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0021171_8	COG1190	N/A	N/A	Lysyl-tRNA synthetase (class II)	N/A
structural_annotation	UHGV-0021171_8	PF13619	N/A	N/A	N/A	N/A
KOfam	UHGV-0021171_9	K07729	42.1	3.8e-24	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0021171_9	phrog_8	59.4	4.8e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0021171_9	401473.BDP_1637	63.9	0.00000000077	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0021171_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0021171_9	PF01381,NF041951,COG1476,COG4068	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021171_10	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_15	phrog_606	45.6	0.000000000001	terminase small subunit	head and packaging
UniRef90	UHGV-0021171_15	UniRef90_UPI001D02F64C	86.3	1.77e-18	DNA-packaging protein	N/A
Pfam	UHGV-0021171_15	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0021171_15	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0021171_16	K06909	287.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0021171_16	phrog_3717	208.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0021171_16	UniRef90_A0A3S1ABC6	472.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0021171_16	696281.Desru_1088	449.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0021171_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0021171_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0021171_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0021171_16	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_19	phrog_156	108.8	4.6e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0021171_19	588581.Cpap_1526	283.0	0	N/A	N/A
structural_annotation	UHGV-0021171_19	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_21	phrog_14242	95.1	4.9e-28	major head protein	head and packaging
UniRef90	UHGV-0021171_21	UniRef90_A0A3D2CI53	321.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0021171_21	935948.KE386495_gene2267	59.7	0.000000693	N/A	N/A
NCBIFam	UHGV-0021171_21	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0021171_21	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021171_23	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021171_24	1449126.JQKL01000002_gene1688	94.7	4.9e-18	N/A	N/A
structural_annotation	UHGV-0021171_24	PF11134,NF038128,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_27	phrog_3904	42.8	7.2e-16	tail fiber protein	tail
eggNOG-mapper	UHGV-0021171_27	1429768.W6AS29_9CAUD	65.1	0.0000000346	N-acetylmuramoyl-L-alanine amidase activity	N/A
structural_annotation	UHGV-0021171_27	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_28	phrog_13589	41.8	0.0000000000059	N/A	unknown function
eggNOG-mapper	UHGV-0021171_28	411471.SUBVAR_06929	62.0	0.00000000336	ATPase involved in DNA repair	N/A
COG	UHGV-0021171_28	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
UniRef90	UHGV-0021171_29	UniRef90_UPI00164D57E4	113.0	1.3e-25	N/A	N/A
eggNOG-mapper	UHGV-0021171_29	931626.Awo_c11420	67.4	0.000000000991	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-0021171_29	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0021171_29	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021171_29	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021171_30	1298920.KI911353_gene541	64.7	0.00000000208	ATPase involved in DNA repair	N/A
COG	UHGV-0021171_30	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
COG	UHGV-0021171_33	COG3306	N/A	N/A	Glycosyltransferase involved in LPS biosynthesis, GR25 family	N/A
structural_annotation	UHGV-0021171_33	PF03071,NF038299,COG3306	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_35	phrog_4105	70.7	1.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0021171_35	610130.Closa_0762	77.4	4.64e-17	N/A	N/A
KOfam	UHGV-0021171_36	K19304	111.7	8.3e-33	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0021171_36	phrog_7767	102.3	2.6e-30	metallo-endopeptidase	other
UniRef90	UHGV-0021171_36	UniRef90_A0A353WR18	78.6	0.00000000000168	Metalloendopeptidase	N/A
eggNOG-mapper	UHGV-0021171_36	1449126.JQKL01000043_gene1877	103.0	4.54e-23	Peptidase family M23	N/A
Pfam	UHGV-0021171_36	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0021171_36	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0021171_36	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021171_38	693746.OBV_19020	63.5	0.00000000000328	N/A	N/A
PHROG	UHGV-0021171_40	phrog_3754	107.3	1.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0021171_40	476272.RUMHYD_01764	165.0	0	N/A	N/A
PHROG	UHGV-0021171_41	phrog_21718	117.4	9.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-0021171_41	397290.C810_05210	92.0	2.09e-21	N/A	N/A
PHROG	UHGV-0021171_42	phrog_22984	73.3	2.8e-21	N/A	unknown function
PHROG	UHGV-0021171_43	phrog_16490	118.6	8.5e-36	N/A	unknown function
eggNOG-mapper	UHGV-0021171_43	658655.HMPREF0988_00917	91.7	3.18e-19	N/A	N/A
PHROG	UHGV-0021171_44	phrog_20016	199.0	0	N/A	unknown function
UniRef90	UHGV-0021171_44	UniRef90_A0A2Z4QB67	188.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0021171_44	1226322.HMPREF1545_00077	177.0	0	N/A	N/A
structural_annotation	UHGV-0021171_44	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021171_45	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0021171_47	K14060	125.7	4.2e-37	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0021171_47	phrog_125	165.9	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_47	UniRef90_A0A1I4I5E9	175.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0021171_47	1408312.JNJS01000002_gene68	175.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0021171_47	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0021171_47	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0021171_47	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_48	phrog_2172	133.7	9.39999e-40	N/A	unknown function
UniRef90	UHGV-0021171_48	UniRef90_W1I4H7	171.0	0	Uncultured bacterium plasmid pRGI00071	N/A
eggNOG-mapper	UHGV-0021171_48	1408311.JNJM01000024_gene619	148.0	1.20999e-40	Initiator Replication protein	N/A
Pfam	UHGV-0021171_48	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0021171_48	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0021171_48	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0021171_48	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
Pfam	UHGV-0021171_50	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
PHROG	UHGV-0021171_53	phrog_14770	96.2	0	N/A	unknown function
UniRef90	UHGV-0021171_53	UniRef90_UPI001BB47D0E	1458.0	0	strawberry notch family protein	N/A
eggNOG-mapper	UHGV-0021171_53	1123288.SOV_4c02780	1085.0	0	protein secretion by the type IV secretion system	N/A
Pfam	UHGV-0021171_53	PF13872	N/A	N/A	P-loop containing NTP hydrolase pore-1	AAA_34
Pfam	UHGV-0021171_53	PF13871	N/A	N/A	C-terminal domain on Strawberry notch homologue	Helicase_C_4
Pfam	UHGV-0021171_53	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0021171_53	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-0021171_57	K03111	131.3	1.1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0021171_57	phrog_44	127.1	1.7e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_57	UniRef90_R5QD10	140.0	2e-39	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0021171_57	445972.ANACOL_04434	125.0	3.52e-34	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0021171_57	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0021171_57	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0021171_57	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0021171_57	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0021171_57	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0021171_58	K01160	40.6	0.000000000056	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0021171_58	phrog_4632	51.7	8.8e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_58	UniRef90_A0A7X8IB41	107.0	1.18e-27	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0021171_58	469604.HMPREF0946_01097	62.8	0.0000000000616	N/A	N/A
structural_annotation	UHGV-0021171_58	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_59	phrog_474	94.7	1.5e-27	phosphofructokinase	other
UniRef90	UHGV-0021171_59	UniRef90_A0A3E2XXK5	93.2	2.06e-22	N/A	N/A
eggNOG-mapper	UHGV-0021171_59	1095750.HMPREF9970_1026	84.7	6.5e-20	N/A	N/A
Pfam	UHGV-0021171_59	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0021171_59	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-0021171_61	K01520	129.8	2.2e-38	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0021171_61	phrog_135	118.0	6e-35	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_61	UniRef90_UPI00164A78A3	158.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0021171_61	1282887.AUJG01000016_gene1113	144.0	1.98003e-41	N/A	N/A
Pfam	UHGV-0021171_61	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0021171_61	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0021171_61	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0021171_61	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021171_63	PF09947	N/A	N/A	N/A	N/A
KOfam	UHGV-0021171_64	K07451	63.2	1.9e-18	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0021171_64	phrog_1271	69.4	7.1e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_64	UniRef90_U4R634	129.0	6.14e-35	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0021171_64	394503.Ccel_3167	130.0	3.62e-36	N/A	N/A
Pfam	UHGV-0021171_64	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-0021171_64	PF01844	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021171_65	UniRef90_E9SEU0	60.8	0.0000000052	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0021171_65	246199.CUS_4828	60.8	0.000000000872	N/A	N/A
UniRef90	UHGV-0021171_66	UniRef90_UPI001C009709	127.0	5.89e-36	N/A	N/A
Pfam	UHGV-0021171_66	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0021171_66	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021171_69	UniRef90_A0A098GES5	97.8	1.32e-24	Putative phage associated protein	N/A
structural_annotation	UHGV-0021171_69	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_75	phrog_9804	109.2	3.5e-32	N/A	unknown function
UniRef90	UHGV-0021171_75	UniRef90_A0A3D1LDS2	110.0	4.07e-27	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0021171_75	1499683.CCFF01000013_gene503	82.0	9.65e-17	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0021171_75	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0021171_75	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_76	phrog_270	100.7	1.7e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0021171_76	941770.GL622178_gene367	90.1	5.76e-19	Replication initiation and membrane attachment	N/A
COG	UHGV-0021171_76	COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_77	phrog_72	61.2	1.3e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_77	UniRef90_A0A8D9PDS2	164.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0021171_77	445972.ANACOL_01825	138.0	4.76e-39	N/A	N/A
structural_annotation	UHGV-0021171_77	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_78	phrog_2205	117.1	9.4e-35	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_78	UniRef90_A0A4R7KUW2	95.9	1.27e-21	Gam-like protein	N/A
eggNOG-mapper	UHGV-0021171_78	1203606.HMPREF1526_01878	85.5	4.02e-18	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0021171_78	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-0021171_78	PF07352	N/A	N/A	N/A	N/A
PHROG	UHGV-0021171_80	phrog_7838	145.7	2.8026e-43	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021171_80	UniRef90_A0A8D9UGW3	212.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0021171_80	742767.HMPREF9456_02052	165.0	0	N/A	N/A
structural_annotation	UHGV-0021171_80	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0021171	Yes	58,859	50	100	1